RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 ATP5L2Q7Z4Y8 100 aa12.58□□□□□ -0.4
TVP23C-201ENST00000225576 FAM19A4Q96LR4 140 aa12.58□□□□□ -0.4
TVP23C-201ENST00000225576 GNB1LQ9BYB4 327 aa12.58□□□□□ -0.4
TVP23C-201ENST00000225576 TRAPPC1Q9Y5R8 145 aa12.58□□□□□ -0.4
TVP23C-201ENST00000225576 F6UB75 175 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 SPINK4O60575 86 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 HIST1H2BKO60814 126 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 HIST1H2BJP06899 126 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 TRGC1P0CF51 173 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 HIST1H2BOP23527 126 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 HIST1H2BBP33778 126 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 HIST1H2BDP58876 126 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 DEFB1P60022 68 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 RPS20P60866 119 aaKnown RBP12.57□□□□□ -0.4
TVP23C-201ENST00000225576 HIST1H2BCP62807 126 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 HIST2H2BEQ16778 126 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 PSMG4Q5JS54 123 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.57□□□□□ -0.4
TVP23C-201ENST00000225576 WDR73Q6P4I2 378 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 HIST1H2BHQ93079 126 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 HIST1H2BNQ99877 126 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 HIST1H2BMQ99879 126 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 DNHD1Q96M86 4753 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 TRAV25A0A0B4J276 109 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 MT-ND6P03923 174 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 FABP9Q0Z7S8 132 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 Q6AWC8 147 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 MRPL54Q6P161 138 aaKnown RBP12.57□□□□□ -0.4
TVP23C-201ENST00000225576 TMEM61Q8N0U2 210 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 ZFAND2AQ8N6M9 145 aa12.57□□□□□ -0.4
TVP23C-201ENST00000225576 S100A6P06703 90 aa12.56□□□□□ -0.4
TVP23C-201ENST00000225576 FRMD6-AS1P0C7T7 363 aa12.56□□□□□ -0.4
TVP23C-201ENST00000225576 GZMBP10144 247 aa12.56□□□□□ -0.4
TVP23C-201ENST00000225576 CRISP2P16562 243 aa12.56□□□□□ -0.4
TVP23C-201ENST00000225576 NSUN5P1Q3KNT7 163 aa12.56□□□□□ -0.4
TVP23C-201ENST00000225576 LINC01559Q495D7 138 aa12.56□□□□□ -0.4
TVP23C-201ENST00000225576 APRG1Q8IVJ8 170 aa12.56□□□□□ -0.4
TVP23C-201ENST00000225576 A0A0J9YX75 114 aa12.55□□□□□ -0.4
TVP23C-201ENST00000225576 A0A1B0GXF2 115 aa12.55□□□□□ -0.4
TVP23C-201ENST00000225576 SNURFLB1AK76 121 aa12.55□□□□□ -0.4
TVP23C-201ENST00000225576 TMEM136Q6ZRR5 245 aa12.55□□□□□ -0.4
TVP23C-201ENST00000225576 PGLYRP4Q96LB8 373 aa12.55□□□□□ -0.4
TVP23C-201ENST00000225576 CD300EQ496F6 205 aaPredicted RBP12.54□□□□□ -0.4
TVP23C-201ENST00000225576 EBLN2Q6P2I7 272 aa12.54□□□□□ -0.4
TVP23C-201ENST00000225576 ODF3Q96PU9 254 aa12.54□□□□□ -0.4
TVP23C-201ENST00000225576 SPAG8Q99932 426 aaPredicted RBP12.54□□□□□ -0.4
TVP23C-201ENST00000225576 NSD1Q96L73 2696 aaPredicted RBP12.54□□□□□ -0.4
TVP23C-201ENST00000225576 C5orf52A6NGY3 159 aa12.53□□□□□ -0.4
TVP23C-201ENST00000225576 DUSP14O95147 198 aaKnown RBP12.53□□□□□ -0.4
TVP23C-201ENST00000225576 HLA-DQA1P01909 254 aa12.53□□□□□ -0.4
TVP23C-201ENST00000225576 ORM1P02763 201 aa12.53□□□□□ -0.4
TVP23C-201ENST00000225576 KRTAP21-3Q3LHN1 58 aa12.53□□□□□ -0.4
TVP23C-201ENST00000225576 FOXI2Q6ZQN5 318 aa12.53□□□□□ -0.4
TVP23C-201ENST00000225576 ZNF575Q86XF7 245 aa12.53□□□□□ -0.4
TVP23C-201ENST00000225576 MRPL18Q9H0U6 180 aaKnown RBP12.53□□□□□ -0.4
TVP23C-201ENST00000225576 TMSB15BA0A087X1C1 80 aa12.52□□□□□ -0.4
TVP23C-201ENST00000225576 OR4C46A6NHA9 309 aa12.52□□□□□ -0.4
TVP23C-201ENST00000225576 HBBP68871 147 aa12.52□□□□□ -0.4
TVP23C-201ENST00000225576 PRR9Q5T870 116 aa12.52□□□□□ -0.4
TVP23C-201ENST00000225576 GDF5OSQ5U4N7 250 aa12.52□□□□□ -0.4
TVP23C-201ENST00000225576 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.52□□□□□ -0.4
TVP23C-201ENST00000225576 TRAV21A0A0B4J279 112 aa12.52□□□□□ -0.41
TVP23C-201ENST00000225576 A0A1B0GUT8 65 aa12.52□□□□□ -0.41
TVP23C-201ENST00000225576 GPX1P07203 203 aa12.52□□□□□ -0.41
TVP23C-201ENST00000225576 RAB4BP61018 213 aa12.52□□□□□ -0.41
TVP23C-201ENST00000225576 SNRPEP62304 92 aaKnown RBP12.52□□□□□ -0.41
TVP23C-201ENST00000225576 CUBNO60494 3623 aa12.51□□□□□ -0.41
TVP23C-201ENST00000225576 IGKV3D-20A0A0C4DH25 116 aa12.51□□□□□ -0.41
TVP23C-201ENST00000225576 KLLNB2CW77 178 aa12.51□□□□□ -0.41
TVP23C-201ENST00000225576 IGLC6P0CF74 106 aa12.51□□□□□ -0.41
TVP23C-201ENST00000225576 CD33P20138 364 aa12.51□□□□□ -0.41
TVP23C-201ENST00000225576 NDUFA6P56556 154 aa12.51□□□□□ -0.41
TVP23C-201ENST00000225576 RIGQ13278 110 aa12.51□□□□□ -0.41
TVP23C-201ENST00000225576 C11orf21Q9P2W6 132 aa12.51□□□□□ -0.41
TVP23C-201ENST00000225576 ZNF256Q9Y2P7 627 aaPredicted RBP12.51□□□□□ -0.41
TVP23C-201ENST00000225576 A0A1B0GW15 77 aa12.5□□□□□ -0.41
TVP23C-201ENST00000225576 LEPP41159 167 aa12.5□□□□□ -0.41
TVP23C-201ENST00000225576 DEFB131AP59861 70 aa12.5□□□□□ -0.41
TVP23C-201ENST00000225576 FER1L6-AS1Q8NA97 138 aa12.5□□□□□ -0.41
TVP23C-201ENST00000225576 BORCS7Q96B45 105 aa12.5□□□□□ -0.41
TVP23C-201ENST00000225576 S100A8P05109 93 aa12.49□□□□□ -0.41
TVP23C-201ENST00000225576 RNASE4P34096 147 aaKnown RBP12.49□□□□□ -0.41
TVP23C-201ENST00000225576 CTRLP40313 264 aa12.49□□□□□ -0.41
TVP23C-201ENST00000225576 CAMPP49913 170 aa12.49□□□□□ -0.41
TVP23C-201ENST00000225576 LYZL1Q6UWQ5 148 aa12.49□□□□□ -0.41
TVP23C-201ENST00000225576 A8MTW9 85 aa12.48□□□□□ -0.41
TVP23C-201ENST00000225576 SAP30O75446 220 aa12.48□□□□□ -0.41
TVP23C-201ENST00000225576 APCSP02743 223 aa12.48□□□□□ -0.41
TVP23C-201ENST00000225576 ARMS2P0C7Q2 107 aa12.48□□□□□ -0.41
TVP23C-201ENST00000225576 TSPOP30536 169 aa12.48□□□□□ -0.41
TVP23C-201ENST00000225576 OR2K2Q8NGT1 345 aa12.48□□□□□ -0.41
TVP23C-201ENST00000225576 MAP6D1Q9H9H5 199 aa12.48□□□□□ -0.41
TVP23C-201ENST00000225576 F2Z2F3 143 aa12.47□□□□□ -0.41
TVP23C-201ENST00000225576 J3KRW8 73 aa12.47□□□□□ -0.41
TVP23C-201ENST00000225576 UBE2CO00762 179 aa12.47□□□□□ -0.41
TVP23C-201ENST00000225576 PF4P02776 101 aa12.47□□□□□ -0.41
TVP23C-201ENST00000225576 HLA-DRB4P13762 266 aa12.47□□□□□ -0.41
TVP23C-201ENST00000225576 HOXA5P20719 270 aa12.47□□□□□ -0.41
TVP23C-201ENST00000225576 COA6Q5JTJ3 125 aaKnown RBP12.47□□□□□ -0.41
TVP23C-201ENST00000225576 Q6ZQT7 251 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms