RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CSNK1G2-AS1Q8NCQ2 148 aa19.86■□□□□ 0.77
CHMP4B-201ENST00000217402 SMDT1Q9H4I9 107 aa19.86■□□□□ 0.77
CHMP4B-201ENST00000217402 RETNQ9HD89 108 aa19.86■□□□□ 0.77
CHMP4B-201ENST00000217402 ZFP30Q9Y2G7 519 aa19.86■□□□□ 0.77
CHMP4B-201ENST00000217402 TRAV12-3A0A0B4J271 114 aa19.85■□□□□ 0.77
CHMP4B-201ENST00000217402 C7orf71A4D174 169 aa19.85■□□□□ 0.77
CHMP4B-201ENST00000217402 NDUFS6O75380 124 aaKnown RBP19.85■□□□□ 0.77
CHMP4B-201ENST00000217402 RBMY1A1P0DJD3 496 aaKnown RBP19.85■□□□□ 0.77
CHMP4B-201ENST00000217402 RBMY1CP0DJD4 496 aa19.85■□□□□ 0.77
CHMP4B-201ENST00000217402 RBMY1FQ15415 496 aaKnown RBP19.85■□□□□ 0.77
CHMP4B-201ENST00000217402 B9D2Q9BPU9 175 aa19.85■□□□□ 0.77
CHMP4B-201ENST00000217402 IGHV3OR16-12A0A075B7B8 117 aa19.84■□□□□ 0.77
CHMP4B-201ENST00000217402 LINC00862A6NCI5 91 aa19.84■□□□□ 0.77
CHMP4B-201ENST00000217402 GNG4P50150 75 aa19.84■□□□□ 0.77
CHMP4B-201ENST00000217402 Q6ZWC4 215 aa19.84■□□□□ 0.77
CHMP4B-201ENST00000217402 TRBV20OR9-2A0A075B6H5 130 aa19.84■□□□□ 0.77
CHMP4B-201ENST00000217402 RCHY1Q96PM5 261 aa19.84■□□□□ 0.77
CHMP4B-201ENST00000217402 GCGP01275 180 aa19.83■□□□□ 0.76
CHMP4B-201ENST00000217402 SMUG1Q53HV7 270 aa19.83■□□□□ 0.76
CHMP4B-201ENST00000217402 Q6ZQT7 251 aa19.83■□□□□ 0.76
CHMP4B-201ENST00000217402 PGPEP1LA6NFU8 196 aa19.82■□□□□ 0.76
CHMP4B-201ENST00000217402 TMEM183AQ8IXX5 376 aa19.82■□□□□ 0.76
CHMP4B-201ENST00000217402 C1orf158Q8N1D5 194 aa19.82■□□□□ 0.76
CHMP4B-201ENST00000217402 ZC2HC1AQ96GY0 325 aa19.82■□□□□ 0.76
CHMP4B-201ENST00000217402 SMIM7Q9BQ49 75 aa19.82■□□□□ 0.76
CHMP4B-201ENST00000217402 TMEM208Q9BTX3 173 aa19.82■□□□□ 0.76
CHMP4B-201ENST00000217402 ZNF80P51504 273 aaPredicted RBP19.81■□□□□ 0.76
CHMP4B-201ENST00000217402 GOLT1BQ9Y3E0 138 aa19.81■□□□□ 0.76
CHMP4B-201ENST00000217402 NBEAL2Q6ZNJ1 2754 aa19.81■□□□□ 0.76
CHMP4B-201ENST00000217402 RNF183Q96D59 192 aa19.8■□□□□ 0.76
CHMP4B-201ENST00000217402 NIPSNAP3BQ9BS92 247 aa19.8■□□□□ 0.76
CHMP4B-201ENST00000217402 ZNF727A8MUV8 499 aa19.8■□□□□ 0.76
CHMP4B-201ENST00000217402 SPRY2O43597 315 aa19.8■□□□□ 0.76
CHMP4B-201ENST00000217402 SFTA3P0C7M3 94 aa19.79■□□□□ 0.76
CHMP4B-201ENST00000217402 TM2D3Q9BRN9 247 aa19.79■□□□□ 0.76
CHMP4B-201ENST00000217402 MLST8Q9BVC4 326 aa19.79■□□□□ 0.76
CHMP4B-201ENST00000217402 PRKDCP78527 4128 aaKnown RBP19.78■□□□□ 0.76
CHMP4B-201ENST00000217402 C9JCJ5 164 aa19.78■□□□□ 0.76
CHMP4B-201ENST00000217402 ZNF324O75467 553 aaPredicted RBP19.78■□□□□ 0.76
CHMP4B-201ENST00000217402 MGST1P10620 155 aaKnown RBP19.78■□□□□ 0.76
CHMP4B-201ENST00000217402 Q6AWC8 147 aa19.78■□□□□ 0.76
CHMP4B-201ENST00000217402 UQCC3Q6UW78 93 aa19.78■□□□□ 0.76
CHMP4B-201ENST00000217402 LINC01587Q99440 93 aa19.78■□□□□ 0.76
CHMP4B-201ENST00000217402 SPATA25Q9BR10 227 aa19.78■□□□□ 0.76
CHMP4B-201ENST00000217402 OVOL2Q9BRP0 275 aa19.78■□□□□ 0.76
CHMP4B-201ENST00000217402 IGLV2-8P01709 118 aa19.77■□□□□ 0.76
CHMP4B-201ENST00000217402 SOHLH1Q5JUK2 328 aa19.77■□□□□ 0.76
CHMP4B-201ENST00000217402 PRR27Q6MZM9 219 aa19.77■□□□□ 0.76
CHMP4B-201ENST00000217402 ZNF705AQ6ZN79 300 aaPredicted RBP19.77■□□□□ 0.76
CHMP4B-201ENST00000217402 C20orf144Q9BQM9 153 aa19.77■□□□□ 0.76
CHMP4B-201ENST00000217402 COX8CQ7Z4L0 72 aa19.76■□□□□ 0.75
CHMP4B-201ENST00000217402 OR11H2Q8NH07 326 aa19.76■□□□□ 0.75
CHMP4B-201ENST00000217402 TP53TG1Q9Y2A0 90 aa19.76■□□□□ 0.75
CHMP4B-201ENST00000217402 TRAV21A0A0B4J279 112 aa19.76■□□□□ 0.75
CHMP4B-201ENST00000217402 PFN1P07737 140 aaKnown RBP19.76■□□□□ 0.75
CHMP4B-201ENST00000217402 HTN1P15515 57 aa19.76■□□□□ 0.75
CHMP4B-201ENST00000217402 TMEM256Q8N2U0 113 aa19.76■□□□□ 0.75
CHMP4B-201ENST00000217402 NAGKQ9UJ70 344 aa19.76■□□□□ 0.75
CHMP4B-201ENST00000217402 H7BYZ3 331 aa19.75■□□□□ 0.75
CHMP4B-201ENST00000217402 PRM2P04554 102 aa19.75■□□□□ 0.75
CHMP4B-201ENST00000217402 CRIP1P50238 77 aa19.75■□□□□ 0.75
CHMP4B-201ENST00000217402 MUC21Q5SSG8 566 aa19.75■□□□□ 0.75
CHMP4B-201ENST00000217402 EIF4E3Q8N5X7 224 aaKnown RBP19.75■□□□□ 0.75
CHMP4B-201ENST00000217402 ZMAT4Q9H898 229 aa19.75■□□□□ 0.75
CHMP4B-201ENST00000217402 FAM162BQ5T6X4 162 aa19.74■□□□□ 0.75
CHMP4B-201ENST00000217402 OCC1Q8TAD7 63 aa19.74■□□□□ 0.75
CHMP4B-201ENST00000217402 SMIM12Q96EX1 92 aa19.74■□□□□ 0.75
CHMP4B-201ENST00000217402 SH2D1AO60880 128 aa19.73■□□□□ 0.75
CHMP4B-201ENST00000217402 FAM74A3Q4VXF1 159 aa19.73■□□□□ 0.75
CHMP4B-201ENST00000217402 X6R8D5 127 aa19.73■□□□□ 0.75
CHMP4B-201ENST00000217402 ZNF705GA8MUZ8 300 aaPredicted RBP19.73■□□□□ 0.75
CHMP4B-201ENST00000217402 FABP5P3A8MUU1 101 aa19.72■□□□□ 0.75
CHMP4B-201ENST00000217402 OR5I1Q13606 314 aa19.72■□□□□ 0.75
CHMP4B-201ENST00000217402 K7EN84 100 aa19.71■□□□□ 0.75
CHMP4B-201ENST00000217402 PYGO2Q9BRQ0 406 aa19.71■□□□□ 0.75
CHMP4B-201ENST00000217402 C11orf21Q9P2W6 132 aa19.71■□□□□ 0.75
CHMP4B-201ENST00000217402 IGHV1OR15-1A0A075B7D0 117 aa19.69■□□□□ 0.74
CHMP4B-201ENST00000217402 TMEM241Q24JQ0 296 aa19.69■□□□□ 0.74
CHMP4B-201ENST00000217402 FAM159AQ6UWV7 190 aa19.69■□□□□ 0.74
CHMP4B-201ENST00000217402 TMEM218A2RU14 115 aa19.69■□□□□ 0.74
CHMP4B-201ENST00000217402 ANXA2RQ3ZCQ2 193 aa19.69■□□□□ 0.74
CHMP4B-201ENST00000217402 LINC01551Q86U37 167 aa19.69■□□□□ 0.74
CHMP4B-201ENST00000217402 NAT8Q9UHE5 227 aa19.69■□□□□ 0.74
CHMP4B-201ENST00000217402 CBY3A6NI87 242 aa19.68■□□□□ 0.74
CHMP4B-201ENST00000217402 M0R036 132 aa19.68■□□□□ 0.74
CHMP4B-201ENST00000217402 RRN3P1Q2M238 152 aa19.68■□□□□ 0.74
CHMP4B-201ENST00000217402 TP53TG3Q9ULZ0 132 aa19.68■□□□□ 0.74
CHMP4B-201ENST00000217402 LY96Q9Y6Y9 160 aa19.68■□□□□ 0.74
CHMP4B-201ENST00000217402 TENM3Q9P273 2699 aa19.67■□□□□ 0.74
CHMP4B-201ENST00000217402 ORM1P02763 201 aa19.67■□□□□ 0.74
CHMP4B-201ENST00000217402 NHLRC4P0CG21 123 aaPredicted RBP19.67■□□□□ 0.74
CHMP4B-201ENST00000217402 AZU1P20160 251 aa19.67■□□□□ 0.74
CHMP4B-201ENST00000217402 NEU1Q99519 415 aa19.67■□□□□ 0.74
CHMP4B-201ENST00000217402 SLC7A5P1Q8MH63 180 aa19.66■□□□□ 0.74
CHMP4B-201ENST00000217402 BIN3Q9NQY0 253 aa19.66■□□□□ 0.74
CHMP4B-201ENST00000217402 IGHV4-28A0A0C4DH34 117 aa19.65■□□□□ 0.74
CHMP4B-201ENST00000217402 DEFB4AO15263 64 aa19.65■□□□□ 0.74
CHMP4B-201ENST00000217402 ADCYAP1P18509 176 aa19.65■□□□□ 0.74
CHMP4B-201ENST00000217402 ADIRFQ15847 76 aa19.65■□□□□ 0.74
CHMP4B-201ENST00000217402 DAZAP1Q96EP5 407 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms