RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 PRR20DP86480 221 aa12.59□□□□□ -0.39
RTN1-209ENST00000611068 PRR20BP86481 221 aa12.59□□□□□ -0.39
RTN1-209ENST00000611068 PRR20AP86496 221 aa12.59□□□□□ -0.39
RTN1-209ENST00000611068 NABP2Q9BQ15 211 aa12.59□□□□□ -0.39
RTN1-209ENST00000611068 TPSG1Q9NRR2 321 aa12.59□□□□□ -0.39
RTN1-209ENST00000611068 LOXL1Q08397 574 aaPredicted RBP12.58□□□□□ -0.39
RTN1-209ENST00000611068 CCL19Q99731 98 aa12.58□□□□□ -0.39
RTN1-209ENST00000611068 AP5S1Q9NUS5 200 aa12.58□□□□□ -0.39
RTN1-209ENST00000611068 TENM4Q6N022 2769 aa12.58□□□□□ -0.4
RTN1-209ENST00000611068 C10orf55Q5SWW7 151 aa12.58□□□□□ -0.4
RTN1-209ENST00000611068 LINC00322Q6ZN03 302 aaPredicted RBP12.58□□□□□ -0.4
RTN1-209ENST00000611068 NFE4Q86UQ8 179 aa12.58□□□□□ -0.4
RTN1-209ENST00000611068 FLYWCH2Q96CP2 140 aaKnown RBP12.58□□□□□ -0.4
RTN1-209ENST00000611068 C7orf69Q9H7B7 122 aa12.58□□□□□ -0.4
RTN1-209ENST00000611068 TCRBV4S1A1TA0A5B7 111 aa12.58□□□□□ -0.4
RTN1-209ENST00000611068 KIR2DS2P43631 304 aa12.58□□□□□ -0.4
RTN1-209ENST00000611068 FXYD7P58549 80 aa12.58□□□□□ -0.4
RTN1-209ENST00000611068 ZNF502Q8TBZ5 544 aa12.58□□□□□ -0.4
RTN1-209ENST00000611068 TCF19Q9Y242 345 aa12.58□□□□□ -0.4
RTN1-209ENST00000611068 USP9YO00507 2555 aaPredicted RBP12.57□□□□□ -0.4
RTN1-209ENST00000611068 A0A096LNJ9 63 aa12.57□□□□□ -0.4
RTN1-209ENST00000611068 E7EUB6 86 aa12.57□□□□□ -0.4
RTN1-209ENST00000611068 PRELID3AQ96N28 172 aa12.57□□□□□ -0.4
RTN1-209ENST00000611068 PTPN13Q12923 2485 aa12.57□□□□□ -0.4
RTN1-209ENST00000611068 MORN5Q5VZ52 161 aa12.57□□□□□ -0.4
RTN1-209ENST00000611068 AMMECR1Q9Y4X0 333 aaPredicted RBP12.57□□□□□ -0.4
RTN1-209ENST00000611068 TRAV5A0A0B4J249 113 aa12.56□□□□□ -0.4
RTN1-209ENST00000611068 NPIPB6E9PJ23 425 aa12.56□□□□□ -0.4
RTN1-209ENST00000611068 BUB1B-PAK6H3BSN5 160 aa12.56□□□□□ -0.4
RTN1-209ENST00000611068 CCDC179H3BU77 68 aa12.56□□□□□ -0.4
RTN1-209ENST00000611068 Q6AWC8 147 aa12.56□□□□□ -0.4
RTN1-209ENST00000611068 OR5AN1Q8NGI8 311 aa12.56□□□□□ -0.4
RTN1-209ENST00000611068 ABCA1O95477 2261 aa12.56□□□□□ -0.4
RTN1-209ENST00000611068 C15orf61A6NNL5 157 aa12.56□□□□□ -0.4
RTN1-209ENST00000611068 IGLV1-47P01700 117 aa12.56□□□□□ -0.4
RTN1-209ENST00000611068 IGKV2D-26A0A0A0MRZ7 120 aa12.55□□□□□ -0.4
RTN1-209ENST00000611068 ARL3P36405 182 aa12.55□□□□□ -0.4
RTN1-209ENST00000611068 TMEM30BQ3MIR4 351 aa12.55□□□□□ -0.4
RTN1-209ENST00000611068 RPEQ96AT9 228 aa12.55□□□□□ -0.4
RTN1-209ENST00000611068 CHAC1Q9BUX1 264 aa12.55□□□□□ -0.4
RTN1-209ENST00000611068 OVOL3O00110 214 aa12.55□□□□□ -0.4
RTN1-209ENST00000611068 GNG5P63218 68 aa12.55□□□□□ -0.4
RTN1-209ENST00000611068 LY6G5BQ8NDX9 201 aa12.55□□□□□ -0.4
RTN1-209ENST00000611068 CSN1S1P47710 185 aa12.54□□□□□ -0.4
RTN1-209ENST00000611068 ATP5J2P56134 94 aa12.54□□□□□ -0.4
RTN1-209ENST00000611068 VMO1Q7Z5L0 202 aa12.54□□□□□ -0.4
RTN1-209ENST00000611068 NAV3Q8IVL0 2385 aa12.54□□□□□ -0.4
RTN1-209ENST00000611068 IGHV3OR16-10A0A075B7F0 116 aa12.54□□□□□ -0.4
RTN1-209ENST00000611068 IGHV1-3A0A0C4DH29 117 aa12.54□□□□□ -0.4
RTN1-209ENST00000611068 NPIPB5A8MRT5 1133 aa12.54□□□□□ -0.4
RTN1-209ENST00000611068 UPK2O00526 184 aa12.54□□□□□ -0.4
RTN1-209ENST00000611068 IGHV3-48P01763 117 aa12.54□□□□□ -0.4
RTN1-209ENST00000611068 SMCPP49901 116 aaPredicted RBP12.54□□□□□ -0.4
RTN1-209ENST00000611068 MLANAQ16655 118 aa12.54□□□□□ -0.4
RTN1-209ENST00000611068 CITED1Q99966 193 aa12.54□□□□□ -0.4
RTN1-209ENST00000611068 TMEM14BQ9NUH8 114 aa12.54□□□□□ -0.4
RTN1-209ENST00000611068 ZANQ9Y493 2812 aa12.53□□□□□ -0.4
RTN1-209ENST00000611068 LGALS9BQ3B8N2 356 aa12.53□□□□□ -0.4
RTN1-209ENST00000611068 LGALS9CQ6DKI2 356 aa12.53□□□□□ -0.4
RTN1-209ENST00000611068 ZNF562Q6V9R5 426 aa12.53□□□□□ -0.4
RTN1-209ENST00000611068 LINC00311Q8N616 119 aa12.53□□□□□ -0.4
RTN1-209ENST00000611068 OR4C13Q8NGP0 309 aa12.53□□□□□ -0.4
RTN1-209ENST00000611068 YAE1D1Q9NRH1 226 aa12.53□□□□□ -0.4
RTN1-209ENST00000611068 FAM90A9PA6NNJ1 464 aa12.53□□□□□ -0.4
RTN1-209ENST00000611068 PEX7O00628 323 aa12.53□□□□□ -0.4
RTN1-209ENST00000611068 PRTN3P24158 256 aa12.53□□□□□ -0.4
RTN1-209ENST00000611068 HSPE1P61604 102 aaKnown RBP12.53□□□□□ -0.4
RTN1-209ENST00000611068 C8orf46Q8TAG6 207 aa12.53□□□□□ -0.4
RTN1-209ENST00000611068 RPP21Q9H633 154 aaKnown RBP12.53□□□□□ -0.4
RTN1-209ENST00000611068 ENY2Q9NPA8 101 aa12.53□□□□□ -0.4
RTN1-209ENST00000611068 ANKRD17O75179 2603 aaKnown RBP12.52□□□□□ -0.4
RTN1-209ENST00000611068 IGKV1OR2-108A0A075B7D4 117 aa12.52□□□□□ -0.4
RTN1-209ENST00000611068 LINC01548A6NM66 108 aa12.52□□□□□ -0.4
RTN1-209ENST00000611068 UBE2L3P68036 154 aaKnown RBP12.52□□□□□ -0.4
RTN1-209ENST00000611068 HIST2H2BCQ6DN03 193 aa12.52□□□□□ -0.4
RTN1-209ENST00000611068 PRSS3P2Q8NHM4 247 aa12.52□□□□□ -0.4
RTN1-209ENST00000611068 DKK2Q9UBU2 259 aa12.52□□□□□ -0.4
RTN1-209ENST00000611068 TIMM23O14925 209 aa12.52□□□□□ -0.41
RTN1-209ENST00000611068 RBP4P02753 201 aa12.52□□□□□ -0.41
RTN1-209ENST00000611068 PYYP10082 97 aa12.52□□□□□ -0.41
RTN1-209ENST00000611068 LMO4P61968 165 aa12.52□□□□□ -0.41
RTN1-209ENST00000611068 LCNL1Q6ZST4 164 aa12.52□□□□□ -0.41
RTN1-209ENST00000611068 KIR2DL4Q99706 377 aa12.52□□□□□ -0.41
RTN1-209ENST00000611068 NBPF19A0A087WUL8 3843 aa12.52□□□□□ -0.41
RTN1-209ENST00000611068 DOPEY2Q9Y3R5 2298 aa12.51□□□□□ -0.41
RTN1-209ENST00000611068 TRBV20-1A0A075B6N2 111 aa12.51□□□□□ -0.41
RTN1-209ENST00000611068 FSTL3O95633 263 aa12.51□□□□□ -0.41
RTN1-209ENST00000611068 IGLV2-23P01705 113 aa12.51□□□□□ -0.41
RTN1-209ENST00000611068 IFI27P40305 119 aaPredicted RBP12.51□□□□□ -0.41
RTN1-209ENST00000611068 ZFAND6Q6FIF0 208 aa12.51□□□□□ -0.41
RTN1-209ENST00000611068 HCP5Q6MZN7 132 aa12.51□□□□□ -0.41
RTN1-209ENST00000611068 PTH2Q96A98 100 aa12.51□□□□□ -0.41
RTN1-209ENST00000611068 FOXA2Q9Y261 457 aaPredicted RBP12.51□□□□□ -0.41
RTN1-209ENST00000611068 IGHV4-61A0A0C4DH41 118 aa12.51□□□□□ -0.41
RTN1-209ENST00000611068 ZNF329Q86UD4 541 aa12.51□□□□□ -0.41
RTN1-209ENST00000611068 WFDC3Q8IUB2 231 aa12.51□□□□□ -0.41
RTN1-209ENST00000611068 CEND1Q8N111 149 aa12.51□□□□□ -0.41
RTN1-209ENST00000611068 DYNAPQ8N1N2 210 aa12.51□□□□□ -0.41
RTN1-209ENST00000611068 ABCA2Q9BZC7 2435 aa12.5□□□□□ -0.41
RTN1-209ENST00000611068 A0A087WX48 190 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms