RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 RNF212Q495C1 297 aa9.76□□□□□ -0.85
DDX39A-201ENST00000242776 EBLN2Q6P2I7 272 aa9.76□□□□□ -0.85
DDX39A-201ENST00000242776 Q8N1X5 172 aa9.76□□□□□ -0.85
DDX39A-201ENST00000242776 C20orf173Q96LM9 149 aa9.76□□□□□ -0.85
DDX39A-201ENST00000242776 ATG101Q9BSB4 218 aa9.76□□□□□ -0.85
DDX39A-201ENST00000242776 APOBP04114 4563 aaKnown RBP9.76□□□□□ -0.85
DDX39A-201ENST00000242776 HERC1Q15751 4861 aa9.75□□□□□ -0.85
DDX39A-201ENST00000242776 SERTM2A0A1B0GWG4 89 aa9.75□□□□□ -0.85
DDX39A-201ENST00000242776 GGTLC3B5MD39 225 aa9.75□□□□□ -0.85
DDX39A-201ENST00000242776 F6UZH7 168 aa9.75□□□□□ -0.85
DDX39A-201ENST00000242776 K7EQM0 130 aa9.75□□□□□ -0.85
DDX39A-201ENST00000242776 ZNF705AQ6ZN79 300 aaPredicted RBP9.75□□□□□ -0.85
DDX39A-201ENST00000242776 FOXI2Q6ZQN5 318 aa9.75□□□□□ -0.85
DDX39A-201ENST00000242776 RPUSD4Q96CM3 377 aaKnown RBP9.75□□□□□ -0.85
DDX39A-201ENST00000242776 FAM210BQ96KR6 192 aa9.75□□□□□ -0.85
DDX39A-201ENST00000242776 VAX2Q9UIW0 290 aa9.75□□□□□ -0.85
DDX39A-201ENST00000242776 RPH3ALQ9UNE2 315 aa9.75□□□□□ -0.85
DDX39A-201ENST00000242776 LOC102723971A0A1B0GUV8 181 aa9.74□□□□□ -0.85
DDX39A-201ENST00000242776 TMEM189A5PLL7 270 aa9.74□□□□□ -0.85
DDX39A-201ENST00000242776 RBFOX3A6NFN3 312 aa9.74□□□□□ -0.85
DDX39A-201ENST00000242776 ZNF705FA8MVS1 300 aaPredicted RBP9.74□□□□□ -0.85
DDX39A-201ENST00000242776 M0R3E3 92 aa9.74□□□□□ -0.85
DDX39A-201ENST00000242776 ZNF705DP0CH99 300 aaPredicted RBP9.74□□□□□ -0.85
DDX39A-201ENST00000242776 ZNF705BP0CI00 300 aaPredicted RBP9.74□□□□□ -0.85
DDX39A-201ENST00000242776 ATP5G3P48201 142 aa9.74□□□□□ -0.85
DDX39A-201ENST00000242776 MEF2BQ02080 365 aaPredicted RBP9.74□□□□□ -0.85
DDX39A-201ENST00000242776 SPATA12Q7Z6I5 190 aa9.74□□□□□ -0.85
DDX39A-201ENST00000242776 OR4B1Q8NGF8 309 aa9.74□□□□□ -0.85
DDX39A-201ENST00000242776 OR10J6PQ8NGY7 276 aa9.74□□□□□ -0.85
DDX39A-201ENST00000242776 HIST1H2BAQ96A08 127 aa9.74□□□□□ -0.85
DDX39A-201ENST00000242776 FAM210AQ96ND0 272 aa9.74□□□□□ -0.85
DDX39A-201ENST00000242776 EIF5A2Q9GZV4 153 aaKnown RBP9.74□□□□□ -0.85
DDX39A-201ENST00000242776 DIRC3C9JPN6 131 aa9.73□□□□□ -0.85
DDX39A-201ENST00000242776 PDE6DO43924 150 aa9.73□□□□□ -0.85
DDX39A-201ENST00000242776 DUSP14O95147 198 aaKnown RBP9.73□□□□□ -0.85
DDX39A-201ENST00000242776 HLA-DRB4P13762 266 aa9.73□□□□□ -0.85
DDX39A-201ENST00000242776 TOR2AQ5JU69 321 aa9.73□□□□□ -0.85
DDX39A-201ENST00000242776 ZNF506Q5JVG8 444 aa9.73□□□□□ -0.85
DDX39A-201ENST00000242776 C6orf223Q8N319 242 aa9.73□□□□□ -0.85
DDX39A-201ENST00000242776 NEU1Q99519 415 aa9.73□□□□□ -0.85
DDX39A-201ENST00000242776 SLC35B3Q9H1N7 401 aa9.73□□□□□ -0.85
DDX39A-201ENST00000242776 SAV1Q9H4B6 383 aaPredicted RBP9.73□□□□□ -0.85
DDX39A-201ENST00000242776 EPDR1Q9UM22 224 aa9.73□□□□□ -0.85
DDX39A-201ENST00000242776 HLA-DRB4X5D2U9 266 aa9.73□□□□□ -0.85
DDX39A-201ENST00000242776 RBAKDNA6NC62 111 aa9.72□□□□□ -0.85
DDX39A-201ENST00000242776 PEX7O00628 323 aa9.72□□□□□ -0.85
DDX39A-201ENST00000242776 TCRAP04437 139 aa9.72□□□□□ -0.85
DDX39A-201ENST00000242776 DAD1P61803 113 aa9.72□□□□□ -0.85
DDX39A-201ENST00000242776 GNG5P63218 68 aa9.72□□□□□ -0.85
DDX39A-201ENST00000242776 CCDC28AQ8IWP9 274 aa9.72□□□□□ -0.85
DDX39A-201ENST00000242776 CYB561D1Q8N8Q1 229 aa9.72□□□□□ -0.85
DDX39A-201ENST00000242776 OR8A1Q8NGG7 326 aa9.72□□□□□ -0.85
DDX39A-201ENST00000242776 A0A0J9YX75 114 aa9.72□□□□□ -0.85
DDX39A-201ENST00000242776 NBDYA0A0U1RRE5 68 aa9.72□□□□□ -0.85
DDX39A-201ENST00000242776 SMIM9A6NGZ8 99 aa9.72□□□□□ -0.85
DDX39A-201ENST00000242776 NDUFS6O75380 124 aaKnown RBP9.72□□□□□ -0.85
DDX39A-201ENST00000242776 NUDT3O95989 172 aa9.72□□□□□ -0.85
DDX39A-201ENST00000242776 HIST1H1AQ02539 215 aaPredicted RBP9.72□□□□□ -0.85
DDX39A-201ENST00000242776 TMEM78Q5T7P6 136 aa9.72□□□□□ -0.85
DDX39A-201ENST00000242776 GOLT1AQ6ZVE7 132 aa9.72□□□□□ -0.85
DDX39A-201ENST00000242776 IGKV2-40A0A087WW87 121 aaPredicted RBP9.71□□□□□ -0.86
DDX39A-201ENST00000242776 FBLL1A6NHQ2 334 aaKnown RBP9.71□□□□□ -0.86
DDX39A-201ENST00000242776 IGKV2D-40P01614 121 aaPredicted RBP9.71□□□□□ -0.86
DDX39A-201ENST00000242776 AKR1C3P42330 323 aa9.71□□□□□ -0.86
DDX39A-201ENST00000242776 PEA15Q15121 130 aa9.71□□□□□ -0.86
DDX39A-201ENST00000242776 SMDT1Q9H4I9 107 aa9.71□□□□□ -0.86
DDX39A-201ENST00000242776 PPP1R14DQ9NXH3 145 aa9.71□□□□□ -0.86
DDX39A-201ENST00000242776 TEX48A0A1B0GUV7 120 aa9.7□□□□□ -0.86
DDX39A-201ENST00000242776 SCO2A0A1W2PP80 73 aa9.7□□□□□ -0.86
DDX39A-201ENST00000242776 RAB19A4D1S5 217 aa9.7□□□□□ -0.86
DDX39A-201ENST00000242776 PRAC2D3DTV9 90 aa9.7□□□□□ -0.86
DDX39A-201ENST00000242776 NPIPB6E9PJ23 425 aa9.7□□□□□ -0.86
DDX39A-201ENST00000242776 F6UB75 175 aa9.7□□□□□ -0.86
DDX39A-201ENST00000242776 PRM2P04554 102 aa9.7□□□□□ -0.86
DDX39A-201ENST00000242776 CNN1P51911 297 aaKnown RBP9.7□□□□□ -0.86
DDX39A-201ENST00000242776 UBE2G1P62253 170 aa9.7□□□□□ -0.86
DDX39A-201ENST00000242776 C9orf47Q6ZRZ4 202 aa9.7□□□□□ -0.86
DDX39A-201ENST00000242776 TMEM75Q8N9X5 138 aa9.7□□□□□ -0.86
DDX39A-201ENST00000242776 LINC00477Q96M19 166 aa9.7□□□□□ -0.86
DDX39A-201ENST00000242776 MED9Q9NWA0 146 aa9.7□□□□□ -0.86
DDX39A-201ENST00000242776 GOLT1BQ9Y3E0 138 aa9.7□□□□□ -0.86
DDX39A-201ENST00000242776 S100A9P06702 114 aaKnown RBP9.69□□□□□ -0.86
DDX39A-201ENST00000242776 C1orf158Q8N1D5 194 aa9.69□□□□□ -0.86
DDX39A-201ENST00000242776 C11orf52Q96A22 123 aa9.69□□□□□ -0.86
DDX39A-201ENST00000242776 FMC1Q96HJ9 113 aa9.69□□□□□ -0.86
DDX39A-201ENST00000242776 CLUHP3Q96NS8 147 aa9.69□□□□□ -0.86
DDX39A-201ENST00000242776 DNAH5Q8TE73 4624 aa9.69□□□□□ -0.86
DDX39A-201ENST00000242776 TMEM250H0YL14 139 aa9.68□□□□□ -0.86
DDX39A-201ENST00000242776 RRN3P1Q2M238 152 aa9.68□□□□□ -0.86
DDX39A-201ENST00000242776 C15orf53Q8NAA6 179 aa9.68□□□□□ -0.86
DDX39A-201ENST00000242776 ZNRF2Q8NHG8 242 aa9.68□□□□□ -0.86
DDX39A-201ENST00000242776 ODF3Q96PU9 254 aa9.68□□□□□ -0.86
DDX39A-201ENST00000242776 NDFIP1Q9BT67 221 aa9.68□□□□□ -0.86
DDX39A-201ENST00000242776 TMEM208Q9BTX3 173 aa9.68□□□□□ -0.86
DDX39A-201ENST00000242776 A8MTW9 85 aa9.67□□□□□ -0.86
DDX39A-201ENST00000242776 F5H768 121 aa9.67□□□□□ -0.86
DDX39A-201ENST00000242776 DEFB130BP0DP73 79 aa9.67□□□□□ -0.86
DDX39A-201ENST00000242776 DEFB130AP0DP74 79 aa9.67□□□□□ -0.86
DDX39A-201ENST00000242776 PRB4P10163 310 aaPredicted RBP9.67□□□□□ -0.86
DDX39A-201ENST00000242776 ZNF138P52744 262 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms