RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 VAMP8Q9BV40 100 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 GFRA4Q9GZZ7 299 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 ZNF492Q9P255 531 aa4.34□□□□□ -1.71
CHD2-227ENST00000637572 ITPR1Q14643 2758 aa4.34□□□□□ -1.72
CHD2-227ENST00000637572 HIGD1CA8MV81 97 aa4.34□□□□□ -1.72
CHD2-227ENST00000637572 LY6LH3BQJ8 138 aa4.34□□□□□ -1.72
CHD2-227ENST00000637572 IGF1P05019 195 aa4.34□□□□□ -1.72
CHD2-227ENST00000637572 CD7P09564 240 aa4.34□□□□□ -1.72
CHD2-227ENST00000637572 ZNF688P0C7X2 276 aa4.34□□□□□ -1.72
CHD2-227ENST00000637572 DEFB121Q5J5C9 76 aa4.34□□□□□ -1.72
CHD2-227ENST00000637572 LINC01551Q86U37 167 aa4.34□□□□□ -1.72
CHD2-227ENST00000637572 HAPLN4Q86UW8 402 aa4.34□□□□□ -1.72
CHD2-227ENST00000637572 NUDT10Q8NFP7 164 aa4.34□□□□□ -1.72
CHD2-227ENST00000637572 OR10AG1Q8NH19 301 aa4.34□□□□□ -1.72
CHD2-227ENST00000637572 NUDT11Q96G61 164 aa4.34□□□□□ -1.72
CHD2-227ENST00000637572 SPATA25Q9BR10 227 aa4.34□□□□□ -1.72
CHD2-227ENST00000637572 FNDC4Q9H6D8 234 aaPredicted RBP4.34□□□□□ -1.72
CHD2-227ENST00000637572 MGAQ8IWI9 3026 aa4.34□□□□□ -1.72
CHD2-227ENST00000637572 TRBV24-1A0A075B6N3 115 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 K7EIM0 57 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 UBE2L6O14933 153 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 TCTEX1D4Q5JR98 221 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 Q6YL49 198 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 ORMDL3Q8N138 153 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 EXOC3-AS1Q8N2X6 119 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 NIT2Q9NQR4 276 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 SMPXQ9UHP9 88 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 TNFRSF18Q9Y5U5 241 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 TRBV20OR9-2A0A075B6H5 130 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 CLPSL1A2RUU4 121 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 TEX22C9J3V5 150 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 IGLV1-40P01703 118 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 TRGC2P03986 189 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 PAX2Q02962 417 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 ZNF415Q09FC8 603 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 EIF4EBP1Q13541 118 aaPredicted RBP4.33□□□□□ -1.72
CHD2-227ENST00000637572 AMMECR1LQ6DCA0 310 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 TMEM136Q6ZRR5 245 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 OR10D4PQ8NGN7 298 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 GNB1LQ9BYB4 327 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 AKAP13Q12802 2813 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 TRAV25A0A0B4J276 109 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 M0R381 172 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 DEFA6Q01524 100 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 GPHB5Q86YW7 130 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 C11orf52Q96A22 123 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 C5orf30Q96GV9 206 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 DSCAMO60469 2012 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 CPAMD8Q8IZJ3 1885 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 ITPR2Q14571 2701 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 TGIF2-C20orf24A0A0A6YYL0 155 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 RBAKDNA6NC62 111 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 SNCGO76070 127 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 LY6G6DO95868 133 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 MYCNOSP40205 109 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 NDPQ00604 133 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 TMEM97Q5BJF2 176 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 Q86TA4 180 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 PACRGQ96M98 296 aaPredicted RBP4.33□□□□□ -1.72
CHD2-227ENST00000637572 PRELID3AQ96N28 172 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 SPAG8Q99932 426 aaPredicted RBP4.33□□□□□ -1.72
CHD2-227ENST00000637572 SLC25A2Q9BXI2 301 aa4.33□□□□□ -1.72
CHD2-227ENST00000637572 TRGV2A0A075B6R0 118 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 DIRC3C9JPN6 131 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 SMIM6P0DI80 62 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 SRIP30626 198 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 PMCHL1Q16048 86 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 BCL6BQ8N143 479 aaPredicted RBP4.32□□□□□ -1.72
CHD2-227ENST00000637572 DMXL1Q9Y485 3027 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 IGKV2-40A0A087WW87 121 aaPredicted RBP4.32□□□□□ -1.72
CHD2-227ENST00000637572 CCL24O00175 119 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 SLC17A3O00476 420 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 IGKV2D-40P01614 121 aaPredicted RBP4.32□□□□□ -1.72
CHD2-227ENST00000637572 CDSNQ15517 529 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 TMEM70Q9BUB7 260 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 PROP1O75360 226 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 ATP5LO75964 103 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 LEPROTL1O95214 131 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 NUDT3O95989 172 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 HOXD3P31249 432 aaPredicted RBP4.32□□□□□ -1.72
CHD2-227ENST00000637572 KRTAP10-9P60411 292 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 BLCAPP62952 87 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 FAM74A4Q5TZK3 123 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 IL17RELQ6ZVW7 336 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 FAM231DQ6ZW35 169 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 LYPD6BQ8NI32 183 aa4.32□□□□□ -1.72
CHD2-227ENST00000637572 RNASE7Q9H1E1 156 aaKnown RBP4.32□□□□□ -1.72
CHD2-227ENST00000637572 NXT2Q9NPJ8 142 aaKnown RBP4.32□□□□□ -1.72
CHD2-227ENST00000637572 CHD3Q12873 2000 aaKnown RBP4.32□□□□□ -1.72
CHD2-227ENST00000637572 VWC2LB2RUY7 222 aa4.31□□□□□ -1.72
CHD2-227ENST00000637572 FCN3O75636 299 aa4.31□□□□□ -1.72
CHD2-227ENST00000637572 IGKV1-17P01599 117 aa4.31□□□□□ -1.72
CHD2-227ENST00000637572 IGHG4P01861 327 aa4.31□□□□□ -1.72
CHD2-227ENST00000637572 CTSGP08311 255 aa4.31□□□□□ -1.72
CHD2-227ENST00000637572 INSL3P51460 131 aa4.31□□□□□ -1.72
CHD2-227ENST00000637572 APOC4P55056 127 aa4.31□□□□□ -1.72
CHD2-227ENST00000637572 C9orf66Q5T8R8 295 aa4.31□□□□□ -1.72
CHD2-227ENST00000637572 Q6ZPA2 131 aa4.31□□□□□ -1.72
CHD2-227ENST00000637572 HSPB9Q9BQS6 159 aa4.31□□□□□ -1.72
CHD2-227ENST00000637572 RNF224P0DH78 156 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms