RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 MIEN1Q9BRT3 115 aa11.23□□□□□ -0.61
PTK7-201ENST00000230418 FBLL1A6NHQ2 334 aaKnown RBP11.22□□□□□ -0.61
PTK7-201ENST00000230418 DSCR9P59020 149 aa11.22□□□□□ -0.61
PTK7-201ENST00000230418 DEFB136Q30KP8 78 aa11.22□□□□□ -0.61
PTK7-201ENST00000230418 HIST2H2BDQ6DRA6 164 aa11.22□□□□□ -0.61
PTK7-201ENST00000230418 TMEM8BA6NDV4 472 aa11.22□□□□□ -0.61
PTK7-201ENST00000230418 C1orf194Q5T5A4 169 aa11.22□□□□□ -0.61
PTK7-201ENST00000230418 AGPAT4-IT1Q9H0P7 198 aa11.22□□□□□ -0.61
PTK7-201ENST00000230418 TRAV26-2A0A0B4J265 109 aa11.22□□□□□ -0.61
PTK7-201ENST00000230418 FAM223BA6NKX1 122 aa11.22□□□□□ -0.61
PTK7-201ENST00000230418 EREGO14944 169 aa11.22□□□□□ -0.61
PTK7-201ENST00000230418 GCSHP23434 173 aa11.22□□□□□ -0.61
PTK7-201ENST00000230418 PLP1P60201 277 aa11.22□□□□□ -0.61
PTK7-201ENST00000230418 FOXE3Q13461 319 aa11.22□□□□□ -0.61
PTK7-201ENST00000230418 PRSS57Q6UWY2 283 aa11.22□□□□□ -0.61
PTK7-201ENST00000230418 Q71RC1 249 aaPredicted RBP11.22□□□□□ -0.61
PTK7-201ENST00000230418 FAM223AQ8IWN6 122 aa11.22□□□□□ -0.61
PTK7-201ENST00000230418 DAZ1Q9NQZ3 744 aaKnown RBP11.22□□□□□ -0.61
PTK7-201ENST00000230418 DSCAML1Q8TD84 2053 aa11.21□□□□□ -0.61
PTK7-201ENST00000230418 FLNBO75369 2602 aaKnown RBP11.21□□□□□ -0.61
PTK7-201ENST00000230418 TRAV21A0A0B4J279 112 aa11.21□□□□□ -0.61
PTK7-201ENST00000230418 UNQ9165/PRO28630Q6UXU0 137 aa11.21□□□□□ -0.61
PTK7-201ENST00000230418 C9orf139Q6ZV77 190 aa11.21□□□□□ -0.61
PTK7-201ENST00000230418 RASL11AQ6T310 242 aa11.21□□□□□ -0.62
PTK7-201ENST00000230418 USMG5Q96IX5 58 aa11.21□□□□□ -0.62
PTK7-201ENST00000230418 COL27A1Q8IZC6 1860 aaPredicted RBP11.21□□□□□ -0.62
PTK7-201ENST00000230418 ZFHX4Q86UP3 3567 aa11.21□□□□□ -0.62
PTK7-201ENST00000230418 HOXA3O43365 443 aaPredicted RBP11.2□□□□□ -0.62
PTK7-201ENST00000230418 TRAV12-2A0A075B6T6 113 aa11.2□□□□□ -0.62
PTK7-201ENST00000230418 BUB3O43684 328 aa11.2□□□□□ -0.62
PTK7-201ENST00000230418 LINC00173Q6ZV60 143 aa11.2□□□□□ -0.62
PTK7-201ENST00000230418 HECTD1Q9ULT8 2610 aa11.2□□□□□ -0.62
PTK7-201ENST00000230418 IGLC2P0DOY2 106 aa11.2□□□□□ -0.62
PTK7-201ENST00000230418 TRAV9-2A0A087WT02 112 aa11.19□□□□□ -0.62
PTK7-201ENST00000230418 PAX1P15863 534 aa11.19□□□□□ -0.62
PTK7-201ENST00000230418 SRSF9Q13242 221 aaKnown RBP eCLIP11.19□□□□□ -0.62
PTK7-201ENST00000230418 IGHV3-73A0A0B4J1V6 119 aa11.19□□□□□ -0.62
PTK7-201ENST00000230418 A0A1B0GW15 77 aa11.19□□□□□ -0.62
PTK7-201ENST00000230418 COA6Q5JTJ3 125 aaKnown RBP11.19□□□□□ -0.62
PTK7-201ENST00000230418 WIPF2Q8TF74 440 aaPredicted RBP11.19□□□□□ -0.62
PTK7-201ENST00000230418 WI2-2373I1.2A0A1W2PRP0 233 aa11.19□□□□□ -0.62
PTK7-201ENST00000230418 GATA1P15976 413 aaPredicted RBP11.19□□□□□ -0.62
PTK7-201ENST00000230418 GDF5OSQ5U4N7 250 aa11.19□□□□□ -0.62
PTK7-201ENST00000230418 A0A087WWL8 130 aa11.18□□□□□ -0.62
PTK7-201ENST00000230418 ZMAT5Q9UDW3 170 aaKnown RBP11.18□□□□□ -0.62
PTK7-201ENST00000230418 HBDP02042 147 aa11.18□□□□□ -0.62
PTK7-201ENST00000230418 MRPL51Q4U2R6 128 aaKnown RBP11.18□□□□□ -0.62
PTK7-201ENST00000230418 CCDC140Q96MF4 163 aa11.18□□□□□ -0.62
PTK7-201ENST00000230418 LAMTOR2Q9Y2Q5 125 aa11.18□□□□□ -0.62
PTK7-201ENST00000230418 SYS1-DBNDD2H3BUS1 97 aa11.18□□□□□ -0.62
PTK7-201ENST00000230418 CT83Q5H943 113 aa11.18□□□□□ -0.62
PTK7-201ENST00000230418 KLHL30-AS1Q8NEE0 82 aa11.18□□□□□ -0.62
PTK7-201ENST00000230418 IFI27L1Q96BM0 104 aa11.18□□□□□ -0.62
PTK7-201ENST00000230418 SMIM12Q96EX1 92 aa11.18□□□□□ -0.62
PTK7-201ENST00000230418 AJUBAQ96IF1 538 aa11.18□□□□□ -0.62
PTK7-201ENST00000230418 OVOL1O14753 267 aa11.17□□□□□ -0.62
PTK7-201ENST00000230418 SPINK13Q1W4C9 94 aa11.17□□□□□ -0.62
PTK7-201ENST00000230418 Q6ZS46 218 aa11.17□□□□□ -0.62
PTK7-201ENST00000230418 CHCHD1Q96BP2 118 aaKnown RBP11.17□□□□□ -0.62
PTK7-201ENST00000230418 GFRA4Q9GZZ7 299 aa11.17□□□□□ -0.62
PTK7-201ENST00000230418 IGHV1-24A0A0C4DH33 117 aa11.17□□□□□ -0.62
PTK7-201ENST00000230418 TSPOP30536 169 aa11.17□□□□□ -0.62
PTK7-201ENST00000230418 C10orf99Q6UWK7 81 aa11.17□□□□□ -0.62
PTK7-201ENST00000230418 SYT8Q8NBV8 401 aa11.17□□□□□ -0.62
PTK7-201ENST00000230418 KLF12Q9Y4X4 402 aa11.17□□□□□ -0.62
PTK7-201ENST00000230418 EMP1P54849 157 aa11.17□□□□□ -0.62
PTK7-201ENST00000230418 FAM104BQ5XKR9 115 aa11.17□□□□□ -0.62
PTK7-201ENST00000230418 RAX2Q96IS3 184 aa11.17□□□□□ -0.62
PTK7-201ENST00000230418 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
PTK7-201ENST00000230418 VPS25Q9BRG1 176 aa11.17□□□□□ -0.62
PTK7-201ENST00000230418 NPYP01303 97 aa11.16□□□□□ -0.62
PTK7-201ENST00000230418 LINC00477Q96M19 166 aa11.16□□□□□ -0.62
PTK7-201ENST00000230418 KIR2DL4Q99706 377 aa11.16□□□□□ -0.62
PTK7-201ENST00000230418 Q1RN00 199 aa11.16□□□□□ -0.62
PTK7-201ENST00000230418 KLK9Q9UKQ9 250 aa11.16□□□□□ -0.62
PTK7-201ENST00000230418 FLNCQ14315 2725 aa11.16□□□□□ -0.62
PTK7-201ENST00000230418 STPG4Q8N801 248 aa11.16□□□□□ -0.62
PTK7-201ENST00000230418 LINC01587Q99440 93 aa11.16□□□□□ -0.62
PTK7-201ENST00000230418 MRGPRG-AS1Q2M3A8 158 aa11.15□□□□□ -0.62
PTK7-201ENST00000230418 IGKV3OR2-268A0A0C4DH90 116 aa11.15□□□□□ -0.62
PTK7-201ENST00000230418 ZNF80P51504 273 aaPredicted RBP11.15□□□□□ -0.62
PTK7-201ENST00000230418 NDUFA4O00483 81 aa11.15□□□□□ -0.63
PTK7-201ENST00000230418 RELNP78509 3460 aa11.14□□□□□ -0.63
PTK7-201ENST00000230418 DEFB131AP59861 70 aa11.14□□□□□ -0.63
PTK7-201ENST00000230418 NSUN5P1Q3KNT7 163 aa11.14□□□□□ -0.63
PTK7-201ENST00000230418 ANXA2RQ3ZCQ2 193 aa11.14□□□□□ -0.63
PTK7-201ENST00000230418 TMEM170BQ5T4T1 132 aa11.14□□□□□ -0.63
PTK7-201ENST00000230418 NEGR1Q7Z3B1 354 aa11.14□□□□□ -0.63
PTK7-201ENST00000230418 ARL6IP6Q8N6S5 226 aa11.14□□□□□ -0.63
PTK7-201ENST00000230418 OR1N2Q8NGR9 330 aa11.14□□□□□ -0.63
PTK7-201ENST00000230418 SNHG12Q9BXW3 62 aa11.14□□□□□ -0.63
PTK7-201ENST00000230418 TMEM158Q8WZ71 300 aa11.14□□□□□ -0.63
PTK7-201ENST00000230418 NAA38Q9BRA0 125 aaKnown RBP11.14□□□□□ -0.63
PTK7-201ENST00000230418 TNFRSF6BO95407 300 aa11.14□□□□□ -0.63
PTK7-201ENST00000230418 SIGLEC8Q9NYZ4 499 aa11.14□□□□□ -0.63
PTK7-201ENST00000230418 FAM231BA6NCW3 169 aa11.13□□□□□ -0.63
PTK7-201ENST00000230418 GNRH2O43555 120 aa11.13□□□□□ -0.63
PTK7-201ENST00000230418 AVPP01185 164 aa11.13□□□□□ -0.63
PTK7-201ENST00000230418 SCGB1C2P0DMR2 95 aa11.13□□□□□ -0.63
PTK7-201ENST00000230418 GATA3P23771 443 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms