RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 GAGE6Q13070 117 aa9.46□□□□□ -0.89
SHPRH-211ENST00000629427 UBE2CO00762 179 aa9.46□□□□□ -0.89
SHPRH-211ENST00000629427 IGF2BP2-AS1Q96M15 143 aa9.46□□□□□ -0.89
SHPRH-211ENST00000629427 TRAV1-1A0A0B4J248 108 aa9.46□□□□□ -0.9
SHPRH-211ENST00000629427 TMEM75Q8N9X5 138 aa9.46□□□□□ -0.9
SHPRH-211ENST00000629427 IGHV3-38A0A0C4DH36 116 aa9.46□□□□□ -0.9
SHPRH-211ENST00000629427 CLPSL2Q6UWE3 100 aa9.46□□□□□ -0.9
SHPRH-211ENST00000629427 FNDC10F2Z333 226 aa9.45□□□□□ -0.9
SHPRH-211ENST00000629427 SYS1-DBNDD2H3BUS1 97 aa9.45□□□□□ -0.9
SHPRH-211ENST00000629427 I3L3M4 83 aa9.45□□□□□ -0.9
SHPRH-211ENST00000629427 NDUFB8O95169 186 aa9.45□□□□□ -0.9
SHPRH-211ENST00000629427 TRAV25A0A0B4J276 109 aa9.45□□□□□ -0.9
SHPRH-211ENST00000629427 VWC2Q2TAL6 325 aa9.45□□□□□ -0.9
SHPRH-211ENST00000629427 TMEM243Q9BU79 118 aa9.45□□□□□ -0.9
SHPRH-211ENST00000629427 TP53TG1Q9Y2A0 90 aa9.45□□□□□ -0.9
SHPRH-211ENST00000629427 OBSL1O75147 1896 aa9.45□□□□□ -0.9
SHPRH-211ENST00000629427 HIST3H2BBQ8N257 126 aa9.45□□□□□ -0.9
SHPRH-211ENST00000629427 TRBV24-1A0A075B6N3 115 aa9.45□□□□□ -0.9
SHPRH-211ENST00000629427 RHODO00212 210 aa9.45□□□□□ -0.9
SHPRH-211ENST00000629427 Q86TA4 180 aa9.45□□□□□ -0.9
SHPRH-211ENST00000629427 TMEM256Q8N2U0 113 aa9.44□□□□□ -0.9
SHPRH-211ENST00000629427 ZNRF2Q8NHG8 242 aa9.44□□□□□ -0.9
SHPRH-211ENST00000629427 CEP192Q8TEP8 1941 aa9.44□□□□□ -0.9
SHPRH-211ENST00000629427 C8orf86Q6ZUL3 223 aa9.44□□□□□ -0.9
SHPRH-211ENST00000629427 J3QLI3 93 aa9.44□□□□□ -0.9
SHPRH-211ENST00000629427 ANXA2RQ3ZCQ2 193 aa9.44□□□□□ -0.9
SHPRH-211ENST00000629427 CITED2Q99967 270 aaPredicted RBP9.44□□□□□ -0.9
SHPRH-211ENST00000629427 CACNA1HO95180 2353 aa9.44□□□□□ -0.9
SHPRH-211ENST00000629427 A0A0G2JRQ6 117 aa9.44□□□□□ -0.9
SHPRH-211ENST00000629427 ZC2HC1BQ5TFG8 222 aa9.44□□□□□ -0.9
SHPRH-211ENST00000629427 RMI2Q96E14 147 aa9.44□□□□□ -0.9
SHPRH-211ENST00000629427 C9JAW5 83 aa9.44□□□□□ -0.9
SHPRH-211ENST00000629427 ANGP03950 147 aaKnown RBP9.44□□□□□ -0.9
SHPRH-211ENST00000629427 TMEM14BQ9NUH8 114 aa9.44□□□□□ -0.9
SHPRH-211ENST00000629427 KIAA1549Q9HCM3 1950 aa9.43□□□□□ -0.9
SHPRH-211ENST00000629427 LOC105371267A0A1B0GV96 52 aa9.43□□□□□ -0.9
SHPRH-211ENST00000629427 HS3ST6Q96QI5 342 aa9.43□□□□□ -0.9
SHPRH-211ENST00000629427 CYTL1Q9NRR1 136 aa9.43□□□□□ -0.9
SHPRH-211ENST00000629427 MED12LQ86YW9 2145 aa9.43□□□□□ -0.9
SHPRH-211ENST00000629427 C22orf46C9J442 243 aa9.43□□□□□ -0.9
SHPRH-211ENST00000629427 CDKN1BP46527 198 aa9.43□□□□□ -0.9
SHPRH-211ENST00000629427 MED13LQ71F56 2210 aa9.43□□□□□ -0.9
SHPRH-211ENST00000629427 A0A1B0GW64 132 aa9.43□□□□□ -0.9
SHPRH-211ENST00000629427 TMEM213A2RRL7 107 aa9.43□□□□□ -0.9
SHPRH-211ENST00000629427 IGHV1OR15-1A0A075B7D0 117 aa9.42□□□□□ -0.9
SHPRH-211ENST00000629427 QRFPP83859 136 aa9.42□□□□□ -0.9
SHPRH-211ENST00000629427 LY96Q9Y6Y9 160 aa9.42□□□□□ -0.9
SHPRH-211ENST00000629427 NCOA6Q14686 2063 aaPredicted RBP9.42□□□□□ -0.9
SHPRH-211ENST00000629427 KIR3DS1Q14943 382 aa9.42□□□□□ -0.9
SHPRH-211ENST00000629427 TEX36Q5VZQ5 186 aa9.42□□□□□ -0.9
SHPRH-211ENST00000629427 CHAC1Q9BUX1 264 aa9.42□□□□□ -0.9
SHPRH-211ENST00000629427 REG4Q9BYZ8 158 aa9.42□□□□□ -0.9
SHPRH-211ENST00000629427 DKK4Q9UBT3 224 aa9.42□□□□□ -0.9
SHPRH-211ENST00000629427 NXPH4O95158 308 aa9.42□□□□□ -0.9
SHPRH-211ENST00000629427 PFN1P07737 140 aaKnown RBP9.41□□□□□ -0.9
SHPRH-211ENST00000629427 KLF5Q13887 457 aaPredicted RBP9.41□□□□□ -0.9
SHPRH-211ENST00000629427 ZNF833PQ6ZTB9 187 aa9.41□□□□□ -0.9
SHPRH-211ENST00000629427 MMP23AO75900 390 aa9.41□□□□□ -0.9
SHPRH-211ENST00000629427 GFRA4Q9GZZ7 299 aa9.41□□□□□ -0.9
SHPRH-211ENST00000629427 C3orf79P0CE67 100 aa9.41□□□□□ -0.9
SHPRH-211ENST00000629427 NDUFA4O00483 81 aa9.41□□□□□ -0.9
SHPRH-211ENST00000629427 HLA-DRB4P13762 266 aa9.41□□□□□ -0.9
SHPRH-211ENST00000629427 FREM1Q5H8C1 2179 aa9.41□□□□□ -0.9
SHPRH-211ENST00000629427 Q6ZRM9 215 aa9.41□□□□□ -0.9
SHPRH-211ENST00000629427 STPG4Q8N801 248 aa9.41□□□□□ -0.9
SHPRH-211ENST00000629427 NDUFA4L2Q9NRX3 87 aa9.41□□□□□ -0.9
SHPRH-211ENST00000629427 HLA-DRB4X5D2U9 266 aa9.41□□□□□ -0.9
SHPRH-211ENST00000629427 ZNF106Q9H2Y7 1883 aaKnown RBP9.41□□□□□ -0.9
SHPRH-211ENST00000629427 TAL2Q16559 108 aa9.41□□□□□ -0.9
SHPRH-211ENST00000629427 MALRD1Q5VYJ5 2156 aa9.41□□□□□ -0.9
SHPRH-211ENST00000629427 TNRC6AQ8NDV7 1962 aaKnown RBP9.41□□□□□ -0.9
SHPRH-211ENST00000629427 TRAV26-2A0A0B4J265 109 aa9.41□□□□□ -0.9
SHPRH-211ENST00000629427 DUX4L9Q6RFH8 374 aaPredicted RBP9.41□□□□□ -0.9
SHPRH-211ENST00000629427 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.4□□□□□ -0.9
SHPRH-211ENST00000629427 YPEL3P61236 119 aaPredicted RBP9.4□□□□□ -0.9
SHPRH-211ENST00000629427 TMEM141Q96I45 108 aa9.4□□□□□ -0.9
SHPRH-211ENST00000629427 MRPL27Q9P0M9 148 aaKnown RBP9.4□□□□□ -0.9
SHPRH-211ENST00000629427 TSSC4Q9Y5U2 329 aaPredicted RBP9.4□□□□□ -0.9
SHPRH-211ENST00000629427 SCRT2Q9NQ03 307 aa9.4□□□□□ -0.9
SHPRH-211ENST00000629427 IGKV1-39P01597 117 aa9.4□□□□□ -0.91
SHPRH-211ENST00000629427 IGKV1D-39P04432 117 aa9.4□□□□□ -0.91
SHPRH-211ENST00000629427 Q6ZS49 121 aa9.4□□□□□ -0.91
SHPRH-211ENST00000629427 DSCR8Q96T75 97 aa9.4□□□□□ -0.91
SHPRH-211ENST00000629427 C17orf58Q2M2W7 97 aa9.39□□□□□ -0.91
SHPRH-211ENST00000629427 FAM120AOSQ5T036 256 aa9.39□□□□□ -0.91
SHPRH-211ENST00000629427 H3BMM0 161 aa9.39□□□□□ -0.91
SHPRH-211ENST00000629427 SOCS3O14543 225 aa9.39□□□□□ -0.91
SHPRH-211ENST00000629427 PRSS29PA6NIE9 313 aa9.39□□□□□ -0.91
SHPRH-211ENST00000629427 IGKV2D-24A0A075B6R9 120 aa9.39□□□□□ -0.91
SHPRH-211ENST00000629427 PRSS46E5RG02 174 aa9.39□□□□□ -0.91
SHPRH-211ENST00000629427 CCL24O00175 119 aa9.39□□□□□ -0.91
SHPRH-211ENST00000629427 TCF15Q12870 199 aa9.39□□□□□ -0.91
SHPRH-211ENST00000629427 COLCA2A8K830 154 aa9.39□□□□□ -0.91
SHPRH-211ENST00000629427 UBE2WQ96B02 151 aa9.39□□□□□ -0.91
SHPRH-211ENST00000629427 CD5LO43866 347 aa9.39□□□□□ -0.91
SHPRH-211ENST00000629427 C1orf194Q5T5A4 169 aa9.38□□□□□ -0.91
SHPRH-211ENST00000629427 Q9HAA7 133 aa9.38□□□□□ -0.91
SHPRH-211ENST00000629427 IGKV1OR2-108A0A075B7D4 117 aa9.38□□□□□ -0.91
SHPRH-211ENST00000629427 UBE2BP63146 152 aa9.38□□□□□ -0.91
SHPRH-211ENST00000629427 MPV17L2Q567V2 206 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 371.2 ms