RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 LINC01559Q495D7 138 aa18.26■□□□□ 0.51
TSKU-201ENST00000333090 CEND1Q8N111 149 aa18.26■□□□□ 0.51
TSKU-201ENST00000333090 Q8N8P6 123 aa18.26■□□□□ 0.51
TSKU-201ENST00000333090 LINC01560Q8TB33 94 aa18.26■□□□□ 0.51
TSKU-201ENST00000333090 MRPL35Q9NZE8 188 aaKnown RBP18.26■□□□□ 0.51
TSKU-201ENST00000333090 TRGV3P03979 118 aa18.26■□□□□ 0.51
TSKU-201ENST00000333090 MED13LQ71F56 2210 aa18.25■□□□□ 0.51
TSKU-201ENST00000333090 SCGB2A1O75556 95 aa18.25■□□□□ 0.51
TSKU-201ENST00000333090 SMPXQ9UHP9 88 aa18.25■□□□□ 0.51
TSKU-201ENST00000333090 COL6A6A6NMZ7 2263 aa18.25■□□□□ 0.51
TSKU-201ENST00000333090 TRAV26-2A0A0B4J265 109 aa18.24■□□□□ 0.51
TSKU-201ENST00000333090 IGHV3-66A0A0C4DH42 116 aa18.24■□□□□ 0.51
TSKU-201ENST00000333090 TM2D2Q9BX73 214 aa18.24■□□□□ 0.51
TSKU-201ENST00000333090 IGKV3D-20A0A0C4DH25 116 aa18.23■□□□□ 0.51
TSKU-201ENST00000333090 IGLV2-18A0A075B6J9 118 aa18.23■□□□□ 0.51
TSKU-201ENST00000333090 UFC1Q9Y3C8 167 aa18.23■□□□□ 0.51
TSKU-201ENST00000333090 MAPKAPK5-AS1Q8N8E1 139 aa18.22■□□□□ 0.51
TSKU-201ENST00000333090 MYOZ3Q8TDC0 251 aa18.22■□□□□ 0.51
TSKU-201ENST00000333090 C11orf21Q9P2W6 132 aa18.22■□□□□ 0.51
TSKU-201ENST00000333090 IGHV3OR16-13A0A075B7E8 117 aa18.22■□□□□ 0.51
TSKU-201ENST00000333090 IGHV3-74A0A0B4J1X5 117 aa18.22■□□□□ 0.51
TSKU-201ENST00000333090 AGRNO00468 2067 aa18.22■□□□□ 0.51
TSKU-201ENST00000333090 SPTBN4Q9H254 2564 aa18.22■□□□□ 0.51
TSKU-201ENST00000333090 ZFHX3Q15911 3703 aa18.21■□□□□ 0.51
TSKU-201ENST00000333090 ODF3BA8MYP8 253 aa18.21■□□□□ 0.51
TSKU-201ENST00000333090 FAM90A27PA6NNH2 459 aa18.2■□□□□ 0.5
TSKU-201ENST00000333090 LAGE3Q14657 143 aa18.2■□□□□ 0.5
TSKU-201ENST00000333090 CHD8Q9HCK8 2581 aa18.19■□□□□ 0.5
TSKU-201ENST00000333090 SAMD13Q5VXD3 122 aa18.19■□□□□ 0.5
TSKU-201ENST00000333090 IGLL5B9A064 214 aa18.19■□□□□ 0.5
TSKU-201ENST00000333090 PRTN3P24158 256 aa18.19■□□□□ 0.5
TSKU-201ENST00000333090 EFNA4P52798 201 aa18.19■□□□□ 0.5
TSKU-201ENST00000333090 ZNF479Q96JC4 524 aa18.19■□□□□ 0.5
TSKU-201ENST00000333090 AGPAT4-IT1Q9H0P7 198 aa18.19■□□□□ 0.5
TSKU-201ENST00000333090 E9PLD3 99 aa18.18■□□□□ 0.5
TSKU-201ENST00000333090 BUB3O43684 328 aa18.18■□□□□ 0.5
TSKU-201ENST00000333090 WFDC2Q14508 124 aa18.18■□□□□ 0.5
TSKU-201ENST00000333090 CDSNQ15517 529 aa18.18■□□□□ 0.5
TSKU-201ENST00000333090 C15orf32Q32M92 178 aa18.18■□□□□ 0.5
TSKU-201ENST00000333090 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.18■□□□□ 0.5
TSKU-201ENST00000333090 IGHV7-81A0A0B4J1V7 117 aa18.18■□□□□ 0.5
TSKU-201ENST00000333090 GOSR1O95249 250 aa18.18■□□□□ 0.5
TSKU-201ENST00000333090 NRACQ8N912 160 aa18.18■□□□□ 0.5
TSKU-201ENST00000333090 GTSF1LQ9H1H1 148 aa18.18■□□□□ 0.5
TSKU-201ENST00000333090 CLEC3BP05452 202 aa18.17■□□□□ 0.5
TSKU-201ENST00000333090 TMEM11P17152 192 aa18.17■□□□□ 0.5
TSKU-201ENST00000333090 VMO1Q7Z5L0 202 aa18.17■□□□□ 0.5
TSKU-201ENST00000333090 SRSF1Q07955 248 aaKnown RBP eCLIP18.17■□□□□ 0.5
TSKU-201ENST00000333090 FOXI2Q6ZQN5 318 aa18.17■□□□□ 0.5
TSKU-201ENST00000333090 AKAP6Q13023 2319 aa18.17■□□□□ 0.5
TSKU-201ENST00000333090 IGHV3-49A0A0A0MS15 119 aa18.16■□□□□ 0.5
TSKU-201ENST00000333090 HLA-DRB4P13762 266 aa18.16■□□□□ 0.5
TSKU-201ENST00000333090 NBL1P41271 181 aa18.16■□□□□ 0.5
TSKU-201ENST00000333090 CCDC144NLQ6NUI1 221 aa18.16■□□□□ 0.5
TSKU-201ENST00000333090 HIST1H4GQ99525 98 aa18.16■□□□□ 0.5
TSKU-201ENST00000333090 HLA-DRB4X5D2U9 266 aa18.16■□□□□ 0.5
TSKU-201ENST00000333090 SPTBN1Q01082 2364 aaKnown RBP18.16■□□□□ 0.5
TSKU-201ENST00000333090 A0A087WX48 190 aa18.16■□□□□ 0.5
TSKU-201ENST00000333090 RBAKDNA6NC62 111 aa18.16■□□□□ 0.5
TSKU-201ENST00000333090 H3BMG7 143 aa18.16■□□□□ 0.5
TSKU-201ENST00000333090 M0R1W7 72 aa18.16■□□□□ 0.5
TSKU-201ENST00000333090 ZNF207O43670 478 aaKnown RBP18.16■□□□□ 0.5
TSKU-201ENST00000333090 ECSCRQ19T08 205 aa18.16■□□□□ 0.5
TSKU-201ENST00000333090 Q6ZQT7 251 aa18.16■□□□□ 0.5
TSKU-201ENST00000333090 NCOR2Q9Y618 2525 aa18.16■□□□□ 0.5
TSKU-201ENST00000333090 C12orf74Q32Q52 190 aa18.15■□□□□ 0.5
TSKU-201ENST00000333090 SPANXN1Q5VSR9 72 aa18.15■□□□□ 0.5
TSKU-201ENST00000333090 ZFAND3Q9H8U3 227 aa18.15■□□□□ 0.5
TSKU-201ENST00000333090 IGHV7-4-1A0A0J9YVY3 117 aa18.15■□□□□ 0.5
TSKU-201ENST00000333090 TMEM78Q5T7P6 136 aa18.15■□□□□ 0.5
TSKU-201ENST00000333090 AMTNQ6UX39 209 aa18.15■□□□□ 0.5
TSKU-201ENST00000333090 Q8N6K4 173 aa18.15■□□□□ 0.5
TSKU-201ENST00000333090 TIMD4Q96H15 378 aa18.15■□□□□ 0.5
TSKU-201ENST00000333090 VPS13CQ709C8 3753 aa18.15■□□□□ 0.5
TSKU-201ENST00000333090 AZU1P20160 251 aa18.14■□□□□ 0.49
TSKU-201ENST00000333090 SLC50A1Q9BRV3 221 aa18.14■□□□□ 0.49
TSKU-201ENST00000333090 F8W1H4 67 aa18.14■□□□□ 0.49
TSKU-201ENST00000333090 ZNF502Q8TBZ5 544 aa18.14■□□□□ 0.49
TSKU-201ENST00000333090 SPANXB1Q9NS25 103 aaPredicted RBP18.14■□□□□ 0.49
TSKU-201ENST00000333090 MTURNQ8N3F0 131 aa18.13■□□□□ 0.49
TSKU-201ENST00000333090 TSSC4Q9Y5U2 329 aaPredicted RBP18.13■□□□□ 0.49
TSKU-201ENST00000333090 RAB9AP51151 201 aa18.13■□□□□ 0.49
TSKU-201ENST00000333090 SMAGPQ0VAQ4 97 aa18.13■□□□□ 0.49
TSKU-201ENST00000333090 SH2D6Q7Z4S9 175 aa18.13■□□□□ 0.49
TSKU-201ENST00000333090 KLK15Q9H2R5 256 aa18.13■□□□□ 0.49
TSKU-201ENST00000333090 PLNP26678 52 aa18.12■□□□□ 0.49
TSKU-201ENST00000333090 ETDBQ3ZM63 59 aa18.12■□□□□ 0.49
TSKU-201ENST00000333090 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.12■□□□□ 0.49
TSKU-201ENST00000333090 TAL2Q16559 108 aa18.12■□□□□ 0.49
TSKU-201ENST00000333090 CLEC19AQ6UXS0 136 aa18.11■□□□□ 0.49
TSKU-201ENST00000333090 SIGMAR1Q99720 223 aa18.11■□□□□ 0.49
TSKU-201ENST00000333090 CELSR1Q9NYQ6 3014 aa18.11■□□□□ 0.49
TSKU-201ENST00000333090 Q8N9W7 124 aa18.11■□□□□ 0.49
TSKU-201ENST00000333090 CLPSL1A2RUU4 121 aa18.1■□□□□ 0.49
TSKU-201ENST00000333090 H3BVH4 76 aa18.1■□□□□ 0.49
TSKU-201ENST00000333090 TRAV8-2A0A0B4J237 113 aa18.1■□□□□ 0.49
TSKU-201ENST00000333090 PRSS47A8MTI9 375 aa18.1■□□□□ 0.49
TSKU-201ENST00000333090 J3QR89 54 aa18.09■□□□□ 0.49
TSKU-201ENST00000333090 MSRB2Q9Y3D2 182 aa18.09■□□□□ 0.49
TSKU-201ENST00000333090 MAP1AP78559 2803 aaPredicted RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms