RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 E7EQL1 145 aa12.43□□□□□ -0.42
USP43-201ENST00000285199 ORMDL2Q53FV1 153 aa12.43□□□□□ -0.42
USP43-201ENST00000285199 ZNF491Q8N8L2 437 aa12.43□□□□□ -0.42
USP43-201ENST00000285199 HIVEP3Q5T1R4 2406 aa12.43□□□□□ -0.42
USP43-201ENST00000285199 C9JAW5 83 aa12.43□□□□□ -0.42
USP43-201ENST00000285199 SUMO2P61956 95 aaKnown RBP12.43□□□□□ -0.42
USP43-201ENST00000285199 PRR30Q53SZ7 412 aaPredicted RBP12.43□□□□□ -0.42
USP43-201ENST00000285199 DLX4Q92988 240 aaPredicted RBP12.43□□□□□ -0.42
USP43-201ENST00000285199 LINC00477Q96M19 166 aa12.43□□□□□ -0.42
USP43-201ENST00000285199 CHD8Q9HCK8 2581 aa12.43□□□□□ -0.42
USP43-201ENST00000285199 TRBV25-1A0A075B6N4 114 aa12.42□□□□□ -0.42
USP43-201ENST00000285199 H7C1H1 209 aa12.42□□□□□ -0.42
USP43-201ENST00000285199 IGKV1-17P01599 117 aa12.42□□□□□ -0.42
USP43-201ENST00000285199 HLA-DRB4P13762 266 aa12.42□□□□□ -0.42
USP43-201ENST00000285199 LINC01545Q5VT33 79 aa12.42□□□□□ -0.42
USP43-201ENST00000285199 HLA-DRB4X5D2U9 266 aa12.42□□□□□ -0.42
USP43-201ENST00000285199 A0A1W2PNU3 283 aaPredicted RBP12.42□□□□□ -0.42
USP43-201ENST00000285199 TEX36Q5VZQ5 186 aa12.42□□□□□ -0.42
USP43-201ENST00000285199 BRD3OSQ6XYD6 125 aa12.42□□□□□ -0.42
USP43-201ENST00000285199 VCX2Q9H322 139 aa12.42□□□□□ -0.42
USP43-201ENST00000285199 PRSS46E5RG02 174 aa12.42□□□□□ -0.42
USP43-201ENST00000285199 LAMA1P25391 3075 aa12.42□□□□□ -0.42
USP43-201ENST00000285199 GP9P14770 177 aa12.41□□□□□ -0.42
USP43-201ENST00000285199 PRSS33Q8NF86 280 aa12.41□□□□□ -0.42
USP43-201ENST00000285199 GAGE2BQ13066 116 aa12.41□□□□□ -0.42
USP43-201ENST00000285199 GAGE2EQ4V326 116 aa12.41□□□□□ -0.42
USP43-201ENST00000285199 ZNF562Q6V9R5 426 aa12.41□□□□□ -0.42
USP43-201ENST00000285199 VMO1Q7Z5L0 202 aa12.41□□□□□ -0.42
USP43-201ENST00000285199 SLC50A1Q9BRV3 221 aa12.41□□□□□ -0.42
USP43-201ENST00000285199 GAGE2DQ9UEU5 116 aa12.41□□□□□ -0.42
USP43-201ENST00000285199 SMPXQ9UHP9 88 aa12.41□□□□□ -0.42
USP43-201ENST00000285199 TRAV21A0A0B4J279 112 aa12.4□□□□□ -0.42
USP43-201ENST00000285199 THAP8Q8NA92 274 aa12.4□□□□□ -0.42
USP43-201ENST00000285199 FAM215AQ9Y5M1 114 aa12.4□□□□□ -0.42
USP43-201ENST00000285199 ZNF688P0C7X2 276 aa12.4□□□□□ -0.42
USP43-201ENST00000285199 C2orf66Q6UXQ4 117 aa12.4□□□□□ -0.42
USP43-201ENST00000285199 Q8N7P7 452 aa12.4□□□□□ -0.42
USP43-201ENST00000285199 SIGLEC15Q6ZMC9 328 aa12.4□□□□□ -0.42
USP43-201ENST00000285199 NBEAQ8NFP9 2946 aa12.4□□□□□ -0.42
USP43-201ENST00000285199 SZT2Q5T011 3432 aa12.4□□□□□ -0.43
USP43-201ENST00000285199 LYPD1Q8N2G4 141 aa12.4□□□□□ -0.43
USP43-201ENST00000285199 ERG28Q9UKR5 140 aa12.4□□□□□ -0.43
USP43-201ENST00000285199 FCN3O75636 299 aa12.39□□□□□ -0.43
USP43-201ENST00000285199 PAX8Q06710 450 aa12.39□□□□□ -0.43
USP43-201ENST00000285199 PRADC1Q9BSG0 188 aa12.39□□□□□ -0.43
USP43-201ENST00000285199 NPFFR1Q9GZQ6 430 aa12.39□□□□□ -0.43
USP43-201ENST00000285199 HIVEP2P31629 2446 aa12.39□□□□□ -0.43
USP43-201ENST00000285199 K7EM74 188 aa12.39□□□□□ -0.43
USP43-201ENST00000285199 C12orf74Q32Q52 190 aa12.39□□□□□ -0.43
USP43-201ENST00000285199 TOMM7Q9P0U1 55 aa12.39□□□□□ -0.43
USP43-201ENST00000285199 PLNP26678 52 aa12.39□□□□□ -0.43
USP43-201ENST00000285199 DYNAPQ8N1N2 210 aa12.39□□□□□ -0.43
USP43-201ENST00000285199 GATA4P43694 442 aa12.38□□□□□ -0.43
USP43-201ENST00000285199 KLHL30-AS1Q8NEE0 82 aa12.38□□□□□ -0.43
USP43-201ENST00000285199 ZNF625Q96I27 306 aaPredicted RBP12.38□□□□□ -0.43
USP43-201ENST00000285199 CEND1Q8N111 149 aa12.38□□□□□ -0.43
USP43-201ENST00000285199 MBD6Q96DN6 1003 aa12.38□□□□□ -0.43
USP43-201ENST00000285199 SPXQ9BT56 116 aa12.38□□□□□ -0.43
USP43-201ENST00000285199 DEFB1P60022 68 aa12.38□□□□□ -0.43
USP43-201ENST00000285199 ADARB2-AS1A8MUL3 147 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 VWC2LB2RUY7 222 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 PAX1P15863 534 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 PSMG4Q5JS54 123 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 ZFAND6Q6FIF0 208 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 TNFRSF14Q92956 283 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 DKK4Q9UBT3 224 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 FOXE3Q13461 319 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 TNFRSF18Q9Y5U5 241 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 IGKV1D-37A0A075B6S9 117 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 H3BRN7 92 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 ZNF876PQ49A33 203 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 DUX5Q96PT3 197 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 SPTBN4Q9H254 2564 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 F6UB75 175 aa12.37□□□□□ -0.43
USP43-201ENST00000285199 PPP1R17O96001 155 aa12.36□□□□□ -0.43
USP43-201ENST00000285199 C10orf126Q8N4M7 172 aa12.36□□□□□ -0.43
USP43-201ENST00000285199 C1orf159Q96HA4 380 aa12.36□□□□□ -0.43
USP43-201ENST00000285199 LHBP01229 141 aa12.36□□□□□ -0.43
USP43-201ENST00000285199 C22orf34Q6ZV56 151 aa12.36□□□□□ -0.43
USP43-201ENST00000285199 PKD1L2Q7Z442 2459 aa12.36□□□□□ -0.43
USP43-201ENST00000285199 OR13C6PQ8NH95 151 aa12.36□□□□□ -0.43
USP43-201ENST00000285199 PTH2Q96A98 100 aa12.36□□□□□ -0.43
USP43-201ENST00000285199 TP53TG1Q9Y2A0 90 aa12.36□□□□□ -0.43
USP43-201ENST00000285199 FN1P02751 2386 aaKnown RBP12.36□□□□□ -0.43
USP43-201ENST00000285199 Q8N976 141 aa12.35□□□□□ -0.43
USP43-201ENST00000285199 NAV2Q8IVL1 2488 aa12.35□□□□□ -0.43
USP43-201ENST00000285199 KNCNA6PVL3 124 aa12.35□□□□□ -0.43
USP43-201ENST00000285199 DYNLRB2Q8TF09 96 aa12.35□□□□□ -0.43
USP43-201ENST00000285199 CFHR4Q92496 578 aa12.35□□□□□ -0.43
USP43-201ENST00000285199 ATP6V0BQ99437 205 aa12.35□□□□□ -0.43
USP43-201ENST00000285199 PRAC2D3DTV9 90 aa12.34□□□□□ -0.43
USP43-201ENST00000285199 EIF4EBP1Q13541 118 aaPredicted RBP12.34□□□□□ -0.43
USP43-201ENST00000285199 DPH3P1Q9H4G8 78 aa12.34□□□□□ -0.43
USP43-201ENST00000285199 TRBV20-1A0A075B6N2 111 aa12.34□□□□□ -0.43
USP43-201ENST00000285199 ATP6V0E1O15342 81 aa12.34□□□□□ -0.43
USP43-201ENST00000285199 CD28P10747 220 aa12.34□□□□□ -0.43
USP43-201ENST00000285199 PDE6HQ13956 83 aa12.34□□□□□ -0.43
USP43-201ENST00000285199 Q8N8P6 123 aa12.34□□□□□ -0.43
USP43-201ENST00000285199 A0A1B0GXF2 115 aa12.34□□□□□ -0.43
USP43-201ENST00000285199 SCGB1A1P11684 91 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms