RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 ATP6V0E1O15342 81 aa8.43□□□□□ -1.06
MUC4-201ENST00000308466 LINC00322Q6ZN03 302 aaPredicted RBP8.43□□□□□ -1.06
MUC4-201ENST00000308466 AMN1Q8IY45 258 aa8.43□□□□□ -1.06
MUC4-201ENST00000308466 CCDC168Q8NDH2 2452 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 SMKR1H3BMG3 65 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 SH2D1AO60880 128 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 CRYGCP07315 174 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 MGPP08493 103 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 ERCC8Q13216 396 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 CDSNQ15517 529 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 CCL19Q99731 98 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 PIMREGQ9BSJ6 248 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 USP9XQ93008 2570 aaPredicted RBP8.42□□□□□ -1.06
MUC4-201ENST00000308466 SMIM17P0DL12 118 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 RNF182Q8N6D2 247 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 GLMPQ8WWB7 406 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 C20orf78Q9BR46 151 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 KLK15Q9H2R5 256 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 HTN1P15515 57 aa8.42□□□□□ -1.06
MUC4-201ENST00000308466 ZFYVE26Q68DK2 2539 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 H3BRN7 92 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 LTAP01374 205 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 CACNG7P62955 275 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 Q6AWC8 147 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 Q8N976 141 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 MAP1LC3AQ9H492 121 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 OOSP1A8MZH6 123 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 NPFFO15130 113 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 SNCGO76070 127 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 IGKV3-20P01619 116 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 EVI2AP22794 236 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 LYPD1Q8N2G4 141 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 OR11H6Q8NGC7 330 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 GTSF1Q8WW33 167 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 ZNF414Q96IQ9 312 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 ZNF492Q9P255 531 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 M0R381 172 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 SRD5A1P18405 259 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 OR10J6PQ8NGY7 276 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 HIST1H4GQ99525 98 aa8.41□□□□□ -1.06
MUC4-201ENST00000308466 ZFP36P26651 326 aaKnown RBP8.4□□□□□ -1.06
MUC4-201ENST00000308466 ODF1Q14990 250 aa8.4□□□□□ -1.06
MUC4-201ENST00000308466 TMEM75Q8N9X5 138 aa8.4□□□□□ -1.06
MUC4-201ENST00000308466 TMEM14CQ9P0S9 112 aa8.4□□□□□ -1.06
MUC4-201ENST00000308466 A6NJY4 79 aa8.4□□□□□ -1.06
MUC4-201ENST00000308466 CHCHD1Q96BP2 118 aaKnown RBP8.4□□□□□ -1.06
MUC4-201ENST00000308466 PSMB2P49721 201 aa8.4□□□□□ -1.07
MUC4-201ENST00000308466 EMP1P54849 157 aa8.4□□□□□ -1.07
MUC4-201ENST00000308466 SPAG8Q99932 426 aaPredicted RBP8.4□□□□□ -1.07
MUC4-201ENST00000308466 IFI27P40305 119 aaPredicted RBP8.39□□□□□ -1.07
MUC4-201ENST00000308466 GAGE2BQ13066 116 aa8.39□□□□□ -1.07
MUC4-201ENST00000308466 GAGE2EQ4V326 116 aa8.39□□□□□ -1.07
MUC4-201ENST00000308466 GDF5OSQ5U4N7 250 aa8.39□□□□□ -1.07
MUC4-201ENST00000308466 VGLL1Q99990 258 aa8.39□□□□□ -1.07
MUC4-201ENST00000308466 GAGE2DQ9UEU5 116 aa8.39□□□□□ -1.07
MUC4-201ENST00000308466 TRAV41A0A0B4J266 112 aa8.39□□□□□ -1.07
MUC4-201ENST00000308466 UBE2E1P51965 193 aa8.39□□□□□ -1.07
MUC4-201ENST00000308466 SIGLEC15Q6ZMC9 328 aa8.39□□□□□ -1.07
MUC4-201ENST00000308466 C1QTNF4Q9BXJ3 329 aa8.39□□□□□ -1.07
MUC4-201ENST00000308466 CT83Q5H943 113 aa8.39□□□□□ -1.07
MUC4-201ENST00000308466 C8orf86Q6ZUL3 223 aa8.39□□□□□ -1.07
MUC4-201ENST00000308466 ADGRG4Q8IZF6 3080 aa8.39□□□□□ -1.07
MUC4-201ENST00000308466 DSCAML1Q8TD84 2053 aa8.39□□□□□ -1.07
MUC4-201ENST00000308466 PRSS29PA6NIE9 313 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 H3BUX3 64 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 MT-ATP8P03928 68 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 PAX8Q06710 450 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 DYNAPQ8N1N2 210 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 MYOZ3Q8TDC0 251 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 KLF12Q9Y4X4 402 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 PHLDA3Q9Y5J5 127 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 RAI1Q7Z5J4 1906 aaPredicted RBP8.38□□□□□ -1.07
MUC4-201ENST00000308466 H7C2G1 150 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 GFRA4Q9GZZ7 299 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 MS4A6AQ9H2W1 248 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 SETD2Q9BYW2 2564 aaPredicted RBP8.38□□□□□ -1.07
MUC4-201ENST00000308466 WNK1Q9H4A3 2382 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 SONP18583 2426 aaKnown RBP8.38□□□□□ -1.07
MUC4-201ENST00000308466 TRAV8-2A0A0B4J237 113 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 IGHV1-24A0A0C4DH33 117 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 TNFRSF13BO14836 293 aaPredicted RBP8.38□□□□□ -1.07
MUC4-201ENST00000308466 PDE6HQ13956 83 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 FANCD2OSQ96PS1 177 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 PRR25Q96S07 402 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 NAV2Q8IVL1 2488 aa8.38□□□□□ -1.07
MUC4-201ENST00000308466 ZFHX4Q86UP3 3567 aa8.37□□□□□ -1.07
MUC4-201ENST00000308466 IGHV7-81A0A0B4J1V7 117 aa8.37□□□□□ -1.07
MUC4-201ENST00000308466 HOXB4P17483 251 aaPredicted RBP8.37□□□□□ -1.07
MUC4-201ENST00000308466 INSL3P51460 131 aa8.37□□□□□ -1.07
MUC4-201ENST00000308466 MRPL23Q16540 153 aaKnown RBP8.37□□□□□ -1.07
MUC4-201ENST00000308466 IGLV11-55A0A075B6I3 123 aa8.37□□□□□ -1.07
MUC4-201ENST00000308466 CRYGBP07316 175 aa8.37□□□□□ -1.07
MUC4-201ENST00000308466 COX8AP10176 69 aa8.37□□□□□ -1.07
MUC4-201ENST00000308466 FBXL19-AS1Q494R0 122 aa8.37□□□□□ -1.07
MUC4-201ENST00000308466 SLC50A1Q9BRV3 221 aa8.37□□□□□ -1.07
MUC4-201ENST00000308466 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.37□□□□□ -1.07
MUC4-201ENST00000308466 WIPF2Q8TF74 440 aaPredicted RBP8.37□□□□□ -1.07
MUC4-201ENST00000308466 CTSGP08311 255 aa8.36□□□□□ -1.07
MUC4-201ENST00000308466 DEFB104AQ8WTQ1 72 aa8.36□□□□□ -1.07
MUC4-201ENST00000308466 TTTY13Q9BZ97 58 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms