RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 C14orf178Q8N769 122 aaPredicted RBP11.64□□□□□ -0.55
VPS36-207ENST00000611132 MEIG1Q5JSS6 88 aa11.63□□□□□ -0.55
VPS36-207ENST00000611132 NPFFR1Q9GZQ6 430 aa11.63□□□□□ -0.55
VPS36-207ENST00000611132 TRAV8-4A0A0B4J246 113 aa11.63□□□□□ -0.55
VPS36-207ENST00000611132 A0A1B0GXF2 115 aa11.63□□□□□ -0.55
VPS36-207ENST00000611132 KLRD1Q13241 179 aa11.63□□□□□ -0.55
VPS36-207ENST00000611132 EIF4EBP1Q13541 118 aaPredicted RBP11.63□□□□□ -0.55
VPS36-207ENST00000611132 GDF5OSQ5U4N7 250 aa11.63□□□□□ -0.55
VPS36-207ENST00000611132 ABHD17AQ96GS6 310 aa11.63□□□□□ -0.55
VPS36-207ENST00000611132 RNF114Q9Y508 228 aa11.63□□□□□ -0.55
VPS36-207ENST00000611132 LHBP01229 141 aa11.63□□□□□ -0.55
VPS36-207ENST00000611132 NOTCH3Q9UM47 2321 aa11.63□□□□□ -0.55
VPS36-207ENST00000611132 C22orf46C9J442 243 aa11.63□□□□□ -0.55
VPS36-207ENST00000611132 SRSF6Q13247 344 aaKnown RBP11.63□□□□□ -0.55
VPS36-207ENST00000611132 ZNF491Q8N8L2 437 aa11.62□□□□□ -0.55
VPS36-207ENST00000611132 TNFRSF18Q9Y5U5 241 aa11.62□□□□□ -0.55
VPS36-207ENST00000611132 IGHV3OR16-10A0A075B7F0 116 aa11.62□□□□□ -0.55
VPS36-207ENST00000611132 PAX8Q06710 450 aa11.62□□□□□ -0.55
VPS36-207ENST00000611132 DAZAP2Q15038 168 aaPredicted RBP11.62□□□□□ -0.55
VPS36-207ENST00000611132 MYMXA0A1B0GTQ4 84 aa11.62□□□□□ -0.55
VPS36-207ENST00000611132 C12orf74Q32Q52 190 aa11.62□□□□□ -0.55
VPS36-207ENST00000611132 SPRNQ5BIV9 151 aa11.62□□□□□ -0.55
VPS36-207ENST00000611132 IGHV3-11P01762 117 aa11.61□□□□□ -0.55
VPS36-207ENST00000611132 C9orf139Q6ZV77 190 aa11.61□□□□□ -0.55
VPS36-207ENST00000611132 BOD1L2Q8IYS8 172 aa11.61□□□□□ -0.55
VPS36-207ENST00000611132 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.61□□□□□ -0.55
VPS36-207ENST00000611132 C19orf54Q5BKX5 351 aa11.61□□□□□ -0.55
VPS36-207ENST00000611132 DTX2Q86UW9 622 aa11.61□□□□□ -0.55
VPS36-207ENST00000611132 TNRC6AQ8NDV7 1962 aaKnown RBP11.61□□□□□ -0.55
VPS36-207ENST00000611132 F8VRH5 84 aa11.61□□□□□ -0.55
VPS36-207ENST00000611132 MBD6Q96DN6 1003 aa11.61□□□□□ -0.55
VPS36-207ENST00000611132 TRBV25-1A0A075B6N4 114 aa11.61□□□□□ -0.55
VPS36-207ENST00000611132 OOSP1A8MZH6 123 aa11.61□□□□□ -0.55
VPS36-207ENST00000611132 VMO1Q7Z5L0 202 aa11.61□□□□□ -0.55
VPS36-207ENST00000611132 PPDPFLQ8WWR9 84 aa11.61□□□□□ -0.55
VPS36-207ENST00000611132 LINC00310P59036 64 aa11.6□□□□□ -0.55
VPS36-207ENST00000611132 CR1LQ2VPA4 569 aa11.6□□□□□ -0.55
VPS36-207ENST00000611132 C2orf66Q6UXQ4 117 aa11.6□□□□□ -0.55
VPS36-207ENST00000611132 IGHV3-64A0A075B6Q5 118 aa11.6□□□□□ -0.55
VPS36-207ENST00000611132 LINC00477Q96M19 166 aa11.6□□□□□ -0.55
VPS36-207ENST00000611132 WDR87Q6ZQQ6 2873 aa11.6□□□□□ -0.55
VPS36-207ENST00000611132 C19orf71A6NCJ1 209 aa11.6□□□□□ -0.55
VPS36-207ENST00000611132 CRXO43186 299 aaPredicted RBP11.6□□□□□ -0.55
VPS36-207ENST00000611132 SUMO2P61956 95 aaKnown RBP11.6□□□□□ -0.55
VPS36-207ENST00000611132 RNF182Q8N6D2 247 aa11.6□□□□□ -0.55
VPS36-207ENST00000611132 TRBV20-1A0A075B6N2 111 aa11.59□□□□□ -0.55
VPS36-207ENST00000611132 NPFFO15130 113 aa11.59□□□□□ -0.55
VPS36-207ENST00000611132 SLC25A16P16260 332 aa11.59□□□□□ -0.55
VPS36-207ENST00000611132 IL17RELQ6ZVW7 336 aa11.59□□□□□ -0.55
VPS36-207ENST00000611132 A0A0G2JNJ9 132 aa11.59□□□□□ -0.55
VPS36-207ENST00000611132 VCYO14598 125 aa11.59□□□□□ -0.55
VPS36-207ENST00000611132 EGR2P11161 476 aaPredicted RBP11.59□□□□□ -0.55
VPS36-207ENST00000611132 Q9UFV3 132 aa11.59□□□□□ -0.55
VPS36-207ENST00000611132 C9JAW5 83 aa11.59□□□□□ -0.55
VPS36-207ENST00000611132 SCGB1A1P11684 91 aa11.59□□□□□ -0.55
VPS36-207ENST00000611132 DEFB104AQ8WTQ1 72 aa11.59□□□□□ -0.55
VPS36-207ENST00000611132 MRPL36Q9P0J6 103 aaKnown RBP11.59□□□□□ -0.55
VPS36-207ENST00000611132 TP73-AS1Q9UF72 201 aa11.59□□□□□ -0.55
VPS36-207ENST00000611132 COL6A6A6NMZ7 2263 aa11.59□□□□□ -0.55
VPS36-207ENST00000611132 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.558e-10■■■■■ 38.5
VPS36-207ENST00000611132 INS-IGF2F8WCM5 200 aa11.59□□□□□ -0.55
VPS36-207ENST00000611132 G3V4G9 280 aa11.59□□□□□ -0.55
VPS36-207ENST00000611132 EFNA4P52798 201 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 SPATA12Q7Z6I5 190 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 C8orf31Q8N9H6 132 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 NDPQ00604 133 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 MINOS1Q5TGZ0 78 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 DYNLRB2Q8TF09 96 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 RAX2Q96IS3 184 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 PRADC1Q9BSG0 188 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 MINOS1-NBL1R4GNA1 71 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 DNAL4O96015 105 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 FXYD2P54710 66 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 PRSS22Q9GZN4 317 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 ATG2AQ2TAZ0 1938 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 TRAV26-2A0A0B4J265 109 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 SHISA9B4DS77 424 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 HLA-DRB4P13762 266 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 SH2D6Q7Z4S9 175 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 HLA-DRB4X5D2U9 266 aa11.58□□□□□ -0.56
VPS36-207ENST00000611132 A0A087WX48 190 aa11.57□□□□□ -0.56
VPS36-207ENST00000611132 E7EUB6 86 aa11.57□□□□□ -0.56
VPS36-207ENST00000611132 COL8A2P25067 703 aa11.57□□□□□ -0.56
VPS36-207ENST00000611132 KLRB1Q12918 225 aa11.57□□□□□ -0.56
VPS36-207ENST00000611132 RRN3P1Q2M238 152 aa11.57□□□□□ -0.56
VPS36-207ENST00000611132 SP5Q6BEB4 398 aaPredicted RBP11.57□□□□□ -0.56
VPS36-207ENST00000611132 PLEKHB2Q96CS7 222 aa11.57□□□□□ -0.56
VPS36-207ENST00000611132 SMIM2Q9BVW6 85 aa11.57□□□□□ -0.56
VPS36-207ENST00000611132 HCFC1P51610 2035 aa11.57□□□□□ -0.56
VPS36-207ENST00000611132 IGLL5B9A064 214 aa11.57□□□□□ -0.56
VPS36-207ENST00000611132 Q6ZS92 163 aa11.57□□□□□ -0.56
VPS36-207ENST00000611132 M0R1W7 72 aa11.57□□□□□ -0.56
VPS36-207ENST00000611132 IGKV1-17P01599 117 aa11.57□□□□□ -0.56
VPS36-207ENST00000611132 ZGRF1Q86YA3 2104 aa11.57□□□□□ -0.56
VPS36-207ENST00000611132 ATXN8Q156A1 80 aa11.56□□□□□ -0.56
VPS36-207ENST00000611132 CLEC2AQ6UVW9 174 aa11.56□□□□□ -0.56
VPS36-207ENST00000611132 LINC00322Q6ZN03 302 aaPredicted RBP11.56□□□□□ -0.56
VPS36-207ENST00000611132 LINC00527Q9UJ94 153 aa11.56□□□□□ -0.56
VPS36-207ENST00000611132 DOPEY2Q9Y3R5 2298 aa11.56□□□□□ -0.56
VPS36-207ENST00000611132 PLXNB1O43157 2135 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms