RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 OR11H6Q8NGC7 330 aa12.88□□□□□ -0.35
HNRNPU-228ENST00000640306 SRSF8Q9BRL6 282 aaKnown RBP12.88□□□□□ -0.35
HNRNPU-228ENST00000640306 DKK2Q9UBU2 259 aa12.88□□□□□ -0.35
HNRNPU-228ENST00000640306 CTSGP08311 255 aa12.87□□□□□ -0.35
HNRNPU-228ENST00000640306 GATA1P15976 413 aaPredicted RBP12.87□□□□□ -0.35
HNRNPU-228ENST00000640306 ECSCRQ19T08 205 aa12.87□□□□□ -0.35
HNRNPU-228ENST00000640306 TMEM97Q5BJF2 176 aa12.87□□□□□ -0.35
HNRNPU-228ENST00000640306 ZNF562Q6V9R5 426 aa12.87□□□□□ -0.35
HNRNPU-228ENST00000640306 NPBQ8NG41 125 aa12.87□□□□□ -0.35
HNRNPU-228ENST00000640306 RPL7P18124 248 aaKnown RBP12.87□□□□□ -0.35
HNRNPU-228ENST00000640306 UCNP55089 124 aa12.87□□□□□ -0.35
HNRNPU-228ENST00000640306 PDE6HQ13956 83 aa12.87□□□□□ -0.35
HNRNPU-228ENST00000640306 LY6DQ14210 128 aa12.87□□□□□ -0.35
HNRNPU-228ENST00000640306 PCP2Q8IVA1 136 aa12.87□□□□□ -0.35
HNRNPU-228ENST00000640306 RAB37Q96AX2 223 aa12.87□□□□□ -0.35
HNRNPU-228ENST00000640306 CD5LO43866 347 aa12.86□□□□□ -0.35
HNRNPU-228ENST00000640306 IGHG4P01861 327 aa12.86□□□□□ -0.35
HNRNPU-228ENST00000640306 GATD1Q8NB37 220 aa12.86□□□□□ -0.35
HNRNPU-228ENST00000640306 ZNF207O43670 478 aaKnown RBP12.86□□□□□ -0.35
HNRNPU-228ENST00000640306 HBDP02042 147 aa12.86□□□□□ -0.35
HNRNPU-228ENST00000640306 FGF6P10767 208 aa12.86□□□□□ -0.35
HNRNPU-228ENST00000640306 VMO1Q7Z5L0 202 aa12.86□□□□□ -0.35
HNRNPU-228ENST00000640306 IFI27L1Q96BM0 104 aa12.86□□□□□ -0.35
HNRNPU-228ENST00000640306 TIMD4Q96H15 378 aa12.86□□□□□ -0.35
HNRNPU-228ENST00000640306 TTTY13Q9BZ97 58 aa12.86□□□□□ -0.35
HNRNPU-228ENST00000640306 CST9LQ9H4G1 147 aa12.86□□□□□ -0.35
HNRNPU-228ENST00000640306 NDUFS7O75251 213 aa12.85□□□□□ -0.35
HNRNPU-228ENST00000640306 TMEM11P17152 192 aa12.85□□□□□ -0.35
HNRNPU-228ENST00000640306 SAPCD1Q5SSQ6 148 aa12.85□□□□□ -0.35
HNRNPU-228ENST00000640306 PRTN3P24158 256 aa12.84□□□□□ -0.35
HNRNPU-228ENST00000640306 ZNF575Q86XF7 245 aa12.84□□□□□ -0.35
HNRNPU-228ENST00000640306 VPS25Q9BRG1 176 aa12.84□□□□□ -0.35
HNRNPU-228ENST00000640306 U3KQK5 164 aa12.84□□□□□ -0.35
HNRNPU-228ENST00000640306 CACNA1AO00555 2505 aa12.83□□□□□ -0.35
HNRNPU-228ENST00000640306 ODF3BA8MYP8 253 aa12.83□□□□□ -0.36
HNRNPU-228ENST00000640306 GAGE12BA1L429 117 aa12.83□□□□□ -0.36
HNRNPU-228ENST00000640306 ZFP36P26651 326 aaKnown RBP12.83□□□□□ -0.36
HNRNPU-228ENST00000640306 C15orf32Q32M92 178 aa12.83□□□□□ -0.36
HNRNPU-228ENST00000640306 Q6ZQT7 251 aa12.83□□□□□ -0.36
HNRNPU-228ENST00000640306 IL17RELQ6ZVW7 336 aa12.83□□□□□ -0.36
HNRNPU-228ENST00000640306 S100A7AQ86SG5 101 aa12.83□□□□□ -0.36
HNRNPU-228ENST00000640306 TTC9CQ8N5M4 171 aa12.83□□□□□ -0.36
HNRNPU-228ENST00000640306 IGHV7-81A0A0B4J1V7 117 aa12.82□□□□□ -0.36
HNRNPU-228ENST00000640306 H3BUT2 72 aa12.82□□□□□ -0.36
HNRNPU-228ENST00000640306 CLEC3BP05452 202 aa12.82□□□□□ -0.36
HNRNPU-228ENST00000640306 PEF1Q9UBV8 284 aaKnown RBP12.82□□□□□ -0.36
HNRNPU-228ENST00000640306 PKD1L2Q7Z442 2459 aa12.82□□□□□ -0.36
HNRNPU-228ENST00000640306 VPS13CQ709C8 3753 aa12.82□□□□□ -0.36
HNRNPU-228ENST00000640306 LGALS9BQ3B8N2 356 aa12.82□□□□□ -0.36
HNRNPU-228ENST00000640306 LGALS9CQ6DKI2 356 aa12.82□□□□□ -0.36
HNRNPU-228ENST00000640306 CDKN1BP46527 198 aa12.82□□□□□ -0.36
HNRNPU-228ENST00000640306 OCIAD2Q56VL3 154 aa12.82□□□□□ -0.36
HNRNPU-228ENST00000640306 BMI1P35226 326 aa12.81□□□□□ -0.36
HNRNPU-228ENST00000640306 LEPP41159 167 aa12.81□□□□□ -0.36
HNRNPU-228ENST00000640306 JMJD8Q96S16 334 aa12.81□□□□□ -0.36
HNRNPU-228ENST00000640306 A1L4Q6 167 aa12.81□□□□□ -0.36
HNRNPU-228ENST00000640306 GAGE10A6NGK3 116 aa12.81□□□□□ -0.36
HNRNPU-228ENST00000640306 LINC01548A6NM66 108 aa12.81□□□□□ -0.36
HNRNPU-228ENST00000640306 G3V318 75 aa12.81□□□□□ -0.36
HNRNPU-228ENST00000640306 IGLC6P0CF74 106 aa12.81□□□□□ -0.36
HNRNPU-228ENST00000640306 RNF185Q96GF1 192 aa12.81□□□□□ -0.36
HNRNPU-228ENST00000640306 AP1S3Q96PC3 154 aa12.81□□□□□ -0.36
HNRNPU-228ENST00000640306 J3KRW8 73 aa12.8□□□□□ -0.36
HNRNPU-228ENST00000640306 SMAD7O15105 426 aaKnown RBP12.8□□□□□ -0.36
HNRNPU-228ENST00000640306 PAX8Q06710 450 aa12.8□□□□□ -0.36
HNRNPU-228ENST00000640306 KLRB1Q12918 225 aa12.8□□□□□ -0.36
HNRNPU-228ENST00000640306 KIR3DS1Q14943 382 aa12.8□□□□□ -0.36
HNRNPU-228ENST00000640306 CLEC19AQ6UXS0 136 aa12.8□□□□□ -0.36
HNRNPU-228ENST00000640306 BOD1L2Q8IYS8 172 aa12.8□□□□□ -0.36
HNRNPU-228ENST00000640306 TRAV26-2A0A0B4J265 109 aa12.79□□□□□ -0.36
HNRNPU-228ENST00000640306 K7EMI3 77 aa12.79□□□□□ -0.36
HNRNPU-228ENST00000640306 PRSS1P07477 247 aa12.79□□□□□ -0.36
HNRNPU-228ENST00000640306 MAP1LC3AQ9H492 121 aa12.79□□□□□ -0.36
HNRNPU-228ENST00000640306 FABP5P3A8MUU1 101 aa12.79□□□□□ -0.36
HNRNPU-228ENST00000640306 M0R1W7 72 aa12.79□□□□□ -0.36
HNRNPU-228ENST00000640306 SPRY2O43597 315 aa12.79□□□□□ -0.36
HNRNPU-228ENST00000640306 SAP30O75446 220 aa12.79□□□□□ -0.36
HNRNPU-228ENST00000640306 IGKV2D-26A0A0A0MRZ7 120 aa12.78□□□□□ -0.36
HNRNPU-228ENST00000640306 TNFRSF6BO95407 300 aa12.78□□□□□ -0.36
HNRNPU-228ENST00000640306 TRGV3P03979 118 aa12.78□□□□□ -0.36
HNRNPU-228ENST00000640306 LINC00527Q9UJ94 153 aa12.78□□□□□ -0.36
HNRNPU-228ENST00000640306 ATP6V0E1O15342 81 aa12.78□□□□□ -0.36
HNRNPU-228ENST00000640306 S100A7P31151 101 aa12.78□□□□□ -0.36
HNRNPU-228ENST00000640306 SEC11AP67812 179 aa12.78□□□□□ -0.36
HNRNPU-228ENST00000640306 CCDC144NLQ6NUI1 221 aa12.78□□□□□ -0.36
HNRNPU-228ENST00000640306 Q8N9W7 124 aa12.78□□□□□ -0.36
HNRNPU-228ENST00000640306 C11orf21Q9P2W6 132 aa12.78□□□□□ -0.36
HNRNPU-228ENST00000640306 UFC1Q9Y3C8 167 aa12.78□□□□□ -0.36
HNRNPU-228ENST00000640306 ACACBO00763 2458 aa12.77□□□□□ -0.36
HNRNPU-228ENST00000640306 Q8N6K4 173 aa12.77□□□□□ -0.37
HNRNPU-228ENST00000640306 ZNF48Q96MX3 618 aaPredicted RBP12.77□□□□□ -0.37
HNRNPU-228ENST00000640306 RPS20P60866 119 aaKnown RBP12.76□□□□□ -0.37
HNRNPU-228ENST00000640306 ADORA2A-AS1P86434 159 aa12.76□□□□□ -0.37
HNRNPU-228ENST00000640306 DTX2Q86UW9 622 aa12.76□□□□□ -0.37
HNRNPU-228ENST00000640306 IGKV3D-20A0A0C4DH25 116 aa12.76□□□□□ -0.37
HNRNPU-228ENST00000640306 GTSCR1Q86UQ5 136 aa12.76□□□□□ -0.37
HNRNPU-228ENST00000640306 TMEM158Q8WZ71 300 aa12.76□□□□□ -0.37
HNRNPU-228ENST00000640306 FOXC2Q99958 501 aa12.76□□□□□ -0.37
HNRNPU-228ENST00000640306 A6NDN8 102 aa12.75□□□□□ -0.37
HNRNPU-228ENST00000640306 FBLL1A6NHQ2 334 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms