RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 SEC11AP67812 179 aa12.01□□□□□ -0.49
CTSD-201ENST00000236671 Q8N9W7 124 aa12.01□□□□□ -0.49
CTSD-201ENST00000236671 IFI27L1Q96BM0 104 aa12.01□□□□□ -0.49
CTSD-201ENST00000236671 NPFFR1Q9GZQ6 430 aa12.01□□□□□ -0.49
CTSD-201ENST00000236671 MSRB1Q9NZV6 116 aa12.01□□□□□ -0.49
CTSD-201ENST00000236671 CDKN1BP46527 198 aa12.01□□□□□ -0.49
CTSD-201ENST00000236671 C7orf71A4D174 169 aa12□□□□□ -0.49
CTSD-201ENST00000236671 PRAC2D3DTV9 90 aa12□□□□□ -0.49
CTSD-201ENST00000236671 ORM1P02763 201 aa12□□□□□ -0.49
CTSD-201ENST00000236671 COX6B1P14854 86 aa12□□□□□ -0.49
CTSD-201ENST00000236671 ZFP36P26651 326 aaKnown RBP12□□□□□ -0.49
CTSD-201ENST00000236671 ERCC8Q13216 396 aa12□□□□□ -0.49
CTSD-201ENST00000236671 ZFAND3Q9H8U3 227 aa12□□□□□ -0.49
CTSD-201ENST00000236671 PEF1Q9UBV8 284 aaKnown RBP12□□□□□ -0.49
CTSD-201ENST00000236671 OTOGQ6ZRI0 2925 aa11.99□□□□□ -0.49
CTSD-201ENST00000236671 LINC01546A6NGU7 62 aa11.99□□□□□ -0.49
CTSD-201ENST00000236671 SMAD7O15105 426 aaKnown RBP11.99□□□□□ -0.49
CTSD-201ENST00000236671 NDUFS7O75251 213 aa11.99□□□□□ -0.49
CTSD-201ENST00000236671 PRSS57Q6UWY2 283 aa11.99□□□□□ -0.49
CTSD-201ENST00000236671 ZNF502Q8TBZ5 544 aa11.99□□□□□ -0.49
CTSD-201ENST00000236671 FABP5P3A8MUU1 101 aa11.99□□□□□ -0.49
CTSD-201ENST00000236671 GAS8-AS1O95177 125 aa11.99□□□□□ -0.49
CTSD-201ENST00000236671 C15orf32Q32M92 178 aa11.99□□□□□ -0.49
CTSD-201ENST00000236671 LINC01559Q495D7 138 aa11.99□□□□□ -0.49
CTSD-201ENST00000236671 FAM110DQ8TAY7 271 aaPredicted RBP11.99□□□□□ -0.49
CTSD-201ENST00000236671 BUB3O43684 328 aa11.98□□□□□ -0.49
CTSD-201ENST00000236671 S100A7P31151 101 aa11.98□□□□□ -0.49
CTSD-201ENST00000236671 TCTAP57738 103 aa11.98□□□□□ -0.49
CTSD-201ENST00000236671 SPOCK3Q9BQ16 436 aa11.98□□□□□ -0.49
CTSD-201ENST00000236671 SIRPDQ9H106 197 aa11.98□□□□□ -0.49
CTSD-201ENST00000236671 MAP1LC3AQ9H492 121 aa11.98□□□□□ -0.49
CTSD-201ENST00000236671 ZFHX3Q15911 3703 aa11.98□□□□□ -0.49
CTSD-201ENST00000236671 PPBPP02775 128 aa11.98□□□□□ -0.49
CTSD-201ENST00000236671 KLK9Q2XQG4 91 aa11.98□□□□□ -0.49
CTSD-201ENST00000236671 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.98□□□□□ -0.49
CTSD-201ENST00000236671 RNF182Q8N6D2 247 aa11.98□□□□□ -0.49
CTSD-201ENST00000236671 OR9G4Q8NGQ1 327 aa11.98□□□□□ -0.49
CTSD-201ENST00000236671 CST9LQ9H4G1 147 aa11.98□□□□□ -0.49
CTSD-201ENST00000236671 KLK9Q9UKQ9 250 aa11.98□□□□□ -0.49
CTSD-201ENST00000236671 IL17RELQ6ZVW7 336 aa11.97□□□□□ -0.49
CTSD-201ENST00000236671 WFDC3Q8IUB2 231 aa11.97□□□□□ -0.49
CTSD-201ENST00000236671 DKK2Q9UBU2 259 aa11.97□□□□□ -0.49
CTSD-201ENST00000236671 MYO9AB2RTY4 2548 aa11.97□□□□□ -0.49
CTSD-201ENST00000236671 CLPSL1A2RUU4 121 aa11.96□□□□□ -0.49
CTSD-201ENST00000236671 RBAKDNA6NC62 111 aa11.96□□□□□ -0.49
CTSD-201ENST00000236671 HSD52Q0P140 79 aa11.96□□□□□ -0.49
CTSD-201ENST00000236671 ECSCRQ19T08 205 aa11.96□□□□□ -0.49
CTSD-201ENST00000236671 AJUBAQ96IF1 538 aa11.96□□□□□ -0.49
CTSD-201ENST00000236671 SIVA1O15304 175 aa11.96□□□□□ -0.5
CTSD-201ENST00000236671 ATP6V0E1O15342 81 aa11.96□□□□□ -0.5
CTSD-201ENST00000236671 CLEC3BP05452 202 aa11.96□□□□□ -0.5
CTSD-201ENST00000236671 RAB9AP51151 201 aa11.96□□□□□ -0.5
CTSD-201ENST00000236671 ADAMTSL5Q6ZMM2 481 aa11.96□□□□□ -0.5
CTSD-201ENST00000236671 PCP2Q8IVA1 136 aa11.96□□□□□ -0.5
CTSD-201ENST00000236671 TNFRSF6BO95407 300 aa11.95□□□□□ -0.5
CTSD-201ENST00000236671 CCDC140Q96MF4 163 aa11.95□□□□□ -0.5
CTSD-201ENST00000236671 C18orf15Q96N68 181 aa11.95□□□□□ -0.5
CTSD-201ENST00000236671 IGKV3D-20A0A0C4DH25 116 aa11.95□□□□□ -0.5
CTSD-201ENST00000236671 IGHV3-66A0A0C4DH42 116 aa11.95□□□□□ -0.5
CTSD-201ENST00000236671 CYSRT1A8MQ03 144 aa11.95□□□□□ -0.5
CTSD-201ENST00000236671 PPIFP30405 207 aaKnown RBP11.95□□□□□ -0.5
CTSD-201ENST00000236671 LEPP41159 167 aa11.95□□□□□ -0.5
CTSD-201ENST00000236671 OCIAD2Q56VL3 154 aa11.95□□□□□ -0.5
CTSD-201ENST00000236671 DTX2Q86UW9 622 aa11.95□□□□□ -0.5
CTSD-201ENST00000236671 SLC50A1Q9BRV3 221 aa11.95□□□□□ -0.5
CTSD-201ENST00000236671 UBTD1Q9HAC8 227 aa11.95□□□□□ -0.5
CTSD-201ENST00000236671 MAST4O15021 2626 aa11.94□□□□□ -0.5
CTSD-201ENST00000236671 H3BRM9 83 aa11.94□□□□□ -0.5
CTSD-201ENST00000236671 EVI2AP22794 236 aa11.94□□□□□ -0.5
CTSD-201ENST00000236671 FCER1GP30273 86 aa11.94□□□□□ -0.5
CTSD-201ENST00000236671 NMUP48645 174 aa11.94□□□□□ -0.5
CTSD-201ENST00000236671 OR4X2Q8NGF9 303 aa11.94□□□□□ -0.5
CTSD-201ENST00000236671 NXT2Q9NPJ8 142 aaKnown RBP11.94□□□□□ -0.5
CTSD-201ENST00000236671 C11orf21Q9P2W6 132 aa11.94□□□□□ -0.5
CTSD-201ENST00000236671 GAGE12BA1L429 117 aa11.93□□□□□ -0.5
CTSD-201ENST00000236671 A6NDN8 102 aa11.93□□□□□ -0.5
CTSD-201ENST00000236671 GATA1P15976 413 aaPredicted RBP11.93□□□□□ -0.5
CTSD-201ENST00000236671 ODF1Q14990 250 aa11.93□□□□□ -0.5
CTSD-201ENST00000236671 RNF151Q2KHN1 245 aa11.93□□□□□ -0.5
CTSD-201ENST00000236671 PIFOQ8TCI5 191 aa11.93□□□□□ -0.5
CTSD-201ENST00000236671 JMJD8Q96S16 334 aa11.93□□□□□ -0.5
CTSD-201ENST00000236671 ITPR3Q14573 2671 aa11.93□□□□□ -0.5
CTSD-201ENST00000236671 TRAV8-2A0A0B4J237 113 aa11.93□□□□□ -0.5
CTSD-201ENST00000236671 C9orf118A6NHY6 69 aa11.93□□□□□ -0.5
CTSD-201ENST00000236671 GOSR1O95249 250 aa11.93□□□□□ -0.5
CTSD-201ENST00000236671 UFSP1Q6NVU6 142 aa11.93□□□□□ -0.5
CTSD-201ENST00000236671 AGPAT4-IT1Q9H0P7 198 aa11.93□□□□□ -0.5
CTSD-201ENST00000236671 ZMAT4Q9H898 229 aa11.93□□□□□ -0.5
CTSD-201ENST00000236671 UBE2E1P51965 193 aa11.92□□□□□ -0.5
CTSD-201ENST00000236671 KIR3DS1Q14943 382 aa11.92□□□□□ -0.5
CTSD-201ENST00000236671 CLEC19AQ6UXS0 136 aa11.92□□□□□ -0.5
CTSD-201ENST00000236671 WNK2Q9Y3S1 2297 aa11.92□□□□□ -0.5
CTSD-201ENST00000236671 IGHV3OR16-13A0A075B7E8 117 aa11.92□□□□□ -0.5
CTSD-201ENST00000236671 IGHV3-74A0A0B4J1X5 117 aa11.92□□□□□ -0.5
CTSD-201ENST00000236671 G3V318 75 aa11.92□□□□□ -0.5
CTSD-201ENST00000236671 HHLA3Q9XRX5 114 aa11.92□□□□□ -0.5
CTSD-201ENST00000236671 IGLV2-18A0A075B6J9 118 aa11.91□□□□□ -0.5
CTSD-201ENST00000236671 LINC01548A6NM66 108 aa11.91□□□□□ -0.5
CTSD-201ENST00000236671 TRGV3P03979 118 aa11.91□□□□□ -0.5
CTSD-201ENST00000236671 SAA4P35542 130 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms