RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 C19orf84I3L1E1 186 aa13.3□□□□□ -0.28
USB1-201ENST00000219281 GOSR1O95249 250 aa13.3□□□□□ -0.28
USB1-201ENST00000219281 CLEC19AQ6UXS0 136 aa13.3□□□□□ -0.28
USB1-201ENST00000219281 JMJD8Q96S16 334 aa13.3□□□□□ -0.28
USB1-201ENST00000219281 NXT2Q9NPJ8 142 aaKnown RBP13.3□□□□□ -0.28
USB1-201ENST00000219281 AKAP6Q13023 2319 aa13.3□□□□□ -0.28
USB1-201ENST00000219281 IGHV3-49A0A0A0MS15 119 aa13.3□□□□□ -0.28
USB1-201ENST00000219281 IGKV3D-20A0A0C4DH25 116 aa13.3□□□□□ -0.28
USB1-201ENST00000219281 CLPSL1A2RUU4 121 aa13.3□□□□□ -0.28
USB1-201ENST00000219281 H3BUT2 72 aa13.3□□□□□ -0.28
USB1-201ENST00000219281 AGPAT4-IT1Q9H0P7 198 aa13.3□□□□□ -0.28
USB1-201ENST00000219281 C11orf21Q9P2W6 132 aa13.3□□□□□ -0.28
USB1-201ENST00000219281 RBAKDNA6NC62 111 aa13.29□□□□□ -0.28
USB1-201ENST00000219281 PRSS1P07477 247 aa13.29□□□□□ -0.28
USB1-201ENST00000219281 RAB9AP51151 201 aa13.29□□□□□ -0.28
USB1-201ENST00000219281 RAB37Q96AX2 223 aa13.29□□□□□ -0.28
USB1-201ENST00000219281 SELENOKQ9Y6D0 94 aa13.29□□□□□ -0.28
USB1-201ENST00000219281 LINC01548A6NM66 108 aa13.29□□□□□ -0.28
USB1-201ENST00000219281 G3V318 75 aa13.29□□□□□ -0.28
USB1-201ENST00000219281 ZNF207O43670 478 aaKnown RBP13.29□□□□□ -0.28
USB1-201ENST00000219281 ODF1Q14990 250 aa13.29□□□□□ -0.28
USB1-201ENST00000219281 CCDC140Q96MF4 163 aa13.29□□□□□ -0.28
USB1-201ENST00000219281 VPS25Q9BRG1 176 aa13.29□□□□□ -0.28
USB1-201ENST00000219281 SLC50A1Q9BRV3 221 aa13.29□□□□□ -0.28
USB1-201ENST00000219281 TMEM158Q8WZ71 300 aa13.28□□□□□ -0.28
USB1-201ENST00000219281 COL12A1Q99715 3063 aa13.28□□□□□ -0.28
USB1-201ENST00000219281 SPTAN1Q13813 2472 aaKnown RBP13.28□□□□□ -0.28
USB1-201ENST00000219281 A0A0G2JLM5 398 aa13.28□□□□□ -0.28
USB1-201ENST00000219281 TRGV3P03979 118 aa13.28□□□□□ -0.28
USB1-201ENST00000219281 UFSP1Q6NVU6 142 aa13.28□□□□□ -0.28
USB1-201ENST00000219281 AJUBAQ96IF1 538 aa13.28□□□□□ -0.28
USB1-201ENST00000219281 IGKV2D-26A0A0A0MRZ7 120 aa13.27□□□□□ -0.28
USB1-201ENST00000219281 TRAV8-2A0A0B4J237 113 aa13.27□□□□□ -0.28
USB1-201ENST00000219281 TM4SF20Q53R12 229 aa13.27□□□□□ -0.28
USB1-201ENST00000219281 GTF2H5Q6ZYL4 71 aa13.27□□□□□ -0.28
USB1-201ENST00000219281 CFAP46Q8IYW2 2715 aa13.27□□□□□ -0.29
USB1-201ENST00000219281 TTTY13Q9BZ97 58 aa13.27□□□□□ -0.29
USB1-201ENST00000219281 ZMAT4Q9H898 229 aa13.27□□□□□ -0.29
USB1-201ENST00000219281 UBTD1Q9HAC8 227 aa13.27□□□□□ -0.29
USB1-201ENST00000219281 HHLA3Q9XRX5 114 aa13.27□□□□□ -0.29
USB1-201ENST00000219281 TMEM78Q5T7P6 136 aa13.26□□□□□ -0.29
USB1-201ENST00000219281 Q8N8P6 123 aa13.26□□□□□ -0.29
USB1-201ENST00000219281 FOXC2Q99958 501 aa13.26□□□□□ -0.29
USB1-201ENST00000219281 WNK2Q9Y3S1 2297 aa13.26□□□□□ -0.29
USB1-201ENST00000219281 IGKCP01834 107 aa13.25□□□□□ -0.29
USB1-201ENST00000219281 UBE2E1P51965 193 aa13.25□□□□□ -0.29
USB1-201ENST00000219281 Q6ZQT7 251 aa13.25□□□□□ -0.29
USB1-201ENST00000219281 OR2K2Q8NGT1 345 aa13.25□□□□□ -0.29
USB1-201ENST00000219281 IGLV2-18A0A075B6J9 118 aa13.25□□□□□ -0.29
USB1-201ENST00000219281 TRAV26-2A0A0B4J265 109 aa13.25□□□□□ -0.29
USB1-201ENST00000219281 SAA4P35542 130 aa13.25□□□□□ -0.29
USB1-201ENST00000219281 PIFOQ8TCI5 191 aa13.25□□□□□ -0.29
USB1-201ENST00000219281 EEF1AKMT3Q96AZ1 226 aa13.25□□□□□ -0.29
USB1-201ENST00000219281 VPS13CQ709C8 3753 aa13.24□□□□□ -0.29
USB1-201ENST00000219281 K7EP34 96 aa13.24□□□□□ -0.29
USB1-201ENST00000219281 KLK9Q2XQG4 91 aa13.24□□□□□ -0.29
USB1-201ENST00000219281 C8orf86Q6ZUL3 223 aa13.24□□□□□ -0.29
USB1-201ENST00000219281 METTL26Q96S19 204 aa13.24□□□□□ -0.29
USB1-201ENST00000219281 KLK9Q9UKQ9 250 aa13.24□□□□□ -0.29
USB1-201ENST00000219281 IGHV7-4-1A0A0J9YVY3 117 aa13.24□□□□□ -0.29
USB1-201ENST00000219281 GTSCR1Q86UQ5 136 aa13.24□□□□□ -0.29
USB1-201ENST00000219281 UFC1Q9Y3C8 167 aa13.24□□□□□ -0.29
USB1-201ENST00000219281 SMIM15Q7Z3B0 74 aa13.23□□□□□ -0.29
USB1-201ENST00000219281 K7ERU9 68 aa13.23□□□□□ -0.29
USB1-201ENST00000219281 SMIM17P0DL12 118 aa13.23□□□□□ -0.29
USB1-201ENST00000219281 GCSHP23434 173 aa13.23□□□□□ -0.29
USB1-201ENST00000219281 TMEM8BA6NDV4 472 aa13.22□□□□□ -0.29
USB1-201ENST00000219281 SAP30O75446 220 aa13.22□□□□□ -0.29
USB1-201ENST00000219281 ATP5LO75964 103 aa13.22□□□□□ -0.29
USB1-201ENST00000219281 TRBV7-1A0A0A6YYK4 115 aa13.22□□□□□ -0.29
USB1-201ENST00000219281 DPM2O94777 84 aa13.22□□□□□ -0.29
USB1-201ENST00000219281 EFNA4P52798 201 aa13.22□□□□□ -0.29
USB1-201ENST00000219281 ZC2HC1BQ5TFG8 222 aa13.22□□□□□ -0.29
USB1-201ENST00000219281 NRACQ8N912 160 aa13.22□□□□□ -0.29
USB1-201ENST00000219281 CENPVL3A0A0U1RRI6 287 aa13.21□□□□□ -0.29
USB1-201ENST00000219281 A0A1W2PPM0 123 aa13.21□□□□□ -0.29
USB1-201ENST00000219281 PSMG4Q5JS54 123 aa13.21□□□□□ -0.29
USB1-201ENST00000219281 SPANXN1Q5VSR9 72 aa13.21□□□□□ -0.29
USB1-201ENST00000219281 TMEM160Q9NX00 188 aa13.21□□□□□ -0.29
USB1-201ENST00000219281 SMIM13P0DJ93 91 aa13.2□□□□□ -0.3
USB1-201ENST00000219281 FXYD2P54710 66 aa13.2□□□□□ -0.3
USB1-201ENST00000219281 LAGE3Q14657 143 aa13.2□□□□□ -0.3
USB1-201ENST00000219281 C9orf47Q6ZRZ4 202 aa13.2□□□□□ -0.3
USB1-201ENST00000219281 MYOZ3Q8TDC0 251 aa13.2□□□□□ -0.3
USB1-201ENST00000219281 MRPL53Q96EL3 112 aaKnown RBP13.2□□□□□ -0.3
USB1-201ENST00000219281 CHAC1Q9BUX1 264 aa13.2□□□□□ -0.3
USB1-201ENST00000219281 HIGD1BQ9P298 99 aa13.2□□□□□ -0.3
USB1-201ENST00000219281 SMPXQ9UHP9 88 aa13.2□□□□□ -0.3
USB1-201ENST00000219281 TRAV40A0A0B4J280 105 aa13.2□□□□□ -0.3
USB1-201ENST00000219281 ATP5G2Q06055 141 aa13.2□□□□□ -0.3
USB1-201ENST00000219281 COTL1Q14019 142 aa13.2□□□□□ -0.3
USB1-201ENST00000219281 C16orf92Q96LL3 132 aa13.2□□□□□ -0.3
USB1-201ENST00000219281 MEGF9Q9H1U4 602 aa13.19□□□□□ -0.3
USB1-201ENST00000219281 HIF1ANQ9NWT6 349 aa13.19□□□□□ -0.3
USB1-201ENST00000219281 MRPL35Q9NZE8 188 aaKnown RBP13.19□□□□□ -0.3
USB1-201ENST00000219281 SPCS1Q9Y6A9 102 aa13.19□□□□□ -0.3
USB1-201ENST00000219281 U3KQE9 123 aa13.19□□□□□ -0.3
USB1-201ENST00000219281 IGSF10Q6WRI0 2623 aa13.19□□□□□ -0.3
USB1-201ENST00000219281 TRBV25-1A0A075B6N4 114 aa13.19□□□□□ -0.3
USB1-201ENST00000219281 PRSS47A8MTI9 375 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms