RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 TRAV9-1A0A075B6T8 112 aa23.28■■□□□ 1.32
NECTIN3-201ENST00000319792 CA1P00915 261 aaPredicted RBP23.28■■□□□ 1.32
NECTIN3-201ENST00000319792 FAM3BP58499 235 aaPredicted RBP23.28■■□□□ 1.32
NECTIN3-201ENST00000319792 TSKUQ8WUA8 353 aa23.28■■□□□ 1.32
NECTIN3-201ENST00000319792 CD33P20138 364 aa23.27■■□□□ 1.32
NECTIN3-201ENST00000319792 TMEM158Q8WZ71 300 aa23.27■■□□□ 1.32
NECTIN3-201ENST00000319792 AGRNO00468 2067 aa23.27■■□□□ 1.32
NECTIN3-201ENST00000319792 A8MTW9 85 aa23.26■■□□□ 1.31
NECTIN3-201ENST00000319792 FABP5P3A8MUU1 101 aa23.26■■□□□ 1.31
NECTIN3-201ENST00000319792 INSL3P51460 131 aa23.26■■□□□ 1.31
NECTIN3-201ENST00000319792 ODF3L2Q3SX64 289 aa23.26■■□□□ 1.31
NECTIN3-201ENST00000319792 OR2D3Q8NGH3 330 aa23.26■■□□□ 1.31
NECTIN3-201ENST00000319792 A0A1W2PPQ1 181 aa23.25■■□□□ 1.31
NECTIN3-201ENST00000319792 A8MWL6 223 aa23.25■■□□□ 1.31
NECTIN3-201ENST00000319792 HLA-DRB4P13762 266 aa23.25■■□□□ 1.31
NECTIN3-201ENST00000319792 RAB5AP20339 215 aa23.25■■□□□ 1.31
NECTIN3-201ENST00000319792 PRR9Q5T870 116 aa23.25■■□□□ 1.31
NECTIN3-201ENST00000319792 HLA-DRB4X5D2U9 266 aa23.25■■□□□ 1.31
NECTIN3-201ENST00000319792 SPATA3Q8NHX4 192 aa23.24■■□□□ 1.31
NECTIN3-201ENST00000319792 BTF3L4Q96K17 158 aa23.24■■□□□ 1.31
NECTIN3-201ENST00000319792 FAM210BQ96KR6 192 aa23.24■■□□□ 1.31
NECTIN3-201ENST00000319792 BEAN1Q3B7T3 259 aa23.23■■□□□ 1.31
NECTIN3-201ENST00000319792 C9orf66Q5T8R8 295 aa23.23■■□□□ 1.31
NECTIN3-201ENST00000319792 C3orf56Q8N813 242 aa23.23■■□□□ 1.31
NECTIN3-201ENST00000319792 GFRA4Q9GZZ7 299 aa23.23■■□□□ 1.31
NECTIN3-201ENST00000319792 FAM231BA6NCW3 169 aa23.23■■□□□ 1.31
NECTIN3-201ENST00000319792 KLLNB2CW77 178 aa23.23■■□□□ 1.31
NECTIN3-201ENST00000319792 CMC4P56277 68 aaPredicted RBP23.23■■□□□ 1.31
NECTIN3-201ENST00000319792 SHISA2Q6UWI4 295 aa23.23■■□□□ 1.31
NECTIN3-201ENST00000319792 WFDC9Q8NEX5 89 aa23.23■■□□□ 1.31
NECTIN3-201ENST00000319792 KNCNA6PVL3 124 aa23.22■■□□□ 1.31
NECTIN3-201ENST00000319792 LEPP41159 167 aa23.22■■□□□ 1.31
NECTIN3-201ENST00000319792 C12orf54Q6X4T0 127 aa23.22■■□□□ 1.31
NECTIN3-201ENST00000319792 FAM110AQ9BQ89 295 aa23.22■■□□□ 1.31
NECTIN3-201ENST00000319792 H3BMM0 161 aa23.21■■□□□ 1.31
NECTIN3-201ENST00000319792 TYMSP04818 313 aa23.21■■□□□ 1.31
NECTIN3-201ENST00000319792 TCL1AP56279 114 aa23.21■■□□□ 1.31
NECTIN3-201ENST00000319792 AMTNQ6UX39 209 aa23.21■■□□□ 1.31
NECTIN3-201ENST00000319792 NEU1Q99519 415 aa23.21■■□□□ 1.31
NECTIN3-201ENST00000319792 FBN1P35555 2871 aaKnown RBP23.2■■□□□ 1.31
NECTIN3-201ENST00000319792 TMEM189A5PLL7 270 aa23.2■■□□□ 1.3
NECTIN3-201ENST00000319792 RPL19P84098 196 aaKnown RBP23.2■■□□□ 1.3
NECTIN3-201ENST00000319792 LINC01559Q495D7 138 aa23.2■■□□□ 1.3
NECTIN3-201ENST00000319792 ACTL10Q5JWF8 245 aa23.2■■□□□ 1.3
NECTIN3-201ENST00000319792 NAT8BQ9UHF3 227 aa23.2■■□□□ 1.3
NECTIN3-201ENST00000319792 GPX1P07203 203 aa23.19■■□□□ 1.3
NECTIN3-201ENST00000319792 Q6AWC8 147 aa23.19■■□□□ 1.3
NECTIN3-201ENST00000319792 MCRIP2Q9BUT9 160 aaKnown RBP23.19■■□□□ 1.3
NECTIN3-201ENST00000319792 OR11H12B2RN74 326 aa23.18■■□□□ 1.3
NECTIN3-201ENST00000319792 RPS20P60866 119 aaKnown RBP23.18■■□□□ 1.3
NECTIN3-201ENST00000319792 ZNF124Q15973 351 aa23.18■■□□□ 1.3
NECTIN3-201ENST00000319792 GTSF1Q8WW33 167 aa23.18■■□□□ 1.3
NECTIN3-201ENST00000319792 CLUHP3Q96NS8 147 aa23.18■■□□□ 1.3
NECTIN3-201ENST00000319792 VWFP04275 2813 aa23.17■■□□□ 1.3
NECTIN3-201ENST00000319792 TRAV21A0A0B4J279 112 aa23.17■■□□□ 1.3
NECTIN3-201ENST00000319792 TSPOP30536 169 aa23.17■■□□□ 1.3
NECTIN3-201ENST00000319792 FOXA3P55318 350 aaPredicted RBP23.17■■□□□ 1.3
NECTIN3-201ENST00000319792 NUP35Q8NFH5 326 aa23.17■■□□□ 1.3
NECTIN3-201ENST00000319792 C11orf21Q9P2W6 132 aa23.17■■□□□ 1.3
NECTIN3-201ENST00000319792 XKRY2A2RUG3 117 aa23.16■■□□□ 1.3
NECTIN3-201ENST00000319792 HIGD1CA8MV81 97 aa23.16■■□□□ 1.3
NECTIN3-201ENST00000319792 J3KRW8 73 aa23.15■■□□□ 1.3
NECTIN3-201ENST00000319792 IGKV3-20P01619 116 aa23.15■■□□□ 1.3
NECTIN3-201ENST00000319792 GZMBP10144 247 aa23.15■■□□□ 1.3
NECTIN3-201ENST00000319792 RNASE4P34096 147 aaKnown RBP23.15■■□□□ 1.3
NECTIN3-201ENST00000319792 KIR3DS1Q14943 382 aa23.15■■□□□ 1.3
NECTIN3-201ENST00000319792 ZNF575Q86XF7 245 aa23.15■■□□□ 1.3
NECTIN3-201ENST00000319792 ORM1P02763 201 aa23.14■■□□□ 1.3
NECTIN3-201ENST00000319792 SRD5A3Q9H8P0 318 aa23.14■■□□□ 1.3
NECTIN3-201ENST00000319792 CDKN1BP46527 198 aa23.13■■□□□ 1.29
NECTIN3-201ENST00000319792 Q6ZQT7 251 aa23.13■■□□□ 1.29
NECTIN3-201ENST00000319792 C19orf73Q9NVV2 129 aa23.13■■□□□ 1.29
NECTIN3-201ENST00000319792 IGKV3D-20A0A0C4DH25 116 aa23.13■■□□□ 1.29
NECTIN3-201ENST00000319792 RBMY1BA6NDE4 496 aaKnown RBP23.13■■□□□ 1.29
NECTIN3-201ENST00000319792 RBMY1EA6NEQ0 496 aaKnown RBP23.13■■□□□ 1.29
NECTIN3-201ENST00000319792 RBMY1DP0C7P1 496 aaKnown RBP23.13■■□□□ 1.29
NECTIN3-201ENST00000319792 RPS10P46783 165 aaKnown RBP23.13■■□□□ 1.29
NECTIN3-201ENST00000319792 STAB1Q9NY15 2570 aa23.12■■□□□ 1.29
NECTIN3-201ENST00000319792 C7orf71A4D174 169 aa23.12■■□□□ 1.29
NECTIN3-201ENST00000319792 WIPF1O43516 503 aa23.12■■□□□ 1.29
NECTIN3-201ENST00000319792 CD7P09564 240 aa23.12■■□□□ 1.29
NECTIN3-201ENST00000319792 TMSB15BA0A087X1C1 80 aa23.11■■□□□ 1.29
NECTIN3-201ENST00000319792 M0R2Z0 102 aa23.1■■□□□ 1.29
NECTIN3-201ENST00000319792 SPINK13Q1W4C9 94 aa23.1■■□□□ 1.29
NECTIN3-201ENST00000319792 GFI1BQ5VTD9 330 aa23.1■■□□□ 1.29
NECTIN3-201ENST00000319792 NOTCH3Q9UM47 2321 aa23.09■■□□□ 1.29
NECTIN3-201ENST00000319792 ATP5L2Q7Z4Y8 100 aa23.08■■□□□ 1.29
NECTIN3-201ENST00000319792 PGLYRP4Q96LB8 373 aa23.08■■□□□ 1.29
NECTIN3-201ENST00000319792 ZNF324O75467 553 aaPredicted RBP23.08■■□□□ 1.28
NECTIN3-201ENST00000319792 IGLC6P0CF74 106 aa23.08■■□□□ 1.28
NECTIN3-201ENST00000319792 TRPT1Q86TN4 253 aaKnown RBP23.08■■□□□ 1.28
NECTIN3-201ENST00000319792 SPINK4O60575 86 aa23.07■■□□□ 1.28
NECTIN3-201ENST00000319792 RASL11AQ6T310 242 aa23.07■■□□□ 1.28
NECTIN3-201ENST00000319792 STHQ8IWL8 128 aa23.07■■□□□ 1.28
NECTIN3-201ENST00000319792 TMA7Q9Y2S6 64 aaKnown RBP23.07■■□□□ 1.28
NECTIN3-201ENST00000319792 COL6A5A8TX70 2615 aa23.06■■□□□ 1.28
NECTIN3-201ENST00000319792 COX19Q49B96 90 aa23.06■■□□□ 1.28
NECTIN3-201ENST00000319792 MRPL54Q6P161 138 aaKnown RBP23.06■■□□□ 1.28
NECTIN3-201ENST00000319792 TRAV12-2A0A075B6T6 113 aa23.05■■□□□ 1.28
NECTIN3-201ENST00000319792 A0A1B0GXF2 115 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms