RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 PCP2Q8IVA1 136 aa14.3□□□□□ -0.12
LRP3-201ENST00000253193 SLC50A1Q9BRV3 221 aa14.3□□□□□ -0.12
LRP3-201ENST00000253193 AGPAT4-IT1Q9H0P7 198 aa14.3□□□□□ -0.12
LRP3-201ENST00000253193 ACACBO00763 2458 aa14.29□□□□□ -0.12
LRP3-201ENST00000253193 FBLL1A6NHQ2 334 aaKnown RBP14.29□□□□□ -0.12
LRP3-201ENST00000253193 PF4V1P10720 104 aa14.29□□□□□ -0.12
LRP3-201ENST00000253193 FBXL19-AS1Q494R0 122 aa14.29□□□□□ -0.12
LRP3-201ENST00000253193 PIP4P2Q8N4L2 257 aa14.29□□□□□ -0.12
LRP3-201ENST00000253193 TMEM158Q8WZ71 300 aa14.29□□□□□ -0.12
LRP3-201ENST00000253193 GTSCR1Q86UQ5 136 aa14.29□□□□□ -0.12
LRP3-201ENST00000253193 DEFB104AQ8WTQ1 72 aa14.29□□□□□ -0.12
LRP3-201ENST00000253193 COL25A1Q9BXS0 654 aaPredicted RBP14.29□□□□□ -0.12
LRP3-201ENST00000253193 FAM208BQ5VWN6 2430 aa14.29□□□□□ -0.12
LRP3-201ENST00000253193 GAS8-AS1O95177 125 aa14.29□□□□□ -0.12
LRP3-201ENST00000253193 UBE2E1P51965 193 aa14.29□□□□□ -0.12
LRP3-201ENST00000253193 ZNF493Q6ZR52 646 aa14.29□□□□□ -0.12
LRP3-201ENST00000253193 NOTCH3Q9UM47 2321 aa14.28□□□□□ -0.12
LRP3-201ENST00000253193 BUB3O43684 328 aa14.28□□□□□ -0.12
LRP3-201ENST00000253193 PPBPP02775 128 aa14.28□□□□□ -0.12
LRP3-201ENST00000253193 DTX2Q86UW9 622 aa14.28□□□□□ -0.12
LRP3-201ENST00000253193 TTTY13Q9BZ97 58 aa14.28□□□□□ -0.12
LRP3-201ENST00000253193 EFNA4P52798 201 aa14.28□□□□□ -0.12
LRP3-201ENST00000253193 ZNF502Q8TBZ5 544 aa14.28□□□□□ -0.12
LRP3-201ENST00000253193 NPFFO15130 113 aa14.27□□□□□ -0.12
LRP3-201ENST00000253193 GTF2H5Q6ZYL4 71 aa14.27□□□□□ -0.12
LRP3-201ENST00000253193 NXT2Q9NPJ8 142 aaKnown RBP14.27□□□□□ -0.12
LRP3-201ENST00000253193 A0A096LNJ9 63 aa14.27□□□□□ -0.13
LRP3-201ENST00000253193 ARL3P36405 182 aa14.27□□□□□ -0.13
LRP3-201ENST00000253193 LGALS9BQ3B8N2 356 aa14.27□□□□□ -0.13
LRP3-201ENST00000253193 LGALS9CQ6DKI2 356 aa14.27□□□□□ -0.13
LRP3-201ENST00000253193 SRD5A1P18405 259 aa14.27□□□□□ -0.13
LRP3-201ENST00000253193 PAX8Q06710 450 aa14.27□□□□□ -0.13
LRP3-201ENST00000253193 C8orf86Q6ZUL3 223 aa14.27□□□□□ -0.13
LRP3-201ENST00000253193 TMEM190Q8WZ59 177 aa14.27□□□□□ -0.13
LRP3-201ENST00000253193 JMJD8Q96S16 334 aa14.27□□□□□ -0.13
LRP3-201ENST00000253193 SMAD7O15105 426 aaKnown RBP14.26□□□□□ -0.13
LRP3-201ENST00000253193 C16orf54Q6UWD8 224 aa14.26□□□□□ -0.13
LRP3-201ENST00000253193 TRAV40A0A0B4J280 105 aa14.26□□□□□ -0.13
LRP3-201ENST00000253193 C1orf122Q6ZSJ8 110 aa14.26□□□□□ -0.13
LRP3-201ENST00000253193 WFDC12Q8WWY7 111 aa14.26□□□□□ -0.13
LRP3-201ENST00000253193 OR10J6PQ8NGY7 276 aa14.26□□□□□ -0.13
LRP3-201ENST00000253193 MEGF9Q9H1U4 602 aa14.26□□□□□ -0.13
LRP3-201ENST00000253193 TRAV41A0A0B4J266 112 aa14.25□□□□□ -0.13
LRP3-201ENST00000253193 SEC11AP67812 179 aa14.25□□□□□ -0.13
LRP3-201ENST00000253193 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.25□□□□□ -0.13
LRP3-201ENST00000253193 PHLDA3Q9Y5J5 127 aa14.25□□□□□ -0.13
LRP3-201ENST00000253193 DEFB1P60022 68 aa14.25□□□□□ -0.13
LRP3-201ENST00000253193 KIR3DS1Q14943 382 aa14.25□□□□□ -0.13
LRP3-201ENST00000253193 ZC2HC1BQ5TFG8 222 aa14.24□□□□□ -0.13
LRP3-201ENST00000253193 OR2K2Q8NGT1 345 aa14.24□□□□□ -0.13
LRP3-201ENST00000253193 ZNF48Q96MX3 618 aaPredicted RBP14.24□□□□□ -0.13
LRP3-201ENST00000253193 USP9YO00507 2555 aaPredicted RBP14.24□□□□□ -0.13
LRP3-201ENST00000253193 A0A1W2PPR1 153 aa14.24□□□□□ -0.13
LRP3-201ENST00000253193 SMIM17P0DL12 118 aa14.24□□□□□ -0.13
LRP3-201ENST00000253193 SIRPDQ9H106 197 aa14.24□□□□□ -0.13
LRP3-201ENST00000253193 LCNL1Q6ZST4 164 aa14.23□□□□□ -0.13
LRP3-201ENST00000253193 IGKCP01834 107 aa14.23□□□□□ -0.13
LRP3-201ENST00000253193 C11orf71Q6IPW1 123 aa14.23□□□□□ -0.13
LRP3-201ENST00000253193 ARL6IP6Q8N6S5 226 aa14.23□□□□□ -0.13
LRP3-201ENST00000253193 FGF6P10767 208 aa14.23□□□□□ -0.13
LRP3-201ENST00000253193 RNASE4P34096 147 aaKnown RBP14.23□□□□□ -0.13
LRP3-201ENST00000253193 HSD52Q0P140 79 aa14.23□□□□□ -0.13
LRP3-201ENST00000253193 SORL1Q92673 2214 aa14.22□□□□□ -0.13
LRP3-201ENST00000253193 F5H697 171 aa14.22□□□□□ -0.13
LRP3-201ENST00000253193 Q6ZQT7 251 aa14.22□□□□□ -0.13
LRP3-201ENST00000253193 OR1N2Q8NGR9 330 aa14.22□□□□□ -0.13
LRP3-201ENST00000253193 CCDC140Q96MF4 163 aa14.22□□□□□ -0.13
LRP3-201ENST00000253193 CENPVL3A0A0U1RRI6 287 aa14.22□□□□□ -0.13
LRP3-201ENST00000253193 K7EMI3 77 aa14.22□□□□□ -0.13
LRP3-201ENST00000253193 TRBV7-1A0A0A6YYK4 115 aa14.22□□□□□ -0.13
LRP3-201ENST00000253193 IGLC6P0CF74 106 aa14.22□□□□□ -0.13
LRP3-201ENST00000253193 RPL24P83731 157 aaKnown RBP14.22□□□□□ -0.13
LRP3-201ENST00000253193 K7ERU9 68 aa14.21□□□□□ -0.13
LRP3-201ENST00000253193 Q8N6K4 173 aa14.21□□□□□ -0.13
LRP3-201ENST00000253193 OR9G4Q8NGQ1 327 aa14.21□□□□□ -0.13
LRP3-201ENST00000253193 IGKV3D-20A0A0C4DH25 116 aa14.21□□□□□ -0.13
LRP3-201ENST00000253193 A0A0G2JLM5 398 aa14.21□□□□□ -0.13
LRP3-201ENST00000253193 TMEM8BA6NDV4 472 aa14.21□□□□□ -0.14
LRP3-201ENST00000253193 DPM2O94777 84 aa14.21□□□□□ -0.14
LRP3-201ENST00000253193 OR4X2Q8NGF9 303 aa14.21□□□□□ -0.14
LRP3-201ENST00000253193 C14orf178Q8N769 122 aaPredicted RBP14.2□□□□□ -0.14
LRP3-201ENST00000253193 IGKV3-20P01619 116 aa14.2□□□□□ -0.14
LRP3-201ENST00000253193 IGHG4P01861 327 aa14.2□□□□□ -0.14
LRP3-201ENST00000253193 NHP2Q9NX24 153 aaKnown RBP14.2□□□□□ -0.14
LRP3-201ENST00000253193 SPCS1Q9Y6A9 102 aa14.2□□□□□ -0.14
LRP3-201ENST00000253193 ATP5LO75964 103 aa14.19□□□□□ -0.14
LRP3-201ENST00000253193 FABP2P12104 132 aa14.19□□□□□ -0.14
LRP3-201ENST00000253193 LAGE3Q14657 143 aa14.19□□□□□ -0.14
LRP3-201ENST00000253193 MOB4Q9Y3A3 225 aa14.19□□□□□ -0.14
LRP3-201ENST00000253193 ZFAND3Q9H8U3 227 aa14.19□□□□□ -0.14
LRP3-201ENST00000253193 F6UB75 175 aa14.19□□□□□ -0.14
LRP3-201ENST00000253193 SMIM13P0DJ93 91 aa14.19□□□□□ -0.14
LRP3-201ENST00000253193 U3KQK5 164 aa14.19□□□□□ -0.14
LRP3-201ENST00000253193 EBI3Q14213 229 aa14.18□□□□□ -0.14
LRP3-201ENST00000253193 RNF185Q96GF1 192 aa14.18□□□□□ -0.14
LRP3-201ENST00000253193 C11orf21Q9P2W6 132 aa14.18□□□□□ -0.14
LRP3-201ENST00000253193 IGF1P05019 195 aa14.18□□□□□ -0.14
LRP3-201ENST00000253193 GNLYP22749 145 aa14.18□□□□□ -0.14
LRP3-201ENST00000253193 LINC01559Q495D7 138 aa14.18□□□□□ -0.14
LRP3-201ENST00000253193 SCGB3A1Q96QR1 104 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms