RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 SMIM27A0A1W2PRY6 76 aa16.78■□□□□ 0.28
IRF3-201ENST00000309877 RAB5AP20339 215 aa16.78■□□□□ 0.28
IRF3-201ENST00000309877 TSKUQ8WUA8 353 aa16.78■□□□□ 0.28
IRF3-201ENST00000309877 TMEM158Q8WZ71 300 aa16.78■□□□□ 0.28
IRF3-201ENST00000309877 J3KRW8 73 aa16.77■□□□□ 0.28
IRF3-201ENST00000309877 C12orf54Q6X4T0 127 aa16.77■□□□□ 0.28
IRF3-201ENST00000309877 BTF3L4Q96K17 158 aa16.77■□□□□ 0.28
IRF3-201ENST00000309877 FAM19A4Q96LR4 140 aa16.77■□□□□ 0.28
IRF3-201ENST00000309877 KNCNA6PVL3 124 aa16.76■□□□□ 0.27
IRF3-201ENST00000309877 IGKV3-20P01619 116 aa16.76■□□□□ 0.27
IRF3-201ENST00000309877 GPX1P07203 203 aa16.76■□□□□ 0.27
IRF3-201ENST00000309877 ACTL10Q5JWF8 245 aa16.76■□□□□ 0.27
IRF3-201ENST00000309877 ZFAND2AQ8N6M9 145 aa16.76■□□□□ 0.27
IRF3-201ENST00000309877 PYGO2Q9BRQ0 406 aa16.76■□□□□ 0.27
IRF3-201ENST00000309877 TRAV9-1A0A075B6T8 112 aa16.75■□□□□ 0.27
IRF3-201ENST00000309877 TMEM189A5PLL7 270 aa16.75■□□□□ 0.27
IRF3-201ENST00000309877 RPL19P84098 196 aaKnown RBP16.75■□□□□ 0.27
IRF3-201ENST00000309877 CRISP2P16562 243 aa16.75■□□□□ 0.27
IRF3-201ENST00000309877 LEPP41159 167 aa16.75■□□□□ 0.27
IRF3-201ENST00000309877 INSL3P51460 131 aa16.75■□□□□ 0.27
IRF3-201ENST00000309877 CMC4P56277 68 aaPredicted RBP16.75■□□□□ 0.27
IRF3-201ENST00000309877 C9orf66Q5T8R8 295 aa16.75■□□□□ 0.27
IRF3-201ENST00000309877 ODF3Q96PU9 254 aa16.75■□□□□ 0.27
IRF3-201ENST00000309877 NEU1Q99519 415 aa16.75■□□□□ 0.27
IRF3-201ENST00000309877 ORM1P02763 201 aa16.74■□□□□ 0.27
IRF3-201ENST00000309877 HLA-DRB4P13762 266 aa16.74■□□□□ 0.27
IRF3-201ENST00000309877 SHISA2Q6UWI4 295 aa16.74■□□□□ 0.27
IRF3-201ENST00000309877 NAT8BQ9UHF3 227 aa16.74■□□□□ 0.27
IRF3-201ENST00000309877 HLA-DRB4X5D2U9 266 aa16.74■□□□□ 0.27
IRF3-201ENST00000309877 XKRY2A2RUG3 117 aa16.73■□□□□ 0.27
IRF3-201ENST00000309877 OR11H12B2RN74 326 aa16.73■□□□□ 0.27
IRF3-201ENST00000309877 RNASE4P34096 147 aaKnown RBP16.73■□□□□ 0.27
IRF3-201ENST00000309877 RPS10P46783 165 aaKnown RBP16.73■□□□□ 0.27
IRF3-201ENST00000309877 ODF3L2Q3SX64 289 aa16.73■□□□□ 0.27
IRF3-201ENST00000309877 PRR9Q5T870 116 aa16.73■□□□□ 0.27
IRF3-201ENST00000309877 APRG1Q8IVJ8 170 aa16.73■□□□□ 0.27
IRF3-201ENST00000309877 GFRA4Q9GZZ7 299 aa16.73■□□□□ 0.27
IRF3-201ENST00000309877 TMA7Q9Y2S6 64 aaKnown RBP16.73■□□□□ 0.27
IRF3-201ENST00000309877 TMSB15BA0A087X1C1 80 aa16.72■□□□□ 0.27
IRF3-201ENST00000309877 HIGD1CA8MV81 97 aa16.72■□□□□ 0.27
IRF3-201ENST00000309877 GZMBP10144 247 aa16.72■□□□□ 0.27
IRF3-201ENST00000309877 ZNF124Q15973 351 aa16.72■□□□□ 0.27
IRF3-201ENST00000309877 ATRQ13535 2644 aa16.72■□□□□ 0.27
IRF3-201ENST00000309877 H3BMM0 161 aa16.72■□□□□ 0.27
IRF3-201ENST00000309877 TSPOP30536 169 aa16.72■□□□□ 0.27
IRF3-201ENST00000309877 RPS20P60866 119 aaKnown RBP16.72■□□□□ 0.27
IRF3-201ENST00000309877 SPATA3Q8NHX4 192 aa16.72■□□□□ 0.27
IRF3-201ENST00000309877 MCRIP2Q9BUT9 160 aaKnown RBP16.72■□□□□ 0.27
IRF3-201ENST00000309877 TRAV21A0A0B4J279 112 aa16.71■□□□□ 0.27
IRF3-201ENST00000309877 FAM231BA6NCW3 169 aa16.71■□□□□ 0.27
IRF3-201ENST00000309877 NUP35Q8NFH5 326 aa16.71■□□□□ 0.27
IRF3-201ENST00000309877 KLLNB2CW77 178 aa16.7■□□□□ 0.26
IRF3-201ENST00000309877 SPINK4O60575 86 aa16.7■□□□□ 0.26
IRF3-201ENST00000309877 BEAN1Q3B7T3 259 aa16.7■□□□□ 0.26
IRF3-201ENST00000309877 GTSF1Q8WW33 167 aa16.7■□□□□ 0.26
IRF3-201ENST00000309877 TENM1Q9UKZ4 2725 aa16.7■□□□□ 0.26
IRF3-201ENST00000309877 TYMSP04818 313 aa16.69■□□□□ 0.26
IRF3-201ENST00000309877 KIR3DS1Q14943 382 aa16.69■□□□□ 0.26
IRF3-201ENST00000309877 LINC01559Q495D7 138 aa16.69■□□□□ 0.26
IRF3-201ENST00000309877 CDKN1BP46527 198 aa16.69■□□□□ 0.26
IRF3-201ENST00000309877 Q6AWC8 147 aa16.69■□□□□ 0.26
IRF3-201ENST00000309877 WFDC9Q8NEX5 89 aa16.69■□□□□ 0.26
IRF3-201ENST00000309877 PGLYRP4Q96LB8 373 aa16.69■□□□□ 0.26
IRF3-201ENST00000309877 SRD5A3Q9H8P0 318 aa16.69■□□□□ 0.26
IRF3-201ENST00000309877 M0R2Z0 102 aa16.68■□□□□ 0.26
IRF3-201ENST00000309877 SPINK13Q1W4C9 94 aa16.68■□□□□ 0.26
IRF3-201ENST00000309877 AMTNQ6UX39 209 aa16.68■□□□□ 0.26
IRF3-201ENST00000309877 Q6ZQT7 251 aa16.68■□□□□ 0.26
IRF3-201ENST00000309877 C11orf21Q9P2W6 132 aa16.68■□□□□ 0.26
IRF3-201ENST00000309877 A8MTW9 85 aa16.67■□□□□ 0.26
IRF3-201ENST00000309877 CD7P09564 240 aa16.67■□□□□ 0.26
IRF3-201ENST00000309877 FOXA3P55318 350 aaPredicted RBP16.67■□□□□ 0.26
IRF3-201ENST00000309877 MRPL54Q6P161 138 aaKnown RBP16.67■□□□□ 0.26
IRF3-201ENST00000309877 STHQ8IWL8 128 aa16.67■□□□□ 0.26
IRF3-201ENST00000309877 FAM110AQ9BQ89 295 aa16.67■□□□□ 0.26
IRF3-201ENST00000309877 NAGKQ9UJ70 344 aa16.67■□□□□ 0.26
IRF3-201ENST00000309877 C7orf71A4D174 169 aa16.66■□□□□ 0.26
IRF3-201ENST00000309877 TPPP3Q9BW30 176 aa16.66■□□□□ 0.26
IRF3-201ENST00000309877 IGKV3D-20A0A0C4DH25 116 aa16.65■□□□□ 0.26
IRF3-201ENST00000309877 SORL1Q92673 2214 aa16.65■□□□□ 0.26
IRF3-201ENST00000309877 FBN1P35555 2871 aaKnown RBP16.65■□□□□ 0.26
IRF3-201ENST00000309877 TRAV12-2A0A075B6T6 113 aa16.65■□□□□ 0.26
IRF3-201ENST00000309877 TRAV12-3A0A0B4J271 114 aa16.65■□□□□ 0.26
IRF3-201ENST00000309877 GRIFINA4D1Z8 144 aa16.65■□□□□ 0.26
IRF3-201ENST00000309877 C1orf196B1AJZ1 125 aa16.65■□□□□ 0.26
IRF3-201ENST00000309877 FXYD7P58549 80 aa16.64■□□□□ 0.25
IRF3-201ENST00000309877 GFI1BQ5VTD9 330 aa16.64■□□□□ 0.25
IRF3-201ENST00000309877 RBMY1BA6NDE4 496 aaKnown RBP16.63■□□□□ 0.25
IRF3-201ENST00000309877 RBMY1EA6NEQ0 496 aaKnown RBP16.63■□□□□ 0.25
IRF3-201ENST00000309877 RBMY1DP0C7P1 496 aaKnown RBP16.63■□□□□ 0.25
IRF3-201ENST00000309877 IGLL1P15814 213 aa16.63■□□□□ 0.25
IRF3-201ENST00000309877 ATP5L2Q7Z4Y8 100 aa16.63■□□□□ 0.25
IRF3-201ENST00000309877 FER1L6-AS1Q8NA97 138 aa16.63■□□□□ 0.25
IRF3-201ENST00000309877 BORCS7Q96B45 105 aa16.63■□□□□ 0.25
IRF3-201ENST00000309877 CLUHP3Q96NS8 147 aa16.63■□□□□ 0.25
IRF3-201ENST00000309877 TRGC2P03986 189 aa16.62■□□□□ 0.25
IRF3-201ENST00000309877 MUC21Q5SSG8 566 aa16.62■□□□□ 0.25
IRF3-201ENST00000309877 FRMD6-AS1P0C7T7 363 aa16.62■□□□□ 0.25
IRF3-201ENST00000309877 ANXA2RQ3ZCQ2 193 aa16.62■□□□□ 0.25
IRF3-201ENST00000309877 COX19Q49B96 90 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms