RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 GOLT1BQ9Y3E0 138 aa14.34□□□□□ -0.11
PDLIM4-201ENST00000253754 A6NDX4 124 aa14.33□□□□□ -0.12
PDLIM4-201ENST00000253754 FAM223BA6NKX1 122 aa14.33□□□□□ -0.12
PDLIM4-201ENST00000253754 ZNF25P17030 456 aaPredicted RBP14.33□□□□□ -0.12
PDLIM4-201ENST00000253754 ARL3P36405 182 aa14.33□□□□□ -0.12
PDLIM4-201ENST00000253754 FAM223AQ8IWN6 122 aa14.33□□□□□ -0.12
PDLIM4-201ENST00000253754 KLK15Q9H2R5 256 aa14.33□□□□□ -0.12
PDLIM4-201ENST00000253754 ORM1P02763 201 aa14.32□□□□□ -0.12
PDLIM4-201ENST00000253754 TIMM8BQ9Y5J9 83 aaPredicted RBP14.32□□□□□ -0.12
PDLIM4-201ENST00000253754 U3KQE9 123 aa14.32□□□□□ -0.12
PDLIM4-201ENST00000253754 A0A1B0GW15 77 aa14.32□□□□□ -0.12
PDLIM4-201ENST00000253754 M0R143 59 aa14.32□□□□□ -0.12
PDLIM4-201ENST00000253754 IGF1P05019 195 aa14.32□□□□□ -0.12
PDLIM4-201ENST00000253754 ZNF493Q6ZR52 646 aa14.32□□□□□ -0.12
PDLIM4-201ENST00000253754 SLC50A1Q9BRV3 221 aa14.32□□□□□ -0.12
PDLIM4-201ENST00000253754 FBLL1A6NHQ2 334 aaKnown RBP14.31□□□□□ -0.12
PDLIM4-201ENST00000253754 PPIFP30405 207 aaKnown RBP14.31□□□□□ -0.12
PDLIM4-201ENST00000253754 BMI1P35226 326 aa14.31□□□□□ -0.12
PDLIM4-201ENST00000253754 MRPL52Q86TS9 123 aaKnown RBP14.31□□□□□ -0.12
PDLIM4-201ENST00000253754 FER1L6-AS1Q8NA97 138 aa14.31□□□□□ -0.12
PDLIM4-201ENST00000253754 TMEM208Q9BTX3 173 aa14.31□□□□□ -0.12
PDLIM4-201ENST00000253754 AGPAT4-IT1Q9H0P7 198 aa14.31□□□□□ -0.12
PDLIM4-201ENST00000253754 D6R8Y8 96 aa14.31□□□□□ -0.12
PDLIM4-201ENST00000253754 LEPROTL1O95214 131 aa14.31□□□□□ -0.12
PDLIM4-201ENST00000253754 TMEM70Q9BUB7 260 aa14.31□□□□□ -0.12
PDLIM4-201ENST00000253754 MXRA5Q9NR99 2828 aa14.3□□□□□ -0.12
PDLIM4-201ENST00000253754 J3QLI3 93 aa14.3□□□□□ -0.12
PDLIM4-201ENST00000253754 SMAD7O15105 426 aaKnown RBP14.3□□□□□ -0.12
PDLIM4-201ENST00000253754 IGHG2P01859 326 aa14.3□□□□□ -0.12
PDLIM4-201ENST00000253754 WFDC11Q8NEX6 87 aa14.3□□□□□ -0.12
PDLIM4-201ENST00000253754 TWIST1Q15672 202 aa14.3□□□□□ -0.12
PDLIM4-201ENST00000253754 FAM106AQ4KMX7 169 aa14.3□□□□□ -0.12
PDLIM4-201ENST00000253754 MCRIP2Q9BUT9 160 aaKnown RBP14.3□□□□□ -0.12
PDLIM4-201ENST00000253754 MSRB1Q9NZV6 116 aa14.3□□□□□ -0.12
PDLIM4-201ENST00000253754 IGLC6P0CF74 106 aa14.29□□□□□ -0.12
PDLIM4-201ENST00000253754 FAM104BQ5XKR9 115 aa14.29□□□□□ -0.12
PDLIM4-201ENST00000253754 Q6ZQT7 251 aa14.29□□□□□ -0.12
PDLIM4-201ENST00000253754 SELENOKQ9Y6D0 94 aa14.29□□□□□ -0.12
PDLIM4-201ENST00000253754 LOC389332A0A1B0GUA5 103 aa14.29□□□□□ -0.12
PDLIM4-201ENST00000253754 SMKR1H3BMG3 65 aa14.29□□□□□ -0.12
PDLIM4-201ENST00000253754 IGLC3P0DOY3 106 aa14.29□□□□□ -0.12
PDLIM4-201ENST00000253754 PF4V1P10720 104 aa14.29□□□□□ -0.12
PDLIM4-201ENST00000253754 RBAKDNA6NC62 111 aa14.28□□□□□ -0.12
PDLIM4-201ENST00000253754 FABP5P3A8MUU1 101 aa14.28□□□□□ -0.12
PDLIM4-201ENST00000253754 TMEM95Q3KNT9 176 aa14.28□□□□□ -0.12
PDLIM4-201ENST00000253754 GLMPQ8WWB7 406 aa14.28□□□□□ -0.12
PDLIM4-201ENST00000253754 C11orf21Q9P2W6 132 aa14.28□□□□□ -0.12
PDLIM4-201ENST00000253754 H0Y8G0 127 aa14.27□□□□□ -0.12
PDLIM4-201ENST00000253754 SYS1-DBNDD2H3BUS1 97 aa14.27□□□□□ -0.12
PDLIM4-201ENST00000253754 IFI27P40305 119 aaPredicted RBP14.27□□□□□ -0.12
PDLIM4-201ENST00000253754 MRPL51Q4U2R6 128 aaKnown RBP14.27□□□□□ -0.12
PDLIM4-201ENST00000253754 C20orf173Q96LM9 149 aa14.27□□□□□ -0.12
PDLIM4-201ENST00000253754 M0QZK8 103 aa14.27□□□□□ -0.13
PDLIM4-201ENST00000253754 RPS20P60866 119 aaKnown RBP14.27□□□□□ -0.13
PDLIM4-201ENST00000253754 PRSS3P2Q8NHM4 247 aa14.27□□□□□ -0.13
PDLIM4-201ENST00000253754 C16orf92Q96LL3 132 aa14.27□□□□□ -0.13
PDLIM4-201ENST00000253754 AP5S1Q9NUS5 200 aa14.27□□□□□ -0.13
PDLIM4-201ENST00000253754 NCR2O95944 276 aa14.26□□□□□ -0.13
PDLIM4-201ENST00000253754 BATFQ16520 125 aa14.26□□□□□ -0.13
PDLIM4-201ENST00000253754 SONP18583 2426 aaKnown RBP14.26□□□□□ -0.13
PDLIM4-201ENST00000253754 TRAV9-2A0A087WT02 112 aa14.26□□□□□ -0.13
PDLIM4-201ENST00000253754 NPSP0C0P6 89 aa14.26□□□□□ -0.13
PDLIM4-201ENST00000253754 DEFB1P60022 68 aa14.26□□□□□ -0.13
PDLIM4-201ENST00000253754 TMEM78Q5T7P6 136 aa14.26□□□□□ -0.13
PDLIM4-201ENST00000253754 GPHB5Q86YW7 130 aa14.26□□□□□ -0.13
PDLIM4-201ENST00000253754 PRELID3AQ96N28 172 aa14.26□□□□□ -0.13
PDLIM4-201ENST00000253754 IGKV3D-20A0A0C4DH25 116 aa14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 CRXO43186 299 aaPredicted RBP14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 IGLL1P15814 213 aa14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 FA2HQ7L5A8 372 aa14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 OR4X2Q8NGF9 303 aa14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 ATP6V0BQ99437 205 aa14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 SIGLEC8Q9NYZ4 499 aa14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 UQCR10Q9UDW1 63 aa14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 U3KQK5 164 aa14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 OR4C46A6NHA9 309 aa14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 COTL1Q14019 142 aa14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 DEFB112Q30KQ8 113 aa14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 LINC01559Q495D7 138 aa14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 Q6ZN92 141 aa14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 TP73-AS1Q9UF72 201 aa14.25□□□□□ -0.13
PDLIM4-201ENST00000253754 NDUFA4O00483 81 aa14.24□□□□□ -0.13
PDLIM4-201ENST00000253754 FXYD7P58549 80 aa14.24□□□□□ -0.13
PDLIM4-201ENST00000253754 FOXE3Q13461 319 aa14.24□□□□□ -0.13
PDLIM4-201ENST00000253754 ORMDL3Q8N138 153 aa14.24□□□□□ -0.13
PDLIM4-201ENST00000253754 PMCHL2Q9BQD1 86 aa14.24□□□□□ -0.13
PDLIM4-201ENST00000253754 CUBNO60494 3623 aa14.24□□□□□ -0.13
PDLIM4-201ENST00000253754 GAS8-AS1O95177 125 aa14.24□□□□□ -0.13
PDLIM4-201ENST00000253754 IGHV4-59P01825 116 aa14.24□□□□□ -0.13
PDLIM4-201ENST00000253754 RPLP1P05386 114 aaKnown RBP14.24□□□□□ -0.13
PDLIM4-201ENST00000253754 OR5AL1P0C617 328 aa14.24□□□□□ -0.13
PDLIM4-201ENST00000253754 SRSF2Q01130 221 aaKnown RBP14.24□□□□□ -0.13
PDLIM4-201ENST00000253754 IGKV3-7A0A075B6H7 116 aa14.23□□□□□ -0.13
PDLIM4-201ENST00000253754 PRR9Q5T870 116 aa14.23□□□□□ -0.13
PDLIM4-201ENST00000253754 MRPL53Q96EL3 112 aaKnown RBP14.23□□□□□ -0.13
PDLIM4-201ENST00000253754 USMG5Q96IX5 58 aa14.23□□□□□ -0.13
PDLIM4-201ENST00000253754 A0A096LNJ9 63 aa14.22□□□□□ -0.13
PDLIM4-201ENST00000253754 hDV102S1A0JD36 115 aa14.22□□□□□ -0.13
PDLIM4-201ENST00000253754 J3KRW8 73 aa14.22□□□□□ -0.13
PDLIM4-201ENST00000253754 NPYP01303 97 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms