RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 LINC00574Q9H8X3 128 aa13.06□□□□□ -0.32
CTDP1-201ENST00000075430 APOMO95445 188 aa13.06□□□□□ -0.32
CTDP1-201ENST00000075430 MYOZ3Q8TDC0 251 aa13.06□□□□□ -0.32
CTDP1-201ENST00000075430 FAM208BQ5VWN6 2430 aa13.05□□□□□ -0.32
CTDP1-201ENST00000075430 MGPP08493 103 aa13.05□□□□□ -0.32
CTDP1-201ENST00000075430 SCGB1D4Q6XE38 83 aa13.05□□□□□ -0.32
CTDP1-201ENST00000075430 DTX2Q86UW9 622 aa13.05□□□□□ -0.32
CTDP1-201ENST00000075430 IGHV3OR16-10A0A075B7F0 116 aa13.05□□□□□ -0.32
CTDP1-201ENST00000075430 ASCL5Q7RTU5 278 aa13.05□□□□□ -0.32
CTDP1-201ENST00000075430 VKORC1Q9BQB6 163 aa13.05□□□□□ -0.32
CTDP1-201ENST00000075430 USP9YO00507 2555 aaPredicted RBP13.04□□□□□ -0.32
CTDP1-201ENST00000075430 H7C2G1 150 aa13.04□□□□□ -0.32
CTDP1-201ENST00000075430 NBR2O15453 112 aa13.04□□□□□ -0.32
CTDP1-201ENST00000075430 Q8NA96 180 aa13.04□□□□□ -0.32
CTDP1-201ENST00000075430 PTPN13Q12923 2485 aa13.04□□□□□ -0.32
CTDP1-201ENST00000075430 H3BVH4 76 aa13.04□□□□□ -0.32
CTDP1-201ENST00000075430 ZNF562Q6V9R5 426 aa13.04□□□□□ -0.32
CTDP1-201ENST00000075430 NUP37Q8NFH4 326 aa13.04□□□□□ -0.32
CTDP1-201ENST00000075430 CENPEQ02224 2701 aa13.04□□□□□ -0.32
CTDP1-201ENST00000075430 ODF1Q14990 250 aa13.04□□□□□ -0.32
CTDP1-201ENST00000075430 CFHR4Q92496 578 aa13.04□□□□□ -0.32
CTDP1-201ENST00000075430 OVOL3O00110 214 aa13.03□□□□□ -0.32
CTDP1-201ENST00000075430 DPM2O94777 84 aa13.03□□□□□ -0.32
CTDP1-201ENST00000075430 SIGMAR1Q99720 223 aa13.03□□□□□ -0.32
CTDP1-201ENST00000075430 HIVEP3Q5T1R4 2406 aa13.03□□□□□ -0.32
CTDP1-201ENST00000075430 DLX6P56179 175 aa13.03□□□□□ -0.32
CTDP1-201ENST00000075430 TMEM14CQ9P0S9 112 aa13.03□□□□□ -0.32
CTDP1-201ENST00000075430 IGLV1-47P01700 117 aa13.02□□□□□ -0.32
CTDP1-201ENST00000075430 CLEC3BP05452 202 aa13.02□□□□□ -0.32
CTDP1-201ENST00000075430 RPL7P18124 248 aaKnown RBP13.02□□□□□ -0.32
CTDP1-201ENST00000075430 BMI1P35226 326 aa13.02□□□□□ -0.32
CTDP1-201ENST00000075430 SRSF9Q13242 221 aaKnown RBP eCLIP13.02□□□□□ -0.32
CTDP1-201ENST00000075430 TMEM30BQ3MIR4 351 aa13.02□□□□□ -0.32
CTDP1-201ENST00000075430 CLEC19AQ6UXS0 136 aa13.02□□□□□ -0.32
CTDP1-201ENST00000075430 OR5A1Q8NGJ0 315 aa13.02□□□□□ -0.32
CTDP1-201ENST00000075430 WI2-2373I1.2A0A1W2PRP0 233 aa13.02□□□□□ -0.32
CTDP1-201ENST00000075430 FABP5P3A8MUU1 101 aa13.02□□□□□ -0.32
CTDP1-201ENST00000075430 S100A4P26447 101 aaKnown RBP13.02□□□□□ -0.32
CTDP1-201ENST00000075430 Q6AWC8 147 aa13.02□□□□□ -0.33
CTDP1-201ENST00000075430 INS-IGF2F8WCM5 200 aa13.01□□□□□ -0.33
CTDP1-201ENST00000075430 PTH2Q96A98 100 aa13.01□□□□□ -0.33
CTDP1-201ENST00000075430 ACACBO00763 2458 aa13.01□□□□□ -0.33
CTDP1-201ENST00000075430 LINC00311Q8N616 119 aa13.01□□□□□ -0.33
CTDP1-201ENST00000075430 DPM3Q9P2X0 92 aa13.01□□□□□ -0.33
CTDP1-201ENST00000075430 TLN2Q9Y4G6 2542 aa13.01□□□□□ -0.33
CTDP1-201ENST00000075430 PVRIGQ6DKI7 326 aa13.01□□□□□ -0.33
CTDP1-201ENST00000075430 SHISA9B4DS77 424 aa13□□□□□ -0.33
CTDP1-201ENST00000075430 MYO9AB2RTY4 2548 aa13□□□□□ -0.33
CTDP1-201ENST00000075430 GAGE12HA6NDE8 117 aa13□□□□□ -0.33
CTDP1-201ENST00000075430 G3V318 75 aa13□□□□□ -0.33
CTDP1-201ENST00000075430 IGF1P05019 195 aa13□□□□□ -0.33
CTDP1-201ENST00000075430 CD300EQ496F6 205 aaPredicted RBP13□□□□□ -0.33
CTDP1-201ENST00000075430 TTC9CQ8N5M4 171 aa13□□□□□ -0.33
CTDP1-201ENST00000075430 RAXQ9Y2V3 346 aa13□□□□□ -0.33
CTDP1-201ENST00000075430 CLUHP3Q96NS8 147 aa13□□□□□ -0.33
CTDP1-201ENST00000075430 FANCD2OSQ96PS1 177 aa12.99□□□□□ -0.33
CTDP1-201ENST00000075430 MRPL16Q9NX20 251 aaKnown RBP12.99□□□□□ -0.33
CTDP1-201ENST00000075430 A0A1B0GW15 77 aa12.99□□□□□ -0.33
CTDP1-201ENST00000075430 CRYGBP07316 175 aa12.99□□□□□ -0.33
CTDP1-201ENST00000075430 SRD5A1P18405 259 aa12.99□□□□□ -0.33
CTDP1-201ENST00000075430 PSMB2P49721 201 aa12.99□□□□□ -0.33
CTDP1-201ENST00000075430 RPS20P60866 119 aaKnown RBP12.99□□□□□ -0.33
CTDP1-201ENST00000075430 KLHL30-AS1Q8NEE0 82 aa12.99□□□□□ -0.33
CTDP1-201ENST00000075430 RNF185Q96GF1 192 aa12.99□□□□□ -0.33
CTDP1-201ENST00000075430 HHLA3Q9XRX5 114 aa12.99□□□□□ -0.33
CTDP1-201ENST00000075430 C15orf32Q32M92 178 aa12.99□□□□□ -0.33
CTDP1-201ENST00000075430 CEND1Q8N111 149 aa12.99□□□□□ -0.33
CTDP1-201ENST00000075430 C20orf78Q9BR46 151 aa12.99□□□□□ -0.33
CTDP1-201ENST00000075430 WNK1Q9H4A3 2382 aa12.98□□□□□ -0.33
CTDP1-201ENST00000075430 IGLL5B9A064 214 aa12.98□□□□□ -0.33
CTDP1-201ENST00000075430 ZNF672Q499Z4 452 aaPredicted RBP12.98□□□□□ -0.33
CTDP1-201ENST00000075430 C11orf21Q9P2W6 132 aa12.98□□□□□ -0.33
CTDP1-201ENST00000075430 C12orf74Q32Q52 190 aa12.98□□□□□ -0.33
CTDP1-201ENST00000075430 SPAG8Q99932 426 aaPredicted RBP12.98□□□□□ -0.33
CTDP1-201ENST00000075430 SRSF8Q9BRL6 282 aaKnown RBP12.98□□□□□ -0.33
CTDP1-201ENST00000075430 B9A039 149 aa12.97□□□□□ -0.33
CTDP1-201ENST00000075430 C5orf64Q2M2E5 130 aa12.97□□□□□ -0.33
CTDP1-201ENST00000075430 GAGE13Q4V321 117 aa12.97□□□□□ -0.33
CTDP1-201ENST00000075430 C14orf178Q8N769 122 aaPredicted RBP12.97□□□□□ -0.33
CTDP1-201ENST00000075430 SMAD5-AS1Q9Y6J3 95 aa12.97□□□□□ -0.33
CTDP1-201ENST00000075430 OR11H12B2RN74 326 aa12.97□□□□□ -0.33
CTDP1-201ENST00000075430 HLA-DRB4P13762 266 aa12.97□□□□□ -0.33
CTDP1-201ENST00000075430 ZNF493Q6ZR52 646 aa12.97□□□□□ -0.33
CTDP1-201ENST00000075430 OR11H1Q8NG94 326 aa12.97□□□□□ -0.33
CTDP1-201ENST00000075430 OR11H2Q8NH07 326 aa12.97□□□□□ -0.33
CTDP1-201ENST00000075430 PGPEP1Q9NXJ5 209 aa12.97□□□□□ -0.33
CTDP1-201ENST00000075430 HLA-DRB4X5D2U9 266 aa12.97□□□□□ -0.33
CTDP1-201ENST00000075430 TIMD4Q96H15 378 aa12.97□□□□□ -0.33
CTDP1-201ENST00000075430 SCGB3A1Q96QR1 104 aa12.97□□□□□ -0.33
CTDP1-201ENST00000075430 IGHV3-64A0A075B6Q5 118 aa12.96□□□□□ -0.33
CTDP1-201ENST00000075430 J3QR89 54 aa12.96□□□□□ -0.33
CTDP1-201ENST00000075430 TMEM78Q5T7P6 136 aa12.96□□□□□ -0.33
CTDP1-201ENST00000075430 SONP18583 2426 aaKnown RBP12.96□□□□□ -0.34
CTDP1-201ENST00000075430 RPL39LQ96EH5 51 aaKnown RBP12.96□□□□□ -0.34
CTDP1-201ENST00000075430 AGPAT4-IT1Q9H0P7 198 aa12.96□□□□□ -0.34
CTDP1-201ENST00000075430 ZFYVE26Q68DK2 2539 aa12.95□□□□□ -0.34
CTDP1-201ENST00000075430 LINC01548A6NM66 108 aa12.95□□□□□ -0.34
CTDP1-201ENST00000075430 CTSGP08311 255 aa12.95□□□□□ -0.34
CTDP1-201ENST00000075430 SPOCK3Q9BQ16 436 aa12.95□□□□□ -0.34
CTDP1-201ENST00000075430 POLQO75417 2590 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms