RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 KLF5Q13887 457 aaPredicted RBP13.03□□□□□ -0.32
HOXC6-201ENST00000243108 IGFL4Q6B9Z1 124 aa13.03□□□□□ -0.32
HOXC6-201ENST00000243108 LCN12Q6JVE5 192 aa13.03□□□□□ -0.32
HOXC6-201ENST00000243108 WDR73Q6P4I2 378 aa13.03□□□□□ -0.32
HOXC6-201ENST00000243108 MRPL53Q96EL3 112 aaKnown RBP13.03□□□□□ -0.32
HOXC6-201ENST00000243108 DAZAP1Q96EP5 407 aaKnown RBP13.03□□□□□ -0.32
HOXC6-201ENST00000243108 NEU1Q99519 415 aa13.03□□□□□ -0.32
HOXC6-201ENST00000243108 NAT8BQ9UHF3 227 aa13.03□□□□□ -0.32
HOXC6-201ENST00000243108 TRAV8-2A0A0B4J237 113 aa13.02□□□□□ -0.32
HOXC6-201ENST00000243108 MT-ND6P03923 174 aa13.02□□□□□ -0.32
HOXC6-201ENST00000243108 RASL11AQ6T310 242 aa13.02□□□□□ -0.32
HOXC6-201ENST00000243108 NUP35Q8NFH5 326 aa13.02□□□□□ -0.32
HOXC6-201ENST00000243108 ASCL2Q99929 193 aa13.02□□□□□ -0.32
HOXC6-201ENST00000243108 GFRA4Q9GZZ7 299 aa13.02□□□□□ -0.32
HOXC6-201ENST00000243108 RBAKDNA6NC62 111 aa13.02□□□□□ -0.33
HOXC6-201ENST00000243108 FAM231BA6NCW3 169 aa13.02□□□□□ -0.33
HOXC6-201ENST00000243108 IFITM10A6NMD0 228 aa13.02□□□□□ -0.33
HOXC6-201ENST00000243108 S100A8P05109 93 aa13.02□□□□□ -0.33
HOXC6-201ENST00000243108 GPHB5Q86YW7 130 aa13.02□□□□□ -0.33
HOXC6-201ENST00000243108 CLEC5AQ9NY25 188 aa13.02□□□□□ -0.33
HOXC6-201ENST00000243108 A0A1W2PS18 150 aa13.01□□□□□ -0.33
HOXC6-201ENST00000243108 HIGD1CA8MV81 97 aa13.01□□□□□ -0.33
HOXC6-201ENST00000243108 ZNF705FA8MVS1 300 aaPredicted RBP13.01□□□□□ -0.33
HOXC6-201ENST00000243108 K7EMT4 169 aa13.01□□□□□ -0.33
HOXC6-201ENST00000243108 PRB4P10163 310 aaPredicted RBP13.01□□□□□ -0.33
HOXC6-201ENST00000243108 SAPCD1Q5SSQ6 148 aa13.01□□□□□ -0.33
HOXC6-201ENST00000243108 TMEM136Q6ZRR5 245 aa13.01□□□□□ -0.33
HOXC6-201ENST00000243108 LINC00518Q8N0U6 118 aa13.01□□□□□ -0.33
HOXC6-201ENST00000243108 HIST3H2BBQ8N257 126 aa13.01□□□□□ -0.33
HOXC6-201ENST00000243108 MRPL18Q9H0U6 180 aaKnown RBP13.01□□□□□ -0.33
HOXC6-201ENST00000243108 SNURFLB1AK76 121 aa13□□□□□ -0.33
HOXC6-201ENST00000243108 SPINK4O60575 86 aa13□□□□□ -0.33
HOXC6-201ENST00000243108 CRIP1P50238 77 aa13□□□□□ -0.33
HOXC6-201ENST00000243108 SYNJ2BPP57105 145 aa13□□□□□ -0.33
HOXC6-201ENST00000243108 C8orf49Q96NF6 230 aa13□□□□□ -0.33
HOXC6-201ENST00000243108 VGLL1Q99990 258 aa13□□□□□ -0.33
HOXC6-201ENST00000243108 DAZ1Q9NQZ3 744 aaKnown RBP13□□□□□ -0.33
HOXC6-201ENST00000243108 IGHV7-4-1A0A0J9YVY3 117 aa12.99□□□□□ -0.33
HOXC6-201ENST00000243108 XKRY2A2RUG3 117 aa12.99□□□□□ -0.33
HOXC6-201ENST00000243108 IGLV1-51P01701 117 aa12.99□□□□□ -0.33
HOXC6-201ENST00000243108 FAM106AQ4KMX7 169 aa12.99□□□□□ -0.33
HOXC6-201ENST00000243108 GFI1BQ5VTD9 330 aa12.99□□□□□ -0.33
HOXC6-201ENST00000243108 MRPL54Q6P161 138 aaKnown RBP12.99□□□□□ -0.33
HOXC6-201ENST00000243108 ATP5L2Q7Z4Y8 100 aa12.99□□□□□ -0.33
HOXC6-201ENST00000243108 RNF182Q8N6D2 247 aa12.99□□□□□ -0.33
HOXC6-201ENST00000243108 GTSF1Q8WW33 167 aa12.99□□□□□ -0.33
HOXC6-201ENST00000243108 DNAH7Q8WXX0 4024 aa12.99□□□□□ -0.33
HOXC6-201ENST00000243108 PRAC2D3DTV9 90 aa12.99□□□□□ -0.33
HOXC6-201ENST00000243108 HLA-DQA1P01909 254 aa12.99□□□□□ -0.33
HOXC6-201ENST00000243108 OR9G4Q8NGQ1 327 aa12.99□□□□□ -0.33
HOXC6-201ENST00000243108 A0A1B0GXF2 115 aa12.98□□□□□ -0.33
HOXC6-201ENST00000243108 NHLRC4P0CG21 123 aaPredicted RBP12.98□□□□□ -0.33
HOXC6-201ENST00000243108 CT45A10P0DMU9 189 aa12.98□□□□□ -0.33
HOXC6-201ENST00000243108 TCF24Q7RTU0 167 aa12.98□□□□□ -0.33
HOXC6-201ENST00000243108 OR2D3Q8NGH3 330 aa12.98□□□□□ -0.33
HOXC6-201ENST00000243108 SOCS3O14543 225 aa12.97□□□□□ -0.33
HOXC6-201ENST00000243108 FOXA3P55318 350 aaPredicted RBP12.97□□□□□ -0.33
HOXC6-201ENST00000243108 TM4SF20Q53R12 229 aa12.97□□□□□ -0.33
HOXC6-201ENST00000243108 SBSPONQ8IVN8 264 aa12.97□□□□□ -0.33
HOXC6-201ENST00000243108 Q8N1Y9 231 aa12.97□□□□□ -0.33
HOXC6-201ENST00000243108 SMPXQ9UHP9 88 aa12.97□□□□□ -0.33
HOXC6-201ENST00000243108 U3KQK5 164 aa12.97□□□□□ -0.33
HOXC6-201ENST00000243108 CSN3P07498 182 aa12.96□□□□□ -0.33
HOXC6-201ENST00000243108 RBPMS2Q6ZRY4 209 aaKnown RBP12.96□□□□□ -0.33
HOXC6-201ENST00000243108 Q8TAT8 98 aa12.96□□□□□ -0.33
HOXC6-201ENST00000243108 RHPN1-AS1Q9BWJ2 59 aa12.96□□□□□ -0.33
HOXC6-201ENST00000243108 FAM162BQ5T6X4 162 aa12.96□□□□□ -0.34
HOXC6-201ENST00000243108 ADAMTSL5Q6ZMM2 481 aa12.96□□□□□ -0.34
HOXC6-201ENST00000243108 C16orf92Q96LL3 132 aa12.96□□□□□ -0.34
HOXC6-201ENST00000243108 WWC2-AS2Q96NR7 200 aa12.96□□□□□ -0.34
HOXC6-201ENST00000243108 UFC1Q9Y3C8 167 aa12.96□□□□□ -0.34
HOXC6-201ENST00000243108 RYR3Q15413 4870 aa12.95□□□□□ -0.34
HOXC6-201ENST00000243108 SH2D1AO60880 128 aa12.95□□□□□ -0.34
HOXC6-201ENST00000243108 ERCC8Q13216 396 aa12.95□□□□□ -0.34
HOXC6-201ENST00000243108 NDFIP1Q9BT67 221 aa12.95□□□□□ -0.34
HOXC6-201ENST00000243108 NRN1Q9NPD7 142 aa12.95□□□□□ -0.34
HOXC6-201ENST00000243108 PPP1R14DQ9NXH3 145 aa12.95□□□□□ -0.34
HOXC6-201ENST00000243108 SMIM6P0DI80 62 aa12.94□□□□□ -0.34
HOXC6-201ENST00000243108 EDN2P20800 178 aa12.94□□□□□ -0.34
HOXC6-201ENST00000243108 GDF5OSQ5U4N7 250 aa12.94□□□□□ -0.34
HOXC6-201ENST00000243108 C9orf47Q6ZRZ4 202 aa12.94□□□□□ -0.34
HOXC6-201ENST00000243108 A8MWP6 167 aa12.93□□□□□ -0.34
HOXC6-201ENST00000243108 RAB4BP61018 213 aa12.93□□□□□ -0.34
HOXC6-201ENST00000243108 PDZD11Q5EBL8 140 aa12.93□□□□□ -0.34
HOXC6-201ENST00000243108 PGLYRP4Q96LB8 373 aa12.93□□□□□ -0.34
HOXC6-201ENST00000243108 C20orf173Q96LM9 149 aa12.93□□□□□ -0.34
HOXC6-201ENST00000243108 AGPAT4-IT1Q9H0P7 198 aa12.93□□□□□ -0.34
HOXC6-201ENST00000243108 TMEM213A2RRL7 107 aa12.93□□□□□ -0.34
HOXC6-201ENST00000243108 LGALS9O00182 355 aa12.93□□□□□ -0.34
HOXC6-201ENST00000243108 GZMBP10144 247 aa12.93□□□□□ -0.34
HOXC6-201ENST00000243108 S100A2P29034 98 aa12.93□□□□□ -0.34
HOXC6-201ENST00000243108 BMI1P35226 326 aa12.93□□□□□ -0.34
HOXC6-201ENST00000243108 ZNF80P51504 273 aaPredicted RBP12.93□□□□□ -0.34
HOXC6-201ENST00000243108 HBBP68871 147 aa12.93□□□□□ -0.34
HOXC6-201ENST00000243108 HIST1H2BLQ99880 126 aa12.93□□□□□ -0.34
HOXC6-201ENST00000243108 APCSP02743 223 aa12.92□□□□□ -0.34
HOXC6-201ENST00000243108 CRISP2P16562 243 aa12.92□□□□□ -0.34
HOXC6-201ENST00000243108 ZNF138P52744 262 aa12.92□□□□□ -0.34
HOXC6-201ENST00000243108 Q0VG73 95 aa12.92□□□□□ -0.34
HOXC6-201ENST00000243108 Q6AWC8 147 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms