RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 TEN1Q86WV5 123 aa6.57□□□□□ -1.36
SPARC-201ENST00000231061 TNRC6BQ9UPQ9 1833 aaKnown RBP6.57□□□□□ -1.36
SPARC-201ENST00000231061 IGHV3-13P01766 116 aa6.57□□□□□ -1.36
SPARC-201ENST00000231061 PYYP10082 97 aa6.57□□□□□ -1.36
SPARC-201ENST00000231061 IGHV1-2P23083 117 aa6.57□□□□□ -1.36
SPARC-201ENST00000231061 ASIPP42127 132 aa6.57□□□□□ -1.36
SPARC-201ENST00000231061 KLF14Q8TD94 323 aaPredicted RBP6.57□□□□□ -1.36
SPARC-201ENST00000231061 CYSTM1Q9H1C7 97 aa6.57□□□□□ -1.36
SPARC-201ENST00000231061 SMCPP49901 116 aaPredicted RBP6.56□□□□□ -1.36
SPARC-201ENST00000231061 NSUN5P1Q3KNT7 163 aa6.56□□□□□ -1.36
SPARC-201ENST00000231061 CYP2G1PQ6ZSU1 146 aa6.56□□□□□ -1.36
SPARC-201ENST00000231061 LRRC29Q8WV35 223 aa6.56□□□□□ -1.36
SPARC-201ENST00000231061 DCTN5Q9BTE1 182 aa6.56□□□□□ -1.36
SPARC-201ENST00000231061 AP5S1Q9NUS5 200 aa6.56□□□□□ -1.36
SPARC-201ENST00000231061 HAX1O00165 279 aa6.56□□□□□ -1.36
SPARC-201ENST00000231061 SPINK4O60575 86 aa6.56□□□□□ -1.36
SPARC-201ENST00000231061 SUB1P53999 127 aaKnown RBP eCLIP6.56□□□□□ -1.36
SPARC-201ENST00000231061 SFTA2Q6UW10 78 aa6.56□□□□□ -1.36
SPARC-201ENST00000231061 TIMM9Q9Y5J7 89 aa6.56□□□□□ -1.36
SPARC-201ENST00000231061 IGLL5B9A064 214 aa6.56□□□□□ -1.36
SPARC-201ENST00000231061 CRXO43186 299 aaPredicted RBP6.56□□□□□ -1.36
SPARC-201ENST00000231061 EDDM3BP56851 147 aa6.56□□□□□ -1.36
SPARC-201ENST00000231061 TCF15Q12870 199 aa6.56□□□□□ -1.36
SPARC-201ENST00000231061 RUSC1-AS1Q66K80 236 aa6.56□□□□□ -1.36
SPARC-201ENST00000231061 NPCDR1Q9BY65 106 aa6.56□□□□□ -1.36
SPARC-201ENST00000231061 IQCF6A8MYZ5 107 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 E9PLD3 99 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 FXYD2P54710 66 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 RRN3P1Q2M238 152 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 TRAV41A0A0B4J266 112 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 C11orf94C9JXX5 98 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 HLA-DRB4P13762 266 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 CACNG7P62955 275 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 ECSCRQ19T08 205 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 PRO3102Q9H379 93 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 NXT2Q9NPJ8 142 aaKnown RBP6.55□□□□□ -1.36
SPARC-201ENST00000231061 HLA-DRB4X5D2U9 266 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 C8orf87E5RJ46 101 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 MYCNOSP40205 109 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 SNRPD3P62318 126 aaKnown RBP6.55□□□□□ -1.36
SPARC-201ENST00000231061 PAX8Q06710 450 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 CENPWQ5EE01 88 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 CFAP126Q5VTH2 177 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 AMN1Q8IY45 258 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 BCL6BQ8N143 479 aaPredicted RBP6.55□□□□□ -1.36
SPARC-201ENST00000231061 OR9G1Q8NH87 305 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 SHANK2-AS3Q9BTD1 123 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 ARHGAP21Q5T5U3 1957 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 USF3Q68DE3 2245 aa6.55□□□□□ -1.36
SPARC-201ENST00000231061 LINC00473A8K010 186 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 INS-IGF2F8WCM5 200 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 EGR2P11161 476 aaPredicted RBP6.54□□□□□ -1.36
SPARC-201ENST00000231061 COX7CP15954 63 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 TMEM155Q4W5P6 130 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 Q6ZR03 302 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 IGF2RP11717 2491 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 ZNF318Q5VUA4 2279 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 GP9P14770 177 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 ZNF56Q15929 161 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 PQLC2Q6ZP29 291 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 ZNF883P0CG24 379 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 PSMB2P49721 201 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 FRYQ5TBA9 3013 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 KMT2EQ8IZD2 1858 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 PRR14LQ5THK1 2151 aa6.54□□□□□ -1.36
SPARC-201ENST00000231061 PRB4P10163 310 aaPredicted RBP6.53□□□□□ -1.36
SPARC-201ENST00000231061 CRYGAP11844 174 aa6.53□□□□□ -1.36
SPARC-201ENST00000231061 CD59P13987 128 aa6.53□□□□□ -1.36
SPARC-201ENST00000231061 PRRC2CQ9Y520 2896 aaKnown RBP6.53□□□□□ -1.36
SPARC-201ENST00000231061 IGHV3OR15-7A0A075B7D8 119 aa6.53□□□□□ -1.36
SPARC-201ENST00000231061 IGKCP01834 107 aa6.53□□□□□ -1.36
SPARC-201ENST00000231061 EPDR1Q9UM22 224 aa6.53□□□□□ -1.36
SPARC-201ENST00000231061 C2orf70A6NJV1 201 aa6.53□□□□□ -1.36
SPARC-201ENST00000231061 FRMD6-AS1P0C7T7 363 aa6.53□□□□□ -1.36
SPARC-201ENST00000231061 BRWD1-AS2P59051 145 aa6.53□□□□□ -1.36
SPARC-201ENST00000231061 C11orf53Q8IXP5 236 aa6.53□□□□□ -1.36
SPARC-201ENST00000231061 DCANP1Q8TF63 244 aa6.53□□□□□ -1.36
SPARC-201ENST00000231061 PMS2P5A8MQ11 134 aa6.52□□□□□ -1.37
SPARC-201ENST00000231061 K7EM74 188 aa6.52□□□□□ -1.37
SPARC-201ENST00000231061 PRRG2O14669 202 aa6.52□□□□□ -1.37
SPARC-201ENST00000231061 ORMDL2Q53FV1 153 aa6.52□□□□□ -1.37
SPARC-201ENST00000231061 LINC00305Q7Z4B0 112 aa6.52□□□□□ -1.37
SPARC-201ENST00000231061 MDFIQ99750 246 aa6.52□□□□□ -1.37
SPARC-201ENST00000231061 TECTAO75443 2155 aa6.52□□□□□ -1.37
SPARC-201ENST00000231061 C15orf62A8K5M9 175 aa6.52□□□□□ -1.37
SPARC-201ENST00000231061 WISP2O76076 250 aa6.52□□□□□ -1.37
SPARC-201ENST00000231061 P0C879 139 aa6.52□□□□□ -1.37
SPARC-201ENST00000231061 RPL39P5Q59GN2 51 aa6.52□□□□□ -1.37
SPARC-201ENST00000231061 MIC13Q5XKP0 118 aa6.52□□□□□ -1.37
SPARC-201ENST00000231061 DPH3P1Q9H4G8 78 aa6.52□□□□□ -1.37
SPARC-201ENST00000231061 RBM3P98179 157 aaKnown RBP6.51□□□□□ -1.37
SPARC-201ENST00000231061 TEPPQ6URK8 271 aa6.51□□□□□ -1.37
SPARC-201ENST00000231061 CD177Q8N6Q3 437 aa6.51□□□□□ -1.37
SPARC-201ENST00000231061 C9orf106Q8NAJ2 232 aa6.51□□□□□ -1.37
SPARC-201ENST00000231061 LEAP2Q969E1 77 aa6.51□□□□□ -1.37
SPARC-201ENST00000231061 TRAV8-4A0A0B4J246 113 aa6.51□□□□□ -1.37
SPARC-201ENST00000231061 LOC107984156A0A0G2JMH3 177 aa6.51□□□□□ -1.37
SPARC-201ENST00000231061 NPC2P61916 151 aa6.51□□□□□ -1.37
SPARC-201ENST00000231061 GNB1P62873 340 aa6.51□□□□□ -1.37
SPARC-201ENST00000231061 EIF4EBP1Q13541 118 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms