RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 FMC1Q96HJ9 113 aa9.35□□□□□ -0.91
LIMK2-202ENST00000333611 CARD19Q96LW7 228 aa9.35□□□□□ -0.91
LIMK2-202ENST00000333611 RASL11BQ9BPW5 248 aa9.35□□□□□ -0.91
LIMK2-202ENST00000333611 MSRB1Q9NZV6 116 aa9.35□□□□□ -0.91
LIMK2-202ENST00000333611 RAXQ9Y2V3 346 aa9.35□□□□□ -0.91
LIMK2-202ENST00000333611 CEP295Q9C0D2 2601 aa9.35□□□□□ -0.91
LIMK2-202ENST00000333611 LYNX1G3V0Z9 82 aa9.35□□□□□ -0.91
LIMK2-202ENST00000333611 LYNX1P0DP58 116 aa9.35□□□□□ -0.91
LIMK2-202ENST00000333611 RPL27AP46776 148 aaKnown RBP9.35□□□□□ -0.91
LIMK2-202ENST00000333611 Q86TA4 180 aa9.35□□□□□ -0.91
LIMK2-202ENST00000333611 PHLDA1Q8WV24 401 aaPredicted RBP9.35□□□□□ -0.91
LIMK2-202ENST00000333611 TLN1Q9Y490 2541 aaKnown RBP9.35□□□□□ -0.91
LIMK2-202ENST00000333611 HAX1O00165 279 aa9.35□□□□□ -0.91
LIMK2-202ENST00000333611 FCN3O75636 299 aa9.35□□□□□ -0.91
LIMK2-202ENST00000333611 GAS8-AS1O95177 125 aa9.35□□□□□ -0.91
LIMK2-202ENST00000333611 TMEM75Q8N9X5 138 aa9.35□□□□□ -0.91
LIMK2-202ENST00000333611 C8orf49Q96NF6 230 aa9.35□□□□□ -0.91
LIMK2-202ENST00000333611 IGKV1D-37A0A075B6S9 117 aa9.34□□□□□ -0.91
LIMK2-202ENST00000333611 TRAV8-4A0A0B4J246 113 aa9.34□□□□□ -0.91
LIMK2-202ENST00000333611 CFAP126Q5VTH2 177 aa9.34□□□□□ -0.91
LIMK2-202ENST00000333611 NOTCH3Q9UM47 2321 aa9.34□□□□□ -0.91
LIMK2-202ENST00000333611 IGHV3-35A0A0C4DH35 117 aa9.34□□□□□ -0.91
LIMK2-202ENST00000333611 NHLRC4P0CG21 123 aaPredicted RBP9.34□□□□□ -0.91
LIMK2-202ENST00000333611 ZNF883P0CG24 379 aa9.34□□□□□ -0.91
LIMK2-202ENST00000333611 POU2AF1Q16633 256 aa9.34□□□□□ -0.91
LIMK2-202ENST00000333611 LYRM7Q5U5X0 104 aa9.34□□□□□ -0.91
LIMK2-202ENST00000333611 C17orf77Q96MU5 243 aa9.34□□□□□ -0.91
LIMK2-202ENST00000333611 C9orf153Q5TBE3 101 aa9.33□□□□□ -0.92
LIMK2-202ENST00000333611 IGFL4Q6B9Z1 124 aa9.33□□□□□ -0.92
LIMK2-202ENST00000333611 TRPT1Q86TN4 253 aaKnown RBP9.33□□□□□ -0.92
LIMK2-202ENST00000333611 Q8TAT8 98 aa9.33□□□□□ -0.92
LIMK2-202ENST00000333611 EDA2RQ9HAV5 297 aa9.33□□□□□ -0.92
LIMK2-202ENST00000333611 HIGD1AQ9Y241 93 aa9.33□□□□□ -0.92
LIMK2-202ENST00000333611 RAB1BQ9H0U4 201 aa9.33□□□□□ -0.92
LIMK2-202ENST00000333611 PRO0461Q9UI25 63 aa9.33□□□□□ -0.92
LIMK2-202ENST00000333611 TCL1BO95988 128 aa9.33□□□□□ -0.92
LIMK2-202ENST00000333611 KLHL30-AS1Q8NEE0 82 aa9.33□□□□□ -0.92
LIMK2-202ENST00000333611 KLK5Q9Y337 293 aaPredicted RBP9.33□□□□□ -0.92
LIMK2-202ENST00000333611 CGB1A6NKQ9 187 aa9.32□□□□□ -0.92
LIMK2-202ENST00000333611 HERVK_113P61574 105 aa9.32□□□□□ -0.92
LIMK2-202ENST00000333611 FAM104BQ5XKR9 115 aa9.32□□□□□ -0.92
LIMK2-202ENST00000333611 ZNF492Q9P255 531 aa9.32□□□□□ -0.92
LIMK2-202ENST00000333611 RAI1Q7Z5J4 1906 aaPredicted RBP9.32□□□□□ -0.92
LIMK2-202ENST00000333611 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.32□□□□□ -0.921e-6■■■■□ 21.4
LIMK2-202ENST00000333611 TRAV2A0A0B4J234 112 aa9.32□□□□□ -0.92
LIMK2-202ENST00000333611 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
LIMK2-202ENST00000333611 RS1O15537 224 aa9.32□□□□□ -0.92
LIMK2-202ENST00000333611 SLC25A20O43772 301 aa9.32□□□□□ -0.92
LIMK2-202ENST00000333611 TMEM167AQ8TBQ9 72 aa9.32□□□□□ -0.92
LIMK2-202ENST00000333611 TM4SF5O14894 197 aa9.32□□□□□ -0.92
LIMK2-202ENST00000333611 LINC00694P0DN24 101 aa9.32□□□□□ -0.92
LIMK2-202ENST00000333611 ZNF833PQ6ZTB9 187 aa9.32□□□□□ -0.92
LIMK2-202ENST00000333611 FAM215AQ9Y5M1 114 aa9.32□□□□□ -0.92
LIMK2-202ENST00000333611 IGHV3-23P01764 117 aa9.31□□□□□ -0.92
LIMK2-202ENST00000333611 TMEM78Q5T7P6 136 aa9.31□□□□□ -0.92
LIMK2-202ENST00000333611 CSMD1Q96PZ7 3565 aa9.31□□□□□ -0.92
LIMK2-202ENST00000333611 K7EM74 188 aa9.31□□□□□ -0.92
LIMK2-202ENST00000333611 BSPH1Q075Z2 132 aa9.31□□□□□ -0.92
LIMK2-202ENST00000333611 OR11H6Q8NGC7 330 aa9.31□□□□□ -0.92
LIMK2-202ENST00000333611 CEACAM4O75871 244 aa9.3□□□□□ -0.92
LIMK2-202ENST00000333611 SLC25A16P16260 332 aa9.3□□□□□ -0.92
LIMK2-202ENST00000333611 ANKHD1Q8IWZ3 2542 aaKnown RBP9.3□□□□□ -0.92
LIMK2-202ENST00000333611 CREBBPQ92793 2442 aa9.3□□□□□ -0.92
LIMK2-202ENST00000333611 IGHV3-64A0A075B6Q5 118 aa9.3□□□□□ -0.92
LIMK2-202ENST00000333611 MYMXA0A1B0GTQ4 84 aa9.3□□□□□ -0.92
LIMK2-202ENST00000333611 C17orf100A8MU93 164 aa9.3□□□□□ -0.92
LIMK2-202ENST00000333611 IGLV3-9A0A075B6K5 115 aa9.3□□□□□ -0.92
LIMK2-202ENST00000333611 C19orf71A6NCJ1 209 aa9.3□□□□□ -0.92
LIMK2-202ENST00000333611 FOXC1Q12948 553 aa9.3□□□□□ -0.92
LIMK2-202ENST00000333611 RHODO00212 210 aa9.29□□□□□ -0.92
LIMK2-202ENST00000333611 PRSS22Q9GZN4 317 aa9.29□□□□□ -0.92
LIMK2-202ENST00000333611 VCX2Q9H322 139 aa9.29□□□□□ -0.92
LIMK2-202ENST00000333611 HIGD1BQ9P298 99 aa9.29□□□□□ -0.92
LIMK2-202ENST00000333611 ZZEF1O43149 2961 aa9.29□□□□□ -0.92
LIMK2-202ENST00000333611 IGKV2-40A0A087WW87 121 aaPredicted RBP9.29□□□□□ -0.92
LIMK2-202ENST00000333611 OOSP1A8MZH6 123 aa9.29□□□□□ -0.92
LIMK2-202ENST00000333611 B9A039 149 aa9.29□□□□□ -0.92
LIMK2-202ENST00000333611 SPRY2O43597 315 aa9.29□□□□□ -0.92
LIMK2-202ENST00000333611 IGKV2D-40P01614 121 aaPredicted RBP9.29□□□□□ -0.92
LIMK2-202ENST00000333611 MORN3Q6PF18 240 aaPredicted RBP9.29□□□□□ -0.92
LIMK2-202ENST00000333611 C7orf69Q9H7B7 122 aa9.29□□□□□ -0.92
LIMK2-202ENST00000333611 TEX49A0A1B0GTD5 131 aa9.29□□□□□ -0.92
LIMK2-202ENST00000333611 CTSZQ9UBR2 303 aa9.29□□□□□ -0.92
LIMK2-202ENST00000333611 ATRXP46100 2492 aa9.28□□□□□ -0.92
LIMK2-202ENST00000333611 LRBAP50851 2863 aa9.28□□□□□ -0.92
LIMK2-202ENST00000333611 MBD3L4A6NDZ8 208 aaPredicted RBP9.28□□□□□ -0.92
LIMK2-202ENST00000333611 MBD3L3A6NE82 208 aaPredicted RBP9.28□□□□□ -0.92
LIMK2-202ENST00000333611 MBD3L5A6NJ08 208 aaPredicted RBP9.28□□□□□ -0.92
LIMK2-202ENST00000333611 ATP5IP56385 69 aaPredicted RBP9.28□□□□□ -0.92
LIMK2-202ENST00000333611 TCF15Q12870 199 aa9.28□□□□□ -0.92
LIMK2-202ENST00000333611 ADIPOQQ15848 244 aa9.28□□□□□ -0.92
LIMK2-202ENST00000333611 MBD3L2Q8NHZ7 208 aaPredicted RBP9.28□□□□□ -0.92
LIMK2-202ENST00000333611 SLC25A39Q9BZJ4 359 aaPredicted RBP9.28□□□□□ -0.92
LIMK2-202ENST00000333611 GFRA4Q9GZZ7 299 aa9.28□□□□□ -0.92
LIMK2-202ENST00000333611 ZNF256Q9Y2P7 627 aaPredicted RBP9.28□□□□□ -0.92
LIMK2-202ENST00000333611 WI2-2373I1.2A0A1W2PRP0 233 aa9.28□□□□□ -0.92
LIMK2-202ENST00000333611 TNFRSF6BO95407 300 aa9.28□□□□□ -0.92
LIMK2-202ENST00000333611 GATA4P43694 442 aa9.28□□□□□ -0.92
LIMK2-202ENST00000333611 CRIP2P52943 208 aaPredicted RBP9.28□□□□□ -0.92
LIMK2-202ENST00000333611 CT83Q5H943 113 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms