RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CD28P10747 220 aa13.41□□□□□ -0.26
RAB39A-201ENST00000320578 RAB4BP61018 213 aa13.41□□□□□ -0.26
RAB39A-201ENST00000320578 HIST3H2BBQ8N257 126 aa13.41□□□□□ -0.26
RAB39A-201ENST00000320578 NOTCH2Q04721 2471 aa13.41□□□□□ -0.26
RAB39A-201ENST00000320578 CRISP2P16562 243 aa13.41□□□□□ -0.26
RAB39A-201ENST00000320578 Q0VG73 95 aa13.41□□□□□ -0.26
RAB39A-201ENST00000320578 GDF5OSQ5U4N7 250 aa13.41□□□□□ -0.26
RAB39A-201ENST00000320578 IGKV3-7A0A075B6H7 116 aa13.4□□□□□ -0.26
RAB39A-201ENST00000320578 DLX4Q92988 240 aaPredicted RBP13.4□□□□□ -0.26
RAB39A-201ENST00000320578 RAX2Q96IS3 184 aa13.4□□□□□ -0.26
RAB39A-201ENST00000320578 ODF3Q96PU9 254 aa13.4□□□□□ -0.26
RAB39A-201ENST00000320578 CSN3P07498 182 aa13.39□□□□□ -0.27
RAB39A-201ENST00000320578 IGLC6P0CF74 106 aa13.39□□□□□ -0.27
RAB39A-201ENST00000320578 PROK1P58294 105 aa13.39□□□□□ -0.27
RAB39A-201ENST00000320578 ZNF575Q86XF7 245 aa13.39□□□□□ -0.27
RAB39A-201ENST00000320578 ZFAND2AQ8N6M9 145 aa13.39□□□□□ -0.27
RAB39A-201ENST00000320578 BORCS7Q96B45 105 aa13.39□□□□□ -0.27
RAB39A-201ENST00000320578 RNF114Q9Y508 228 aa13.39□□□□□ -0.27
RAB39A-201ENST00000320578 TCF21O43680 179 aa13.39□□□□□ -0.27
RAB39A-201ENST00000320578 CTRLP40313 264 aa13.39□□□□□ -0.27
RAB39A-201ENST00000320578 SIGLEC8Q9NYZ4 499 aa13.39□□□□□ -0.27
RAB39A-201ENST00000320578 OTOGQ6ZRI0 2925 aa13.38□□□□□ -0.27
RAB39A-201ENST00000320578 INAFM1C9JVW0 142 aa13.38□□□□□ -0.27
RAB39A-201ENST00000320578 CCL24O00175 119 aa13.38□□□□□ -0.27
RAB39A-201ENST00000320578 ORM1P02763 201 aa13.38□□□□□ -0.27
RAB39A-201ENST00000320578 CAMPP49913 170 aa13.38□□□□□ -0.27
RAB39A-201ENST00000320578 AKR1D1P51857 326 aa13.38□□□□□ -0.27
RAB39A-201ENST00000320578 OR10J3Q5JRS4 329 aa13.38□□□□□ -0.27
RAB39A-201ENST00000320578 CITED2Q99967 270 aaPredicted RBP13.38□□□□□ -0.27
RAB39A-201ENST00000320578 CNFNQ9BYD5 112 aa13.38□□□□□ -0.27
RAB39A-201ENST00000320578 IFITM10A6NMD0 228 aa13.37□□□□□ -0.27
RAB39A-201ENST00000320578 SLAQ13239 276 aa13.37□□□□□ -0.27
RAB39A-201ENST00000320578 WFDC3Q8IUB2 231 aa13.37□□□□□ -0.27
RAB39A-201ENST00000320578 TRAV21A0A0B4J279 112 aa13.36□□□□□ -0.27
RAB39A-201ENST00000320578 F2Z2F3 143 aa13.36□□□□□ -0.27
RAB39A-201ENST00000320578 ZNF705DP0CH99 300 aaPredicted RBP13.36□□□□□ -0.27
RAB39A-201ENST00000320578 ZNF705BP0CI00 300 aaPredicted RBP13.36□□□□□ -0.27
RAB39A-201ENST00000320578 GFI1BQ5VTD9 330 aa13.36□□□□□ -0.27
RAB39A-201ENST00000320578 LYZL1Q6UWQ5 148 aa13.36□□□□□ -0.27
RAB39A-201ENST00000320578 ZNF493Q6ZR52 646 aa13.36□□□□□ -0.27
RAB39A-201ENST00000320578 FER1L6-AS1Q8NA97 138 aa13.36□□□□□ -0.27
RAB39A-201ENST00000320578 TRAV25A0A0B4J276 109 aa13.36□□□□□ -0.27
RAB39A-201ENST00000320578 ARMS2P0C7Q2 107 aa13.36□□□□□ -0.27
RAB39A-201ENST00000320578 ESDP10768 282 aa13.36□□□□□ -0.27
RAB39A-201ENST00000320578 DUX3Q96PT4 197 aa13.36□□□□□ -0.27
RAB39A-201ENST00000320578 MTORP42345 2549 aa13.36□□□□□ -0.27
RAB39A-201ENST00000320578 IGKV3D-20A0A0C4DH25 116 aa13.35□□□□□ -0.27
RAB39A-201ENST00000320578 A0A0J9YX75 114 aa13.35□□□□□ -0.27
RAB39A-201ENST00000320578 A0A1B0GUS0 222 aa13.35□□□□□ -0.27
RAB39A-201ENST00000320578 F6UB75 175 aa13.35□□□□□ -0.27
RAB39A-201ENST00000320578 CRLF1O75462 422 aa13.35□□□□□ -0.27
RAB39A-201ENST00000320578 DUSP14O95147 198 aaKnown RBP13.35□□□□□ -0.27
RAB39A-201ENST00000320578 ZNF688P0C7X2 276 aa13.35□□□□□ -0.27
RAB39A-201ENST00000320578 S100A2P29034 98 aa13.35□□□□□ -0.27
RAB39A-201ENST00000320578 PSMG4Q5JS54 123 aa13.35□□□□□ -0.27
RAB39A-201ENST00000320578 TMSB15BA0A087X1C1 80 aa13.34□□□□□ -0.27
RAB39A-201ENST00000320578 KLLNB2CW77 178 aa13.34□□□□□ -0.27
RAB39A-201ENST00000320578 DEFB114Q30KQ6 69 aa13.34□□□□□ -0.27
RAB39A-201ENST00000320578 EBLN2Q6P2I7 272 aa13.34□□□□□ -0.27
RAB39A-201ENST00000320578 FOXI2Q6ZQN5 318 aa13.34□□□□□ -0.27
RAB39A-201ENST00000320578 C11orf21Q9P2W6 132 aa13.34□□□□□ -0.27
RAB39A-201ENST00000320578 TFPI2P48307 235 aa13.34□□□□□ -0.27
RAB39A-201ENST00000320578 PRR9Q5T870 116 aa13.34□□□□□ -0.27
RAB39A-201ENST00000320578 LINC00518Q8N0U6 118 aa13.34□□□□□ -0.27
RAB39A-201ENST00000320578 DYNLRB2Q8TF09 96 aa13.34□□□□□ -0.27
RAB39A-201ENST00000320578 SELENOKQ9Y6D0 94 aa13.34□□□□□ -0.27
RAB39A-201ENST00000320578 GPX1P07203 203 aa13.33□□□□□ -0.28
RAB39A-201ENST00000320578 SRIP30626 198 aa13.33□□□□□ -0.28
RAB39A-201ENST00000320578 LEPP41159 167 aa13.33□□□□□ -0.28
RAB39A-201ENST00000320578 DEFB1P60022 68 aa13.33□□□□□ -0.28
RAB39A-201ENST00000320578 KIAA1644Q3SXP7 199 aa13.33□□□□□ -0.28
RAB39A-201ENST00000320578 ALKBH7Q9BT30 221 aaPredicted RBP13.33□□□□□ -0.28
RAB39A-201ENST00000320578 SSBP4Q9BWG4 385 aaPredicted RBP13.33□□□□□ -0.28
RAB39A-201ENST00000320578 GRIFINA4D1Z8 144 aa13.32□□□□□ -0.28
RAB39A-201ENST00000320578 C11orf44Q8N8P7 122 aa13.32□□□□□ -0.28
RAB39A-201ENST00000320578 HIST1H2BLQ99880 126 aa13.32□□□□□ -0.28
RAB39A-201ENST00000320578 TP53TG3Q9ULZ0 132 aa13.32□□□□□ -0.28
RAB39A-201ENST00000320578 SMIM6P0DI80 62 aa13.32□□□□□ -0.28
RAB39A-201ENST00000320578 TMEM61Q8N0U2 210 aa13.32□□□□□ -0.28
RAB39A-201ENST00000320578 PACRGQ96M98 296 aaPredicted RBP13.32□□□□□ -0.28
RAB39A-201ENST00000320578 SPAG8Q99932 426 aaPredicted RBP13.32□□□□□ -0.28
RAB39A-201ENST00000320578 LOC102724200A0A096LPH7 203 aaPredicted RBP13.31□□□□□ -0.28
RAB39A-201ENST00000320578 A0A1W2PRX2 142 aa13.31□□□□□ -0.28
RAB39A-201ENST00000320578 A8MTW9 85 aa13.31□□□□□ -0.28
RAB39A-201ENST00000320578 ADARB2-AS1A8MUL3 147 aa13.31□□□□□ -0.28
RAB39A-201ENST00000320578 OR5AL1P0C617 328 aa13.31□□□□□ -0.28
RAB39A-201ENST00000320578 DNLZQ5SXM8 178 aa13.31□□□□□ -0.28
RAB39A-201ENST00000320578 DMRTA1Q5VZB9 504 aa13.31□□□□□ -0.28
RAB39A-201ENST00000320578 BAGE3Q86Y29 109 aa13.31□□□□□ -0.28
RAB39A-201ENST00000320578 TMEM18Q96B42 140 aa13.31□□□□□ -0.28
RAB39A-201ENST00000320578 TPPP3Q9BW30 176 aa13.31□□□□□ -0.28
RAB39A-201ENST00000320578 SNAI2O43623 268 aa13.3□□□□□ -0.28
RAB39A-201ENST00000320578 MED14OSP0DP75 135 aa13.3□□□□□ -0.28
RAB39A-201ENST00000320578 TSPOP30536 169 aa13.3□□□□□ -0.28
RAB39A-201ENST00000320578 NDUFA11Q86Y39 141 aa13.3□□□□□ -0.28
RAB39A-201ENST00000320578 TMEM256Q8N2U0 113 aa13.3□□□□□ -0.28
RAB39A-201ENST00000320578 IGHV4-4A0A075B6R2 117 aa13.29□□□□□ -0.28
RAB39A-201ENST00000320578 OR4C46A6NHA9 309 aa13.29□□□□□ -0.28
RAB39A-201ENST00000320578 AMBPP02760 352 aa13.29□□□□□ -0.28
RAB39A-201ENST00000320578 PDZD11Q5EBL8 140 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms