RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 PRR27Q6MZM9 219 aa15.7■□□□□ 0.1
CCNE1-201ENST00000262643 KCNIP4Q6PIL6 250 aa15.7■□□□□ 0.1
CCNE1-201ENST00000262643 PSG8Q9UQ74 426 aa15.7■□□□□ 0.1
CCNE1-201ENST00000262643 APOC4P55056 127 aa15.69■□□□□ 0.1
CCNE1-201ENST00000262643 FAM3BP58499 235 aaPredicted RBP15.69■□□□□ 0.1
CCNE1-201ENST00000262643 DEFB131AP59861 70 aa15.69■□□□□ 0.1
CCNE1-201ENST00000262643 TRAV2A0A0B4J234 112 aa15.68■□□□□ 0.1
CCNE1-201ENST00000262643 A0A1W2PPQ1 181 aa15.68■□□□□ 0.1
CCNE1-201ENST00000262643 PRAC2D3DTV9 90 aa15.68■□□□□ 0.1
CCNE1-201ENST00000262643 MEOX2P50222 304 aa15.68■□□□□ 0.1
CCNE1-201ENST00000262643 ZFP82Q8N141 532 aa15.68■□□□□ 0.1
CCNE1-201ENST00000262643 C16orf92Q96LL3 132 aa15.68■□□□□ 0.1
CCNE1-201ENST00000262643 V9GYV3 84 aa15.68■□□□□ 0.1
CCNE1-201ENST00000262643 C1orf196B1AJZ1 125 aa15.68■□□□□ 0.1
CCNE1-201ENST00000262643 K7EQG2 157 aa15.68■□□□□ 0.1
CCNE1-201ENST00000262643 IBA57Q5T440 356 aaKnown RBP15.68■□□□□ 0.1
CCNE1-201ENST00000262643 IMMP2LQ96T52 175 aa15.68■□□□□ 0.1
CCNE1-201ENST00000262643 EDA2RQ9HAV5 297 aa15.68■□□□□ 0.1
CCNE1-201ENST00000262643 OSTCQ9NRP0 149 aa15.68■□□□□ 0.1
CCNE1-201ENST00000262643 ZNF688P0C7X2 276 aa15.67■□□□□ 0.1
CCNE1-201ENST00000262643 ARL6IP6Q8N6S5 226 aa15.67■□□□□ 0.1
CCNE1-201ENST00000262643 MUC7Q8TAX7 377 aa15.67■□□□□ 0.1
CCNE1-201ENST00000262643 DCANP1Q8TF63 244 aa15.67■□□□□ 0.1
CCNE1-201ENST00000262643 SMIM12Q96EX1 92 aa15.67■□□□□ 0.1
CCNE1-201ENST00000262643 VGLL1Q99990 258 aa15.67■□□□□ 0.1
CCNE1-201ENST00000262643 TRBV6-1A0A0K0K1D8 114 aa15.67■□□□□ 0.1
CCNE1-201ENST00000262643 TMEM183AQ8IXX5 376 aa15.67■□□□□ 0.1
CCNE1-201ENST00000262643 PYGO2Q9BRQ0 406 aa15.67■□□□□ 0.1
CCNE1-201ENST00000262643 KMT2CQ8NEZ4 4911 aaKnown RBP15.66■□□□□ 0.1
CCNE1-201ENST00000262643 NUDT10Q8NFP7 164 aa15.66■□□□□ 0.1
CCNE1-201ENST00000262643 NUDT11Q96G61 164 aa15.66■□□□□ 0.1
CCNE1-201ENST00000262643 NRN1Q9NPD7 142 aa15.66■□□□□ 0.1
CCNE1-201ENST00000262643 SERTM2A0A1B0GWG4 89 aa15.65■□□□□ 0.1
CCNE1-201ENST00000262643 RAB5BP61020 215 aa15.65■□□□□ 0.1
CCNE1-201ENST00000262643 ERCC8Q13216 396 aa15.65■□□□□ 0.1
CCNE1-201ENST00000262643 DEFB135Q30KP9 77 aa15.65■□□□□ 0.1
CCNE1-201ENST00000262643 C20orf173Q96LM9 149 aa15.65■□□□□ 0.1
CCNE1-201ENST00000262643 OVOL2Q9BRP0 275 aa15.65■□□□□ 0.1
CCNE1-201ENST00000262643 IL36BQ9NZH7 164 aa15.65■□□□□ 0.1
CCNE1-201ENST00000262643 LOC105371267A0A1B0GV96 52 aa15.65■□□□□ 0.1
CCNE1-201ENST00000262643 SOCS3O14543 225 aa15.65■□□□□ 0.1
CCNE1-201ENST00000262643 ZFP30Q9Y2G7 519 aa15.65■□□□□ 0.1
CCNE1-201ENST00000262643 KIR2DL5BA0A0G2JN68 375 aa15.64■□□□□ 0.09
CCNE1-201ENST00000262643 KIR2DL5BA0A0G2JPC4 375 aa15.64■□□□□ 0.09
CCNE1-201ENST00000262643 ZNF705GA8MUZ8 300 aaPredicted RBP15.64■□□□□ 0.09
CCNE1-201ENST00000262643 KIR2DL5AQ8N109 375 aa15.64■□□□□ 0.09
CCNE1-201ENST00000262643 KIR2DL5BQ8NHK3 375 aa15.64■□□□□ 0.09
CCNE1-201ENST00000262643 C8orf49Q96NF6 230 aa15.64■□□□□ 0.09
CCNE1-201ENST00000262643 AGRNO00468 2067 aa15.63■□□□□ 0.09
CCNE1-201ENST00000262643 CA1P00915 261 aaPredicted RBP15.63■□□□□ 0.09
CCNE1-201ENST00000262643 FAM231DQ6ZW35 169 aa15.63■□□□□ 0.09
CCNE1-201ENST00000262643 Q8TAT8 98 aa15.63■□□□□ 0.09
CCNE1-201ENST00000262643 C3orf84H3BNL1 204 aa15.63■□□□□ 0.09
CCNE1-201ENST00000262643 UBE2CO00762 179 aa15.63■□□□□ 0.09
CCNE1-201ENST00000262643 Q6ZWC4 215 aa15.63■□□□□ 0.09
CCNE1-201ENST00000262643 ZC2HC1AQ96GY0 325 aa15.63■□□□□ 0.09
CCNE1-201ENST00000262643 PSMG4Q5JS54 123 aa15.62■□□□□ 0.09
CCNE1-201ENST00000262643 CSTL1Q9H114 145 aa15.62■□□□□ 0.09
CCNE1-201ENST00000262643 GATCO43716 136 aaKnown RBP15.61■□□□□ 0.09
CCNE1-201ENST00000262643 SPRY2O43597 315 aa15.61■□□□□ 0.09
CCNE1-201ENST00000262643 TRGC2P03986 189 aa15.61■□□□□ 0.09
CCNE1-201ENST00000262643 STHQ8IWL8 128 aa15.61■□□□□ 0.09
CCNE1-201ENST00000262643 MRPL53Q96EL3 112 aaKnown RBP15.61■□□□□ 0.09
CCNE1-201ENST00000262643 BIN3Q9NQY0 253 aa15.61■□□□□ 0.09
CCNE1-201ENST00000262643 C19orf71A6NCJ1 209 aa15.6■□□□□ 0.09
CCNE1-201ENST00000262643 KNCNA6PVL3 124 aa15.6■□□□□ 0.09
CCNE1-201ENST00000262643 ZNF705DP0CH99 300 aaPredicted RBP15.6■□□□□ 0.09
CCNE1-201ENST00000262643 ZNF705BP0CI00 300 aaPredicted RBP15.6■□□□□ 0.09
CCNE1-201ENST00000262643 CRIP1P50238 77 aa15.6■□□□□ 0.09
CCNE1-201ENST00000262643 ZNF738Q8NE65 137 aa15.6■□□□□ 0.09
CCNE1-201ENST00000262643 CLEC5AQ9NY25 188 aa15.6■□□□□ 0.09
CCNE1-201ENST00000262643 TCL1AP56279 114 aa15.6■□□□□ 0.09
CCNE1-201ENST00000262643 DEFB1P60022 68 aa15.6■□□□□ 0.09
CCNE1-201ENST00000262643 SNRPD3P62318 126 aaKnown RBP15.6■□□□□ 0.09
CCNE1-201ENST00000262643 ZFAND6Q6FIF0 208 aa15.6■□□□□ 0.09
CCNE1-201ENST00000262643 AGPAT4-IT1Q9H0P7 198 aa15.6■□□□□ 0.09
CCNE1-201ENST00000262643 RBAKDNA6NC62 111 aa15.59■□□□□ 0.09
CCNE1-201ENST00000262643 ACTL10Q5JWF8 245 aa15.59■□□□□ 0.09
CCNE1-201ENST00000262643 CASC10Q5T4H9 136 aa15.59■□□□□ 0.09
CCNE1-201ENST00000262643 DAZAP1Q96EP5 407 aaKnown RBP15.59■□□□□ 0.09
CCNE1-201ENST00000262643 BTF3L4Q96K17 158 aa15.59■□□□□ 0.09
CCNE1-201ENST00000262643 ZNF492Q9P255 531 aa15.59■□□□□ 0.09
CCNE1-201ENST00000262643 TP53TG1Q9Y2A0 90 aa15.59■□□□□ 0.09
CCNE1-201ENST00000262643 TYMSP04818 313 aa15.58■□□□□ 0.09
CCNE1-201ENST00000262643 RNF183Q96D59 192 aa15.58■□□□□ 0.09
CCNE1-201ENST00000262643 P01737 135 aa15.58■□□□□ 0.08
CCNE1-201ENST00000262643 SAPCD1Q5SSQ6 148 aa15.58■□□□□ 0.08
CCNE1-201ENST00000262643 CSMD3Q7Z407 3707 aa15.57■□□□□ 0.08
CCNE1-201ENST00000262643 TRAV9-1A0A075B6T8 112 aa15.57■□□□□ 0.08
CCNE1-201ENST00000262643 FBLL1A6NHQ2 334 aaKnown RBP15.57■□□□□ 0.08
CCNE1-201ENST00000262643 SMIM27A0A1W2PRY6 76 aa15.56■□□□□ 0.08
CCNE1-201ENST00000262643 SPINK4O60575 86 aa15.56■□□□□ 0.08
CCNE1-201ENST00000262643 TRPT1Q86TN4 253 aaKnown RBP15.56■□□□□ 0.08
CCNE1-201ENST00000262643 RPP21Q9H633 154 aaKnown RBP15.56■□□□□ 0.08
CCNE1-201ENST00000262643 F6UB75 175 aa15.55■□□□□ 0.08
CCNE1-201ENST00000262643 C9orf47Q6ZRZ4 202 aa15.55■□□□□ 0.08
CCNE1-201ENST00000262643 STARD9Q9P2P6 4700 aa15.55■□□□□ 0.08
CCNE1-201ENST00000262643 ZNF80P51504 273 aaPredicted RBP15.55■□□□□ 0.08
CCNE1-201ENST00000262643 TMEM78Q5T7P6 136 aa15.55■□□□□ 0.08
CCNE1-201ENST00000262643 COX8CQ7Z4L0 72 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms