RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 IGHV3-66A0A0C4DH42 116 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 GRIFINA4D1Z8 144 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 SOCS3O14543 225 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 OVOL1O14753 267 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 SERF1AO75920 110 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 IGHV3-11P01762 117 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 GPX1P07203 203 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 GZMBP10144 247 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 SRIP30626 198 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 CAMPP49913 170 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 ZNF138P52744 262 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 HIST1H1AQ02539 215 aaPredicted RBP4.24□□□□□ -1.73
NEK3-211ENST00000629912 SAMD13Q5VXD3 122 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 ZNF493Q6ZR52 646 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 Q71RC1 249 aaPredicted RBP4.24□□□□□ -1.73
NEK3-211ENST00000629912 ZNF575Q86XF7 245 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 C18orf32Q8TCD1 76 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 C16orf92Q96LL3 132 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 LINC00477Q96M19 166 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 ZNF702PQ9H963 129 aa4.24□□□□□ -1.73
NEK3-211ENST00000629912 KMT2BQ9UMN6 2715 aaPredicted RBP4.24□□□□□ -1.73
NEK3-211ENST00000629912 APCP25054 2843 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 CSMD1Q96PZ7 3565 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 IGHV3OR16-13A0A075B7E8 117 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 LOC102724200A0A096LPH7 203 aaPredicted RBP4.23□□□□□ -1.73
NEK3-211ENST00000629912 IGHV3-49A0A0A0MS15 119 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 IGHV3-74A0A0B4J1X5 117 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 TRBV7-9A0A0J9YWB2 115 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 A0A1B0GUS0 222 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 PCP4L1A6NKN8 68 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 F2Z2F3 143 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 LGALS9O00182 355 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 HOXA3O43365 443 aaPredicted RBP4.23□□□□□ -1.73
NEK3-211ENST00000629912 IGLC6P0CF74 106 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 ZNF80P51504 273 aaPredicted RBP4.23□□□□□ -1.73
NEK3-211ENST00000629912 ERCC8Q13216 396 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 LINC01559Q495D7 138 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 TMEM78Q5T7P6 136 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 REC114Q7Z4M0 266 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 RNF182Q8N6D2 247 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 BORCS7Q96B45 105 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 UBE2E2Q96LR5 201 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 FOXC2Q99958 501 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 RHPN1-AS1Q9BWJ2 59 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 DAZ1Q9NQZ3 744 aaKnown RBP4.23□□□□□ -1.73
NEK3-211ENST00000629912 UFC1Q9Y3C8 167 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 CELSR1Q9NYQ6 3014 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 TEX15Q9BXT5 2789 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 SVEP1Q4LDE5 3571 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 CENPEQ02224 2701 aa4.23□□□□□ -1.73
NEK3-211ENST00000629912 NAV2Q8IVL1 2488 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 ZFHX3Q15911 3703 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 POLQO75417 2590 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 DOPEY2Q9Y3R5 2298 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 LGALS1P09382 135 aaKnown RBP4.22□□□□□ -1.73
NEK3-211ENST00000629912 ARMS2P0C7Q2 107 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 CTRLP40313 264 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 IQCJQ1A5X6 159 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 TMEM95Q3KNT9 176 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 TM4SF20Q53R12 229 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 LYZL1Q6UWQ5 148 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 LCNL1Q6ZST4 164 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 IL17RELQ6ZVW7 336 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 NIT1Q86X76 327 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 APRG1Q8IVJ8 170 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 SIGLECL1Q8N7X8 197 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 WFDC12Q8WWY7 111 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 CHCHD1Q96BP2 118 aaKnown RBP4.22□□□□□ -1.73
NEK3-211ENST00000629912 KCNS1Q96KK3 526 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 C20orf173Q96LM9 149 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 FAM19A4Q96LR4 140 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 SSBP4Q9BWG4 385 aaPredicted RBP4.22□□□□□ -1.73
NEK3-211ENST00000629912 CNFNQ9BYD5 112 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 NRN1Q9NPD7 142 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 U3KQK5 164 aa4.22□□□□□ -1.73
NEK3-211ENST00000629912 IGHV4-4A0A075B6R2 117 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 IGKV3D-20A0A0C4DH25 116 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 ZNF324O75467 553 aaPredicted RBP4.21□□□□□ -1.74
NEK3-211ENST00000629912 ORM1P02763 201 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 RPLP1P05386 114 aaKnown RBP4.21□□□□□ -1.74
NEK3-211ENST00000629912 RAB4AP20338 218 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 PMCHP20382 165 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 ID1P41134 155 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 PKIAP61925 76 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 FAM104BQ5XKR9 115 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 CDPF1Q6NVV7 123 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 C10orf99Q6UWK7 81 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 Q6ZWC4 215 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 FER1L6-AS1Q8NA97 138 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 ZNF738Q8NE65 137 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 WFDC11Q8NEX6 87 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 OR10J6PQ8NGY7 276 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 Q8TAT8 98 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 URB1-AS1Q96HZ7 61 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 RCHY1Q96PM5 261 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 SAMD10Q9BYL1 202 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 NAGKQ9UJ70 344 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 ABCA12Q86UK0 2595 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 CHD6Q8TD26 2715 aa4.21□□□□□ -1.74
NEK3-211ENST00000629912 MXRA5Q9NR99 2828 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms