RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 FOXI2Q6ZQN5 318 aa9.61□□□□□ -0.87
CTSA-213ENST00000606782 ARL6IP6Q8N6S5 226 aa9.61□□□□□ -0.87
CTSA-213ENST00000606782 ZNF680Q8NEM1 530 aa9.61□□□□□ -0.87
CTSA-213ENST00000606782 RPUSD4Q96CM3 377 aaKnown RBP9.61□□□□□ -0.87
CTSA-213ENST00000606782 NEU1Q99519 415 aa9.61□□□□□ -0.87
CTSA-213ENST00000606782 Q9H3A6 140 aa9.61□□□□□ -0.87
CTSA-213ENST00000606782 OTORQ9NRC9 128 aa9.61□□□□□ -0.87
CTSA-213ENST00000606782 FRAS1Q86XX4 4008 aa9.6□□□□□ -0.87
CTSA-213ENST00000606782 A0A0J9YX75 114 aa9.6□□□□□ -0.87
CTSA-213ENST00000606782 A0A1W2PRE2 83 aa9.6□□□□□ -0.87
CTSA-213ENST00000606782 PRAC2D3DTV9 90 aa9.6□□□□□ -0.87
CTSA-213ENST00000606782 BLOC1S1P78537 153 aa9.6□□□□□ -0.87
CTSA-213ENST00000606782 GDF5OSQ5U4N7 250 aa9.6□□□□□ -0.87
CTSA-213ENST00000606782 ZNF738Q8NE65 137 aa9.6□□□□□ -0.87
CTSA-213ENST00000606782 LYPD6BQ8NI32 183 aa9.6□□□□□ -0.87
CTSA-213ENST00000606782 AAMDCQ9H7C9 122 aa9.6□□□□□ -0.87
CTSA-213ENST00000606782 XCL2Q9UBD3 114 aa9.6□□□□□ -0.87
CTSA-213ENST00000606782 TRAV10A0A0B4J240 114 aa9.59□□□□□ -0.87
CTSA-213ENST00000606782 A8MTW9 85 aa9.59□□□□□ -0.87
CTSA-213ENST00000606782 F6UB75 175 aa9.59□□□□□ -0.87
CTSA-213ENST00000606782 M0R3E3 92 aa9.59□□□□□ -0.87
CTSA-213ENST00000606782 IFNA7P01567 189 aa9.59□□□□□ -0.87
CTSA-213ENST00000606782 HBE1P02100 147 aa9.59□□□□□ -0.87
CTSA-213ENST00000606782 ZNF705DP0CH99 300 aaPredicted RBP9.59□□□□□ -0.87
CTSA-213ENST00000606782 ZNF705BP0CI00 300 aaPredicted RBP9.59□□□□□ -0.87
CTSA-213ENST00000606782 EBLN2Q6P2I7 272 aa9.59□□□□□ -0.87
CTSA-213ENST00000606782 Q6ZTC4 211 aa9.59□□□□□ -0.87
CTSA-213ENST00000606782 RXFP4Q8TDU9 374 aa9.59□□□□□ -0.87
CTSA-213ENST00000606782 NKX6-2Q9C056 277 aaPredicted RBP9.59□□□□□ -0.87
CTSA-213ENST00000606782 SMIM9A6NGZ8 99 aa9.58□□□□□ -0.88
CTSA-213ENST00000606782 FAM74A7A6NL05 159 aa9.58□□□□□ -0.88
CTSA-213ENST00000606782 IGLL5B9A064 214 aa9.58□□□□□ -0.88
CTSA-213ENST00000606782 TEX46H3BTG2 121 aa9.58□□□□□ -0.88
CTSA-213ENST00000606782 DUSP14O95147 198 aaKnown RBP9.58□□□□□ -0.88
CTSA-213ENST00000606782 PPT1P50897 306 aa9.58□□□□□ -0.88
CTSA-213ENST00000606782 SUMO1P63165 101 aaKnown RBP9.58□□□□□ -0.88
CTSA-213ENST00000606782 C12orf74Q32Q52 190 aa9.58□□□□□ -0.88
CTSA-213ENST00000606782 IQCF2Q8IXL9 164 aa9.58□□□□□ -0.88
CTSA-213ENST00000606782 OR8A1Q8NGG7 326 aa9.58□□□□□ -0.88
CTSA-213ENST00000606782 YTHDF2Q9Y5A9 579 aaKnown RBP9.58□□□□□ -0.88
CTSA-213ENST00000606782 ARL2-SNX15V9GYD0 113 aa9.58□□□□□ -0.88
CTSA-213ENST00000606782 VPS13DQ5THJ4 4388 aa9.58□□□□□ -0.88
CTSA-213ENST00000606782 DNAH6Q9C0G6 4158 aa9.58□□□□□ -0.88
CTSA-213ENST00000606782 A0A1B0GV50 99 aa9.57□□□□□ -0.88
CTSA-213ENST00000606782 IFITM2Q01629 132 aa9.57□□□□□ -0.88
CTSA-213ENST00000606782 CCDC28AQ8IWP9 274 aa9.57□□□□□ -0.88
CTSA-213ENST00000606782 CELA1Q9UNI1 258 aa9.57□□□□□ -0.88
CTSA-213ENST00000606782 IGHV4-4A0A075B6R2 117 aa9.56□□□□□ -0.88
CTSA-213ENST00000606782 TMEM189A5PLL7 270 aa9.56□□□□□ -0.88
CTSA-213ENST00000606782 GGTLC3B5MD39 225 aa9.56□□□□□ -0.88
CTSA-213ENST00000606782 DIRC3C9JPN6 131 aa9.56□□□□□ -0.88
CTSA-213ENST00000606782 PAGE4O60829 102 aa9.56□□□□□ -0.88
CTSA-213ENST00000606782 CSN1S1P47710 185 aa9.56□□□□□ -0.88
CTSA-213ENST00000606782 CNN1P51911 297 aaKnown RBP9.56□□□□□ -0.88
CTSA-213ENST00000606782 UBE2G2P60604 165 aa9.56□□□□□ -0.88
CTSA-213ENST00000606782 LINC00477Q96M19 166 aa9.56□□□□□ -0.88
CTSA-213ENST00000606782 EPDR1Q9UM22 224 aa9.56□□□□□ -0.88
CTSA-213ENST00000606782 DNAH10Q8IVF4 4471 aa9.56□□□□□ -0.88
CTSA-213ENST00000606782 RBAKDNA6NC62 111 aa9.55□□□□□ -0.88
CTSA-213ENST00000606782 NPIPB6E9PJ23 425 aa9.55□□□□□ -0.88
CTSA-213ENST00000606782 AMBPP02760 352 aa9.55□□□□□ -0.88
CTSA-213ENST00000606782 SLC25A5P05141 298 aaKnown RBP9.55□□□□□ -0.88
CTSA-213ENST00000606782 PRB4P10163 310 aaPredicted RBP9.55□□□□□ -0.88
CTSA-213ENST00000606782 AMTNQ6UX39 209 aa9.55□□□□□ -0.88
CTSA-213ENST00000606782 C9orf47Q6ZRZ4 202 aa9.55□□□□□ -0.88
CTSA-213ENST00000606782 C5orf17Q8NAS9 161 aa9.55□□□□□ -0.88
CTSA-213ENST00000606782 OR4B1Q8NGF8 309 aa9.55□□□□□ -0.88
CTSA-213ENST00000606782 OR10J6PQ8NGY7 276 aa9.55□□□□□ -0.88
CTSA-213ENST00000606782 CMTM2Q8TAZ6 248 aa9.55□□□□□ -0.88
CTSA-213ENST00000606782 AGPAT4-IT1Q9H0P7 198 aa9.55□□□□□ -0.88
CTSA-213ENST00000606782 PPP1R14DQ9NXH3 145 aa9.55□□□□□ -0.88
CTSA-213ENST00000606782 DEFB131BA0A096LNP1 70 aa9.54□□□□□ -0.88
CTSA-213ENST00000606782 TCRAP04437 139 aa9.54□□□□□ -0.88
CTSA-213ENST00000606782 CT45A10P0DMU9 189 aa9.54□□□□□ -0.88
CTSA-213ENST00000606782 HIST1H1AQ02539 215 aaPredicted RBP9.54□□□□□ -0.88
CTSA-213ENST00000606782 ERCC8Q13216 396 aa9.54□□□□□ -0.88
CTSA-213ENST00000606782 CST9LP1Q5W188 147 aa9.54□□□□□ -0.88
CTSA-213ENST00000606782 VGLL1Q99990 258 aa9.54□□□□□ -0.88
CTSA-213ENST00000606782 MANBALQ9NQG1 85 aa9.54□□□□□ -0.88
CTSA-213ENST00000606782 IGKV2-40A0A087WW87 121 aaPredicted RBP9.53□□□□□ -0.88
CTSA-213ENST00000606782 SERTM2A0A1B0GWG4 89 aa9.53□□□□□ -0.88
CTSA-213ENST00000606782 IGKV2D-40P01614 121 aaPredicted RBP9.53□□□□□ -0.88
CTSA-213ENST00000606782 IGKV3-20P01619 116 aa9.53□□□□□ -0.88
CTSA-213ENST00000606782 NMBP08949 121 aa9.53□□□□□ -0.88
CTSA-213ENST00000606782 SPART-AS1P0CW21 52 aa9.53□□□□□ -0.88
CTSA-213ENST00000606782 ATP5G3P48201 142 aa9.53□□□□□ -0.88
CTSA-213ENST00000606782 GNG5P63218 68 aa9.53□□□□□ -0.88
CTSA-213ENST00000606782 C1orf158Q8N1D5 194 aa9.53□□□□□ -0.88
CTSA-213ENST00000606782 FAM19A4Q96LR4 140 aa9.53□□□□□ -0.88
CTSA-213ENST00000606782 TXNDC17Q9BRA2 123 aa9.53□□□□□ -0.88
CTSA-213ENST00000606782 TCEAL7Q9BRU2 100 aa9.53□□□□□ -0.88
CTSA-213ENST00000606782 SLC35B3Q9H1N7 401 aa9.53□□□□□ -0.88
CTSA-213ENST00000606782 GNG13Q9P2W3 67 aa9.53□□□□□ -0.88
CTSA-213ENST00000606782 TEX48A0A1B0GUV7 120 aa9.52□□□□□ -0.89
CTSA-213ENST00000606782 FXYD7P58549 80 aa9.52□□□□□ -0.89
CTSA-213ENST00000606782 GOLT1AQ6ZVE7 132 aa9.52□□□□□ -0.89
CTSA-213ENST00000606782 ZNF767PQ75MW2 155 aa9.52□□□□□ -0.89
CTSA-213ENST00000606782 HIST1H2BAQ96A08 127 aa9.52□□□□□ -0.89
CTSA-213ENST00000606782 ODF3Q96PU9 254 aa9.52□□□□□ -0.89
CTSA-213ENST00000606782 ZNF492Q9P255 531 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms