RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 GNB1LQ9BYB4 327 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 MT-ND6P03923 174 aa11.81□□□□□ -0.52
HERPUD1-201ENST00000300302 TRGC1P0CF51 173 aa11.81□□□□□ -0.52
HERPUD1-201ENST00000300302 ZNF80P51504 273 aaPredicted RBP11.81□□□□□ -0.52
HERPUD1-201ENST00000300302 MRPL54Q6P161 138 aaKnown RBP11.81□□□□□ -0.52
HERPUD1-201ENST00000300302 ATP5L2Q7Z4Y8 100 aa11.81□□□□□ -0.52
HERPUD1-201ENST00000300302 GTSF1Q8WW33 167 aa11.81□□□□□ -0.52
HERPUD1-201ENST00000300302 ZNF688P0C7X2 276 aa11.8□□□□□ -0.52
HERPUD1-201ENST00000300302 RPS20P60866 119 aaKnown RBP11.8□□□□□ -0.52
HERPUD1-201ENST00000300302 PSMG4Q5JS54 123 aa11.8□□□□□ -0.52
HERPUD1-201ENST00000300302 Q6AWC8 147 aa11.8□□□□□ -0.52
HERPUD1-201ENST00000300302 NSD1Q96L73 2696 aaPredicted RBP11.8□□□□□ -0.52
HERPUD1-201ENST00000300302 FN1P02751 2386 aaKnown RBP11.8□□□□□ -0.52
HERPUD1-201ENST00000300302 TRAV2A0A0B4J234 112 aa11.8□□□□□ -0.52
HERPUD1-201ENST00000300302 TRBV7-9A0A0J9YWB2 115 aa11.8□□□□□ -0.52
HERPUD1-201ENST00000300302 SNURFLB1AK76 121 aa11.8□□□□□ -0.52
HERPUD1-201ENST00000300302 FOXA3P55318 350 aaPredicted RBP11.8□□□□□ -0.52
HERPUD1-201ENST00000300302 PGLYRP4Q96LB8 373 aa11.8□□□□□ -0.52
HERPUD1-201ENST00000300302 F6UB75 175 aa11.79□□□□□ -0.52
HERPUD1-201ENST00000300302 GZMBP10144 247 aa11.79□□□□□ -0.52
HERPUD1-201ENST00000300302 RAB4BP61018 213 aa11.79□□□□□ -0.52
HERPUD1-201ENST00000300302 ORM1P02763 201 aa11.78□□□□□ -0.52
HERPUD1-201ENST00000300302 MRPL18Q9H0U6 180 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-201ENST00000300302 HLA-DQA1P01909 254 aa11.78□□□□□ -0.52
HERPUD1-201ENST00000300302 DEFB1P60022 68 aa11.78□□□□□ -0.52
HERPUD1-201ENST00000300302 DEFB114Q30KQ6 69 aa11.78□□□□□ -0.52
HERPUD1-201ENST00000300302 EBLN2Q6P2I7 272 aa11.78□□□□□ -0.52
HERPUD1-201ENST00000300302 NDUFA11Q86Y39 141 aa11.78□□□□□ -0.52
HERPUD1-201ENST00000300302 SIGLEC8Q9NYZ4 499 aa11.78□□□□□ -0.52
HERPUD1-201ENST00000300302 FRMD6-AS1P0C7T7 363 aa11.77□□□□□ -0.53
HERPUD1-201ENST00000300302 NDUFA6P56556 154 aa11.77□□□□□ -0.53
HERPUD1-201ENST00000300302 HBBP68871 147 aa11.77□□□□□ -0.53
HERPUD1-201ENST00000300302 NSUN5P1Q3KNT7 163 aa11.77□□□□□ -0.53
HERPUD1-201ENST00000300302 TMEM136Q6ZRR5 245 aa11.77□□□□□ -0.53
HERPUD1-201ENST00000300302 TMEM61Q8N0U2 210 aa11.77□□□□□ -0.53
HERPUD1-201ENST00000300302 BORCS7Q96B45 105 aa11.77□□□□□ -0.53
HERPUD1-201ENST00000300302 TMSB15BA0A087X1C1 80 aa11.76□□□□□ -0.53
HERPUD1-201ENST00000300302 AKR1D1P51857 326 aa11.76□□□□□ -0.53
HERPUD1-201ENST00000300302 LINC01559Q495D7 138 aa11.76□□□□□ -0.53
HERPUD1-201ENST00000300302 FAM19A4Q96LR4 140 aa11.76□□□□□ -0.53
HERPUD1-201ENST00000300302 F8P00451 2351 aa11.76□□□□□ -0.53
HERPUD1-201ENST00000300302 TRAV25A0A0B4J276 109 aa11.76□□□□□ -0.53
HERPUD1-201ENST00000300302 A0A1B0GXF2 115 aa11.76□□□□□ -0.53
HERPUD1-201ENST00000300302 ADARB2-AS1A8MUL3 147 aa11.76□□□□□ -0.53
HERPUD1-201ENST00000300302 GPX1P07203 203 aa11.76□□□□□ -0.53
HERPUD1-201ENST00000300302 CRISP2P16562 243 aa11.76□□□□□ -0.53
HERPUD1-201ENST00000300302 HOXA5P20719 270 aa11.76□□□□□ -0.53
HERPUD1-201ENST00000300302 ZFAND2AQ8N6M9 145 aa11.76□□□□□ -0.53
HERPUD1-201ENST00000300302 A0A0J9YX75 114 aa11.75□□□□□ -0.53
HERPUD1-201ENST00000300302 A0A1B0GUT8 65 aa11.75□□□□□ -0.53
HERPUD1-201ENST00000300302 DUSP14O95147 198 aaKnown RBP11.75□□□□□ -0.53
HERPUD1-201ENST00000300302 CAMPP49913 170 aa11.75□□□□□ -0.53
HERPUD1-201ENST00000300302 CD300EQ496F6 205 aaPredicted RBP11.75□□□□□ -0.53
HERPUD1-201ENST00000300302 SPAG8Q99932 426 aaPredicted RBP11.75□□□□□ -0.53
HERPUD1-201ENST00000300302 TRAV21A0A0B4J279 112 aa11.74□□□□□ -0.53
HERPUD1-201ENST00000300302 A0A1B0GW15 77 aa11.74□□□□□ -0.53
HERPUD1-201ENST00000300302 OR4C46A6NHA9 309 aa11.74□□□□□ -0.53
HERPUD1-201ENST00000300302 S100A8P05109 93 aa11.74□□□□□ -0.53
HERPUD1-201ENST00000300302 RIGQ13278 110 aa11.74□□□□□ -0.53
HERPUD1-201ENST00000300302 FOXI2Q6ZQN5 318 aa11.74□□□□□ -0.53
HERPUD1-201ENST00000300302 LINC00518Q8N0U6 118 aa11.74□□□□□ -0.53
HERPUD1-201ENST00000300302 ODF3Q96PU9 254 aa11.74□□□□□ -0.53
HERPUD1-201ENST00000300302 TPPP3Q9BW30 176 aa11.74□□□□□ -0.53
HERPUD1-201ENST00000300302 APCSP02743 223 aa11.74□□□□□ -0.53
HERPUD1-201ENST00000300302 CD33P20138 364 aa11.74□□□□□ -0.53
HERPUD1-201ENST00000300302 APRG1Q8IVJ8 170 aa11.74□□□□□ -0.53
HERPUD1-201ENST00000300302 J3KRW8 73 aa11.73□□□□□ -0.53
HERPUD1-201ENST00000300302 LEPP41159 167 aa11.73□□□□□ -0.53
HERPUD1-201ENST00000300302 KRTAP10-3P60369 221 aa11.73□□□□□ -0.53
HERPUD1-201ENST00000300302 PRR9Q5T870 116 aa11.73□□□□□ -0.53
HERPUD1-201ENST00000300302 GDF5OSQ5U4N7 250 aa11.73□□□□□ -0.53
HERPUD1-201ENST00000300302 FER1L6-AS1Q8NA97 138 aa11.73□□□□□ -0.53
HERPUD1-201ENST00000300302 IFITM10A6NMD0 228 aa11.72□□□□□ -0.53
HERPUD1-201ENST00000300302 RNASE4P34096 147 aaKnown RBP11.72□□□□□ -0.53
HERPUD1-201ENST00000300302 LYZL1Q6UWQ5 148 aa11.72□□□□□ -0.53
HERPUD1-201ENST00000300302 IGKV3D-20A0A0C4DH25 116 aa11.72□□□□□ -0.53
HERPUD1-201ENST00000300302 ARMS2P0C7Q2 107 aa11.72□□□□□ -0.53
HERPUD1-201ENST00000300302 IGLC6P0CF74 106 aa11.72□□□□□ -0.53
HERPUD1-201ENST00000300302 CTRLP40313 264 aa11.72□□□□□ -0.53
HERPUD1-201ENST00000300302 DEFB131AP59861 70 aa11.72□□□□□ -0.53
HERPUD1-201ENST00000300302 KLLNB2CW77 178 aa11.71□□□□□ -0.53
HERPUD1-201ENST00000300302 F2Z2F3 143 aa11.71□□□□□ -0.53
HERPUD1-201ENST00000300302 SAP30O75446 220 aa11.71□□□□□ -0.53
HERPUD1-201ENST00000300302 TSPOP30536 169 aa11.71□□□□□ -0.53
HERPUD1-201ENST00000300302 GFI1BQ5VTD9 330 aa11.71□□□□□ -0.53
HERPUD1-201ENST00000300302 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.71□□□□□ -0.53
HERPUD1-201ENST00000300302 C11orf21Q9P2W6 132 aa11.71□□□□□ -0.53
HERPUD1-201ENST00000300302 GRIFINA4D1Z8 144 aa11.7□□□□□ -0.54
HERPUD1-201ENST00000300302 PF4P02776 101 aa11.7□□□□□ -0.54
HERPUD1-201ENST00000300302 COA6Q5JTJ3 125 aaKnown RBP11.7□□□□□ -0.54
HERPUD1-201ENST00000300302 HIST3H2BBQ8N257 126 aa11.7□□□□□ -0.54
HERPUD1-201ENST00000300302 SLAQ13239 276 aa11.7□□□□□ -0.54
HERPUD1-201ENST00000300302 ZNF575Q86XF7 245 aa11.7□□□□□ -0.54
HERPUD1-201ENST00000300302 SSBP4Q9BWG4 385 aaPredicted RBP11.7□□□□□ -0.54
HERPUD1-201ENST00000300302 NAGKQ9UJ70 344 aa11.7□□□□□ -0.54
HERPUD1-201ENST00000300302 ZNF256Q9Y2P7 627 aaPredicted RBP11.7□□□□□ -0.54
HERPUD1-201ENST00000300302 SETD2Q9BYW2 2564 aaPredicted RBP11.69□□□□□ -0.54
HERPUD1-201ENST00000300302 IGKV3-20P01619 116 aa11.69□□□□□ -0.54
HERPUD1-201ENST00000300302 MAP6D1Q9H9H5 199 aa11.69□□□□□ -0.54
HERPUD1-201ENST00000300302 HLA-DRB4P13762 266 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms