RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 RAXQ9Y2V3 346 aa10.69□□□□□ -0.7
GABPB1-201ENST00000220429 C15orf53Q8NAA6 179 aa10.69□□□□□ -0.7
GABPB1-201ENST00000220429 OR13C6PQ8NH95 151 aa10.69□□□□□ -0.7
GABPB1-201ENST00000220429 TRAV8-1A0A0A6YYK1 113 aa10.68□□□□□ -0.7
GABPB1-201ENST00000220429 NPFFO15130 113 aa10.68□□□□□ -0.7
GABPB1-201ENST00000220429 DPM2O94777 84 aa10.68□□□□□ -0.7
GABPB1-201ENST00000220429 TCL1BO95988 128 aa10.68□□□□□ -0.7
GABPB1-201ENST00000220429 PRSS1P07477 247 aa10.68□□□□□ -0.7
GABPB1-201ENST00000220429 MYCNOSP40205 109 aa10.68□□□□□ -0.7
GABPB1-201ENST00000220429 TMEM101Q96IK0 257 aa10.68□□□□□ -0.7
GABPB1-201ENST00000220429 TMEM14BQ9NUH8 114 aa10.68□□□□□ -0.7
GABPB1-201ENST00000220429 IGF2RP11717 2491 aa10.68□□□□□ -0.7
GABPB1-201ENST00000220429 FOXA2Q9Y261 457 aaPredicted RBP10.68□□□□□ -0.7
GABPB1-201ENST00000220429 LINC01619G3V211 115 aa10.67□□□□□ -0.7
GABPB1-201ENST00000220429 TMEM178BH3BS89 294 aa10.67□□□□□ -0.7
GABPB1-201ENST00000220429 TMEM30BQ3MIR4 351 aa10.67□□□□□ -0.7
GABPB1-201ENST00000220429 PDPNQ86YL7 162 aa10.67□□□□□ -0.7
GABPB1-201ENST00000220429 FMC1Q96HJ9 113 aa10.67□□□□□ -0.7
GABPB1-201ENST00000220429 ZZEF1O43149 2961 aa10.67□□□□□ -0.7
GABPB1-201ENST00000220429 DUSP14O95147 198 aaKnown RBP10.67□□□□□ -0.7
GABPB1-201ENST00000220429 IGKV1-16P04430 117 aa10.67□□□□□ -0.7
GABPB1-201ENST00000220429 CCL3L1P16619 93 aa10.67□□□□□ -0.7
GABPB1-201ENST00000220429 HSPE1P61604 102 aaKnown RBP10.67□□□□□ -0.7
GABPB1-201ENST00000220429 TWIST1Q15672 202 aa10.67□□□□□ -0.7
GABPB1-201ENST00000220429 ZNF493Q6ZR52 646 aa10.67□□□□□ -0.7
GABPB1-201ENST00000220429 CCL17Q92583 94 aa10.67□□□□□ -0.7
GABPB1-201ENST00000220429 ODF3Q96PU9 254 aa10.67□□□□□ -0.7
GABPB1-201ENST00000220429 U3KQK5 164 aa10.67□□□□□ -0.7
GABPB1-201ENST00000220429 PGPA6NDG6 321 aa10.66□□□□□ -0.7
GABPB1-201ENST00000220429 F5H768 121 aa10.66□□□□□ -0.7
GABPB1-201ENST00000220429 NPYP01303 97 aa10.66□□□□□ -0.7
GABPB1-201ENST00000220429 ORMDL3Q8N138 153 aa10.66□□□□□ -0.7
GABPB1-201ENST00000220429 RNASE6Q93091 150 aaKnown RBP10.66□□□□□ -0.7
GABPB1-201ENST00000220429 FXYD5Q96DB9 178 aa10.66□□□□□ -0.7
GABPB1-201ENST00000220429 TRGV9Q99603 122 aa10.66□□□□□ -0.7
GABPB1-201ENST00000220429 PRADC1Q9BSG0 188 aa10.66□□□□□ -0.7
GABPB1-201ENST00000220429 LRBAP50851 2863 aa10.66□□□□□ -0.7
GABPB1-201ENST00000220429 E7EQL1 145 aa10.66□□□□□ -0.7
GABPB1-201ENST00000220429 HES1Q14469 280 aa10.66□□□□□ -0.7
GABPB1-201ENST00000220429 BAALCQ8WXS3 180 aa10.66□□□□□ -0.7
GABPB1-201ENST00000220429 A0A1B0GX51 115 aa10.65□□□□□ -0.7
GABPB1-201ENST00000220429 NDUFA7O95182 113 aa10.65□□□□□ -0.7
GABPB1-201ENST00000220429 TMEM200BQ69YZ2 307 aa10.65□□□□□ -0.7
GABPB1-201ENST00000220429 LYPD2Q6UXB3 125 aa10.65□□□□□ -0.7
GABPB1-201ENST00000220429 TMEM160Q9NX00 188 aa10.65□□□□□ -0.7
GABPB1-201ENST00000220429 ZNF833PQ6ZTB9 187 aa10.65□□□□□ -0.7
GABPB1-201ENST00000220429 ZNF714Q96N38 554 aa10.65□□□□□ -0.7
GABPB1-201ENST00000220429 NBASA2RRP1 2371 aa10.65□□□□□ -0.71
GABPB1-201ENST00000220429 OOSP1A8MZH6 123 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 SRSF12Q8WXF0 261 aaKnown RBP10.64□□□□□ -0.71
GABPB1-201ENST00000220429 FOXC2Q99958 501 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 VKORC1Q9BQB6 163 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 PRNDQ9UKY0 176 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 DCHS2Q6V1P9 2916 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 TPRP12270 2363 aaKnown RBP10.64□□□□□ -0.71
GABPB1-201ENST00000220429 TRAV40A0A0B4J280 105 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 NCBP2LA6PVI3 153 aaKnown RBP10.64□□□□□ -0.71
GABPB1-201ENST00000220429 COX7A2P2O60397 106 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 EMP1P54849 157 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 CTSZQ9UBR2 303 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 ABCA4P78363 2273 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 UPK2O00526 184 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 SLC25A20O43772 301 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 HERVK_113P63121 156 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 C9orf153Q5TBE3 101 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 C10orf113Q5VZT2 155 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 OR11H6Q8NGC7 330 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 MRPL20Q9BYC9 149 aaKnown RBP10.64□□□□□ -0.71
GABPB1-201ENST00000220429 EDA2RQ9HAV5 297 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 DYNLRB1Q9NP97 96 aa10.64□□□□□ -0.71
GABPB1-201ENST00000220429 ANKHD1Q8IWZ3 2542 aaKnown RBP10.63□□□□□ -0.71
GABPB1-201ENST00000220429 TRAV8-4A0A0B4J246 113 aa10.63□□□□□ -0.71
GABPB1-201ENST00000220429 UBE2D1P51668 147 aa10.63□□□□□ -0.71
GABPB1-201ENST00000220429 AMN1Q8IY45 258 aa10.63□□□□□ -0.71
GABPB1-201ENST00000220429 DUX5Q96PT3 197 aa10.63□□□□□ -0.71
GABPB1-201ENST00000220429 MSRB2Q9Y3D2 182 aa10.63□□□□□ -0.71
GABPB1-201ENST00000220429 TACC2O95359 2948 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 PLXNB1O43157 2135 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 NDUFB3O43676 98 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 ATP5LO75964 103 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 IGLC6P0CF74 106 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 SAA1P0DJI8 122 aaPredicted RBP10.62□□□□□ -0.71
GABPB1-201ENST00000220429 PRCDQ00LT1 54 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 FAM104BQ5XKR9 115 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 AAMDCQ9H7C9 122 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 SPTBN4Q9H254 2564 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 ATRXP46100 2492 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 TRAV2A0A0B4J234 112 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 M0R2P5 195 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 MLANAQ16655 118 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 C10orf126Q8N4M7 172 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 NAV3Q8IVL0 2385 aa10.62□□□□□ -0.71
GABPB1-201ENST00000220429 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.61□□□□□ -0.71
GABPB1-201ENST00000220429 PLAUP00749 431 aa10.61□□□□□ -0.71
GABPB1-201ENST00000220429 LOXP28300 417 aaPredicted RBP10.61□□□□□ -0.71
GABPB1-201ENST00000220429 LEPP41159 167 aa10.61□□□□□ -0.71
GABPB1-201ENST00000220429 Q8N1Y9 231 aa10.61□□□□□ -0.71
GABPB1-201ENST00000220429 TCRAP04437 139 aa10.61□□□□□ -0.71
GABPB1-201ENST00000220429 ORM2P19652 201 aa10.61□□□□□ -0.71
GABPB1-201ENST00000220429 RPS28P62857 69 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms