RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 SHANK2-AS3Q9BTD1 123 aa9.26□□□□□ -0.93
SNIP1-201ENST00000296215 DPH3P1Q9H4G8 78 aa9.26□□□□□ -0.93
SNIP1-201ENST00000296215 TRBV7-7A0A0K0K1E9 115 aa9.26□□□□□ -0.93
SNIP1-201ENST00000296215 GATA1P15976 413 aaPredicted RBP9.26□□□□□ -0.93
SNIP1-201ENST00000296215 STHQ8IWL8 128 aa9.26□□□□□ -0.93
SNIP1-201ENST00000296215 ZNF837Q96EG3 531 aaPredicted RBP9.26□□□□□ -0.93
SNIP1-201ENST00000296215 ADARB2-AS1A8MUL3 147 aa9.25□□□□□ -0.93
SNIP1-201ENST00000296215 ATP5EP56381 51 aaPredicted RBP9.25□□□□□ -0.93
SNIP1-201ENST00000296215 FAM201AQ5SY85 155 aa9.25□□□□□ -0.93
SNIP1-201ENST00000296215 LYPD1Q8N2G4 141 aa9.25□□□□□ -0.93
SNIP1-201ENST00000296215 C8orf49Q96NF6 230 aa9.25□□□□□ -0.93
SNIP1-201ENST00000296215 IGKV3-7A0A075B6H7 116 aa9.25□□□□□ -0.93
SNIP1-201ENST00000296215 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.25□□□□□ -0.93
SNIP1-201ENST00000296215 HTN1P15515 57 aa9.25□□□□□ -0.93
SNIP1-201ENST00000296215 IGHV3-33P01772 117 aa9.25□□□□□ -0.93
SNIP1-201ENST00000296215 SMCPP49901 116 aaPredicted RBP9.25□□□□□ -0.93
SNIP1-201ENST00000296215 IGLV3-21P80748 117 aaPredicted RBP9.25□□□□□ -0.93
SNIP1-201ENST00000296215 GFRALQ6UXV0 394 aa9.25□□□□□ -0.93
SNIP1-201ENST00000296215 LINC00336Q6ZUF6 198 aa9.25□□□□□ -0.93
SNIP1-201ENST00000296215 C14orf178Q8N769 122 aaPredicted RBP9.25□□□□□ -0.93
SNIP1-201ENST00000296215 ZNF831Q5JPB2 1677 aa9.25□□□□□ -0.93
SNIP1-201ENST00000296215 DOCK4Q8N1I0 1966 aa9.25□□□□□ -0.93
SNIP1-201ENST00000296215 IGHG3P01860 377 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 UBE2E1P51965 193 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 PRIMA1Q86XR5 153 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 PHLDA1Q8WV24 401 aaPredicted RBP9.24□□□□□ -0.93
SNIP1-201ENST00000296215 CEP290O15078 2479 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 IGKV3D-15A0A087WSY6 115 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 IGKV3-15P01624 115 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 UBE2D3P61077 147 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 UBE2D2P62837 147 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 SOSTDC1Q6X4U4 206 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 LY6G5BQ8NDX9 201 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 TOMM7Q9P0U1 55 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 TRBV7-1A0A0A6YYK4 115 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 ODF3Q96PU9 254 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 SPTBN1Q01082 2364 aaKnown RBP9.24□□□□□ -0.93
SNIP1-201ENST00000296215 CEP250Q9BV73 2442 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 PRR19A6NJB7 356 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 TRBV12-3P01733 135 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 OXLD1Q5BKU9 147 aa9.24□□□□□ -0.93
SNIP1-201ENST00000296215 SAA2P0DJI9 122 aaPredicted RBP9.23□□□□□ -0.93
SNIP1-201ENST00000296215 DAZ2Q13117 558 aaKnown RBP9.23□□□□□ -0.93
SNIP1-201ENST00000296215 DAZ4Q86SG3 579 aaKnown RBP9.23□□□□□ -0.93
SNIP1-201ENST00000296215 DAZ1Q9NQZ3 744 aaKnown RBP9.23□□□□□ -0.93
SNIP1-201ENST00000296215 DAZ3Q9NR90 486 aaKnown RBP9.23□□□□□ -0.93
SNIP1-201ENST00000296215 AHCTF1Q8WYP5 2266 aa9.23□□□□□ -0.93
SNIP1-201ENST00000296215 ECSCRQ19T08 205 aa9.23□□□□□ -0.93
SNIP1-201ENST00000296215 ZNF295-AS1Q8N0V1 137 aa9.23□□□□□ -0.93
SNIP1-201ENST00000296215 GATA4P43694 442 aa9.22□□□□□ -0.93
SNIP1-201ENST00000296215 IGHV3-35A0A0C4DH35 117 aa9.22□□□□□ -0.93
SNIP1-201ENST00000296215 CRIP2P52943 208 aaPredicted RBP9.22□□□□□ -0.93
SNIP1-201ENST00000296215 TRIAP1O43715 76 aa9.22□□□□□ -0.93
SNIP1-201ENST00000296215 PRR25Q96S07 402 aa9.22□□□□□ -0.93
SNIP1-201ENST00000296215 PLA2G2FQ9BZM2 168 aa9.22□□□□□ -0.93
SNIP1-201ENST00000296215 NDUFC1O43677 76 aa9.22□□□□□ -0.93
SNIP1-201ENST00000296215 CEMP1Q6PRD7 247 aaPredicted RBP9.22□□□□□ -0.93
SNIP1-201ENST00000296215 CRIPAKQ8N1N5 446 aa9.22□□□□□ -0.93
SNIP1-201ENST00000296215 IGKV3D-11A0A0A0MRZ8 115 aa9.21□□□□□ -0.93
SNIP1-201ENST00000296215 LINC01619G3V211 115 aa9.21□□□□□ -0.93
SNIP1-201ENST00000296215 SPRY2O43597 315 aa9.21□□□□□ -0.93
SNIP1-201ENST00000296215 PRB2P02812 416 aaPredicted RBP9.21□□□□□ -0.93
SNIP1-201ENST00000296215 IGKV3-11P04433 115 aa9.21□□□□□ -0.93
SNIP1-201ENST00000296215 LIFP15018 202 aa9.21□□□□□ -0.93
SNIP1-201ENST00000296215 TNFRSF4P43489 277 aa9.21□□□□□ -0.93
SNIP1-201ENST00000296215 SNURFQ9Y675 71 aa9.21□□□□□ -0.93
SNIP1-201ENST00000296215 ADAMTS7Q9UKP4 1686 aa9.21□□□□□ -0.94
SNIP1-201ENST00000296215 RALGAPA2Q2PPJ7 1873 aa9.21□□□□□ -0.94
SNIP1-201ENST00000296215 TRBV30A0A0K0K1B3 111 aa9.21□□□□□ -0.94
SNIP1-201ENST00000296215 PAX4O43316 350 aa9.21□□□□□ -0.94
SNIP1-201ENST00000296215 PMS2CLQ68D20 193 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 IGHV1OR15-1A0A075B7D0 117 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 LOXP28300 417 aaPredicted RBP9.2□□□□□ -0.94
SNIP1-201ENST00000296215 WNK2Q9Y3S1 2297 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 F5P12259 2224 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 A0A0J9YY99 117 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 C19orf71A6NCJ1 209 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 K7EM74 188 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 COX7A1P24310 79 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 LINC00158P58513 81 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 RSPO1Q2MKA7 263 aaPredicted RBP9.2□□□□□ -0.94
SNIP1-201ENST00000296215 PVRIGQ6DKI7 326 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 TIMM17AQ99595 171 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 PRSS22Q9GZN4 317 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 S4R3C0 116 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 HOXD3P31249 432 aaPredicted RBP9.2□□□□□ -0.94
SNIP1-201ENST00000296215 C10orf55Q5SWW7 151 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 ZNRF1Q8ND25 227 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 PCDH15Q96QU1 1955 aa9.2□□□□□ -0.94
SNIP1-201ENST00000296215 IGHV3OR16-13A0A075B7E8 117 aa9.19□□□□□ -0.94
SNIP1-201ENST00000296215 IGHV3-74A0A0B4J1X5 117 aa9.19□□□□□ -0.94
SNIP1-201ENST00000296215 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.19□□□□□ -0.94
SNIP1-201ENST00000296215 KHDC1LQ5JSQ8 128 aa9.19□□□□□ -0.94
SNIP1-201ENST00000296215 VWCEQ96DN2 955 aa9.19□□□□□ -0.94
SNIP1-201ENST00000296215 TET1Q8NFU7 2136 aa9.19□□□□□ -0.94
SNIP1-201ENST00000296215 FUSP35637 526 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNIP1-201ENST00000296215 C14orf132Q9NPU4 83 aa9.19□□□□□ -0.94
SNIP1-201ENST00000296215 UBR3Q6ZT12 1888 aa9.19□□□□□ -0.94
SNIP1-201ENST00000296215 NBR2O15453 112 aa9.19□□□□□ -0.94
SNIP1-201ENST00000296215 PSPNO60542 156 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms