RNA–Protein interactions for RNA: ENST00000285814.8

NIFK-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIFK, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-201ENST00000285814 CMC4P56277 68 aaPredicted RBP13.59□□□□□ -0.23
NIFK-201ENST00000285814 YPEL4Q96NS1 127 aa13.59□□□□□ -0.23
NIFK-201ENST00000285814 STAB1Q9NY15 2570 aa13.59□□□□□ -0.23
NIFK-201ENST00000285814 OR11H12B2RN74 326 aa13.59□□□□□ -0.23
NIFK-201ENST00000285814 H3BMM0 161 aa13.59□□□□□ -0.23
NIFK-201ENST00000285814 WIPF1O43516 503 aa13.59□□□□□ -0.23
NIFK-201ENST00000285814 SH2D1AO60880 128 aa13.59□□□□□ -0.23
NIFK-201ENST00000285814 ZNF124Q15973 351 aa13.59□□□□□ -0.23
NIFK-201ENST00000285814 ACTL10Q5JWF8 245 aa13.59□□□□□ -0.23
NIFK-201ENST00000285814 IMMP2LQ96T52 175 aa13.59□□□□□ -0.23
NIFK-201ENST00000285814 RPP21Q9H633 154 aaKnown RBP13.59□□□□□ -0.23
NIFK-201ENST00000285814 CT83Q5H943 113 aa13.58□□□□□ -0.24
NIFK-201ENST00000285814 PRR9Q5T870 116 aa13.58□□□□□ -0.24
NIFK-201ENST00000285814 OR4B1Q8NGF8 309 aa13.58□□□□□ -0.24
NIFK-201ENST00000285814 TRRAPQ9Y4A5 3859 aa13.58□□□□□ -0.24
NIFK-201ENST00000285814 KLLNB2CW77 178 aa13.57□□□□□ -0.24
NIFK-201ENST00000285814 PFN1P07737 140 aaKnown RBP13.57□□□□□ -0.24
NIFK-201ENST00000285814 AMTNQ6UX39 209 aa13.57□□□□□ -0.24
NIFK-201ENST00000285814 IL36BQ9NZH7 164 aa13.57□□□□□ -0.24
NIFK-201ENST00000285814 URGCP-MRPS24S4R325 110 aa13.57□□□□□ -0.24
NIFK-201ENST00000285814 COL6A5A8TX70 2615 aa13.57□□□□□ -0.24
NIFK-201ENST00000285814 FABP5P3A8MUU1 101 aa13.56□□□□□ -0.24
NIFK-201ENST00000285814 CD7P09564 240 aa13.56□□□□□ -0.24
NIFK-201ENST00000285814 IGLL1P15814 213 aa13.56□□□□□ -0.24
NIFK-201ENST00000285814 ELOBQ15370 118 aa13.56□□□□□ -0.24
NIFK-201ENST00000285814 C19orf73Q9NVV2 129 aa13.56□□□□□ -0.24
NIFK-201ENST00000285814 AGRNO00468 2067 aa13.56□□□□□ -0.24
NIFK-201ENST00000285814 CA1P00915 261 aaPredicted RBP13.56□□□□□ -0.24
NIFK-201ENST00000285814 IGKV3-20P01619 116 aa13.56□□□□□ -0.24
NIFK-201ENST00000285814 LEPP41159 167 aa13.56□□□□□ -0.24
NIFK-201ENST00000285814 CLUHP3Q96NS8 147 aa13.56□□□□□ -0.24
NIFK-201ENST00000285814 GPX1P07203 203 aa13.55□□□□□ -0.24
NIFK-201ENST00000285814 S100PP25815 95 aa13.55□□□□□ -0.24
NIFK-201ENST00000285814 OR2D3Q8NGH3 330 aa13.55□□□□□ -0.24
NIFK-201ENST00000285814 SMIM27A0A1W2PRY6 76 aa13.54□□□□□ -0.24
NIFK-201ENST00000285814 COLCA2A8K830 154 aa13.54□□□□□ -0.24
NIFK-201ENST00000285814 KIR3DS1Q14943 382 aa13.54□□□□□ -0.24
NIFK-201ENST00000285814 Q6AWC8 147 aa13.54□□□□□ -0.24
NIFK-201ENST00000285814 KCNIP4Q6PIL6 250 aa13.54□□□□□ -0.24
NIFK-201ENST00000285814 LURAP1LQ8IV03 231 aa13.54□□□□□ -0.24
NIFK-201ENST00000285814 TSKUQ8WUA8 353 aa13.54□□□□□ -0.24
NIFK-201ENST00000285814 RBMY1BA6NDE4 496 aaKnown RBP13.53□□□□□ -0.24
NIFK-201ENST00000285814 RBMY1EA6NEQ0 496 aaKnown RBP13.53□□□□□ -0.24
NIFK-201ENST00000285814 A8MWL6 223 aa13.53□□□□□ -0.24
NIFK-201ENST00000285814 J3KRW8 73 aa13.53□□□□□ -0.24
NIFK-201ENST00000285814 RBMY1DP0C7P1 496 aaKnown RBP13.53□□□□□ -0.24
NIFK-201ENST00000285814 TSPOP30536 169 aa13.53□□□□□ -0.24
NIFK-201ENST00000285814 CDKN1BP46527 198 aa13.53□□□□□ -0.24
NIFK-201ENST00000285814 RPL19P84098 196 aaKnown RBP13.53□□□□□ -0.24
NIFK-201ENST00000285814 TRAV21A0A0B4J279 112 aa13.53□□□□□ -0.24
NIFK-201ENST00000285814 FAM3BP58499 235 aaPredicted RBP13.53□□□□□ -0.24
NIFK-201ENST00000285814 LINC01559Q495D7 138 aa13.53□□□□□ -0.24
NIFK-201ENST00000285814 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.53□□□□□ -0.24
NIFK-201ENST00000285814 TRBV24-1A0A075B6N3 115 aa13.52□□□□□ -0.25
NIFK-201ENST00000285814 M0R2Z0 102 aa13.52□□□□□ -0.25
NIFK-201ENST00000285814 RNASE4P34096 147 aaKnown RBP13.52□□□□□ -0.25
NIFK-201ENST00000285814 SPINK13Q1W4C9 94 aa13.52□□□□□ -0.25
NIFK-201ENST00000285814 Q6ZQT7 251 aa13.52□□□□□ -0.25
NIFK-201ENST00000285814 TRPT1Q86TN4 253 aaKnown RBP13.52□□□□□ -0.25
NIFK-201ENST00000285814 MDFIQ99750 246 aa13.52□□□□□ -0.25
NIFK-201ENST00000285814 PYGO2Q9BRQ0 406 aa13.52□□□□□ -0.25
NIFK-201ENST00000285814 GFRA4Q9GZZ7 299 aa13.52□□□□□ -0.25
NIFK-201ENST00000285814 C11orf21Q9P2W6 132 aa13.52□□□□□ -0.25
NIFK-201ENST00000285814 ANK2Q01484 3957 aa13.51□□□□□ -0.25
NIFK-201ENST00000285814 TGIF2-C20orf24A0A0A6YYL0 155 aa13.51□□□□□ -0.25
NIFK-201ENST00000285814 A0A1W2PPQ1 181 aa13.51□□□□□ -0.25
NIFK-201ENST00000285814 TMEM189A5PLL7 270 aa13.51□□□□□ -0.25
NIFK-201ENST00000285814 FAM231BA6NCW3 169 aa13.51□□□□□ -0.25
NIFK-201ENST00000285814 CXCL1P09341 107 aa13.51□□□□□ -0.25
NIFK-201ENST00000285814 STHQ8IWL8 128 aa13.51□□□□□ -0.25
NIFK-201ENST00000285814 NEU1Q99519 415 aa13.51□□□□□ -0.25
NIFK-201ENST00000285814 WFDC10AQ9H1F0 79 aa13.51□□□□□ -0.25
NIFK-201ENST00000285814 TRAV9-1A0A075B6T8 112 aa13.5□□□□□ -0.25
NIFK-201ENST00000285814 C7orf71A4D174 169 aa13.5□□□□□ -0.25
NIFK-201ENST00000285814 TCL1AP56279 114 aa13.5□□□□□ -0.25
NIFK-201ENST00000285814 PRR31Q5SQ13 230 aa13.5□□□□□ -0.25
NIFK-201ENST00000285814 GFI1BQ5VTD9 330 aa13.5□□□□□ -0.25
NIFK-201ENST00000285814 GTSCR1Q86UQ5 136 aa13.5□□□□□ -0.25
NIFK-201ENST00000285814 GTSF1Q8WW33 167 aa13.5□□□□□ -0.25
NIFK-201ENST00000285814 IGKV3D-20A0A0C4DH25 116 aa13.5□□□□□ -0.25
NIFK-201ENST00000285814 ORM1P02763 201 aa13.5□□□□□ -0.25
NIFK-201ENST00000285814 ZNF575Q86XF7 245 aa13.5□□□□□ -0.25
NIFK-201ENST00000285814 TRAV12-2A0A075B6T6 113 aa13.49□□□□□ -0.25
NIFK-201ENST00000285814 XKRY2A2RUG3 117 aa13.49□□□□□ -0.25
NIFK-201ENST00000285814 HIGD1CA8MV81 97 aa13.49□□□□□ -0.25
NIFK-201ENST00000285814 GZMBP10144 247 aa13.49□□□□□ -0.25
NIFK-201ENST00000285814 RPS20P60866 119 aaKnown RBP13.49□□□□□ -0.25
NIFK-201ENST00000285814 NAT8BQ9UHF3 227 aa13.49□□□□□ -0.25
NIFK-201ENST00000285814 NOTCH3Q9UM47 2321 aa13.49□□□□□ -0.25
NIFK-201ENST00000285814 ZNF324O75467 553 aaPredicted RBP13.48□□□□□ -0.25
NIFK-201ENST00000285814 FOXA3P55318 350 aaPredicted RBP13.48□□□□□ -0.25
NIFK-201ENST00000285814 NUP35Q8NFH5 326 aa13.48□□□□□ -0.25
NIFK-201ENST00000285814 BTF3L4Q96K17 158 aa13.48□□□□□ -0.25
NIFK-201ENST00000285814 TMSB15BA0A087X1C1 80 aa13.47□□□□□ -0.25
NIFK-201ENST00000285814 TRAV12-3A0A0B4J271 114 aa13.47□□□□□ -0.25
NIFK-201ENST00000285814 CRXO43186 299 aaPredicted RBP13.47□□□□□ -0.25
NIFK-201ENST00000285814 FXYD7P58549 80 aa13.47□□□□□ -0.25
NIFK-201ENST00000285814 FAM210BQ96KR6 192 aa13.47□□□□□ -0.25
NIFK-201ENST00000285814 RAB5AP20339 215 aa13.46□□□□□ -0.25
NIFK-201ENST00000285814 OXLD1Q5BKU9 147 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms