RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 MBD2Q9UBB5 411 aa12.73□□□□□ -0.37
CCDC12-208ENST00000603885 DNAH17Q9UFH2 4485 aa12.73□□□□□ -0.37
CCDC12-208ENST00000603885 C7orf71A4D174 169 aa12.72□□□□□ -0.37
CCDC12-208ENST00000603885 OR7C2O60412 319 aa12.72□□□□□ -0.37
CCDC12-208ENST00000603885 NUDT3O95989 172 aa12.72□□□□□ -0.37
CCDC12-208ENST00000603885 IFNA5P01569 189 aa12.72□□□□□ -0.37
CCDC12-208ENST00000603885 OR10J4P0C629 311 aa12.72□□□□□ -0.37
CCDC12-208ENST00000603885 FAM3BP58499 235 aaPredicted RBP12.72□□□□□ -0.37
CCDC12-208ENST00000603885 SCGB1C1Q8TD33 95 aa12.72□□□□□ -0.37
CCDC12-208ENST00000603885 FXYD5Q96DB9 178 aa12.72□□□□□ -0.37
CCDC12-208ENST00000603885 FAM19A4Q96LR4 140 aa12.72□□□□□ -0.37
CCDC12-208ENST00000603885 SMIM3Q9BZL3 60 aa12.72□□□□□ -0.37
CCDC12-208ENST00000603885 AGPAT4-IT1Q9H0P7 198 aa12.72□□□□□ -0.37
CCDC12-208ENST00000603885 IGKV2-40A0A087WW87 121 aaPredicted RBP12.71□□□□□ -0.37
CCDC12-208ENST00000603885 KLLNB2CW77 178 aa12.71□□□□□ -0.37
CCDC12-208ENST00000603885 IGKV2D-40P01614 121 aaPredicted RBP12.71□□□□□ -0.37
CCDC12-208ENST00000603885 FFAR4Q5NUL3 377 aa12.71□□□□□ -0.37
CCDC12-208ENST00000603885 TMEM78Q5T7P6 136 aa12.71□□□□□ -0.37
CCDC12-208ENST00000603885 C9orf47Q6ZRZ4 202 aa12.71□□□□□ -0.37
CCDC12-208ENST00000603885 LINC00612Q8N6U2 182 aa12.71□□□□□ -0.37
CCDC12-208ENST00000603885 RNF141Q8WVD5 230 aa12.71□□□□□ -0.37
CCDC12-208ENST00000603885 NACAE9PAV3 2078 aa12.71□□□□□ -0.38
CCDC12-208ENST00000603885 CRISP2P16562 243 aa12.7□□□□□ -0.38
CCDC12-208ENST00000603885 BTN1A1Q13410 526 aa12.7□□□□□ -0.38
CCDC12-208ENST00000603885 Q6ZR54 194 aa12.7□□□□□ -0.38
CCDC12-208ENST00000603885 PHYHIPLQ96FC7 376 aa12.7□□□□□ -0.38
CCDC12-208ENST00000603885 GAGE12BA1L429 117 aa12.69□□□□□ -0.38
CCDC12-208ENST00000603885 RTL8CO15255 209 aa12.69□□□□□ -0.38
CCDC12-208ENST00000603885 GAGE7O76087 117 aa12.69□□□□□ -0.38
CCDC12-208ENST00000603885 GPX1P07203 203 aa12.69□□□□□ -0.38
CCDC12-208ENST00000603885 NMBP08949 121 aa12.69□□□□□ -0.38
CCDC12-208ENST00000603885 GAGE12FP0CL80 117 aa12.69□□□□□ -0.38
CCDC12-208ENST00000603885 GAGE12GP0CL81 117 aa12.69□□□□□ -0.38
CCDC12-208ENST00000603885 GAGE12IP0CL82 117 aa12.69□□□□□ -0.38
CCDC12-208ENST00000603885 RNASE4P34096 147 aaKnown RBP12.69□□□□□ -0.38
CCDC12-208ENST00000603885 UBE2L3P68036 154 aaKnown RBP12.69□□□□□ -0.38
CCDC12-208ENST00000603885 CD300CQ08708 224 aa12.69□□□□□ -0.38
CCDC12-208ENST00000603885 DAZ2Q13117 558 aaKnown RBP12.69□□□□□ -0.38
CCDC12-208ENST00000603885 KHDC3LQ587J8 217 aa12.69□□□□□ -0.38
CCDC12-208ENST00000603885 ZNF680Q8NEM1 530 aa12.69□□□□□ -0.38
CCDC12-208ENST00000603885 VGLL1Q99990 258 aa12.69□□□□□ -0.38
CCDC12-208ENST00000603885 LINC00467Q9BRT7 94 aa12.69□□□□□ -0.38
CCDC12-208ENST00000603885 ZNF324O75467 553 aaPredicted RBP12.68□□□□□ -0.38
CCDC12-208ENST00000603885 CSN1S1P47710 185 aa12.68□□□□□ -0.38
CCDC12-208ENST00000603885 TAS2R45P59539 299 aa12.68□□□□□ -0.38
CCDC12-208ENST00000603885 OR5I1Q13606 314 aa12.68□□□□□ -0.38
CCDC12-208ENST00000603885 LYPD1Q8N2G4 141 aa12.68□□□□□ -0.38
CCDC12-208ENST00000603885 ALG5Q9Y673 324 aa12.68□□□□□ -0.38
CCDC12-208ENST00000603885 PRSS29PA6NIE9 313 aa12.67□□□□□ -0.38
CCDC12-208ENST00000603885 CCL18P55774 89 aa12.67□□□□□ -0.38
CCDC12-208ENST00000603885 RANP62826 216 aaKnown RBP12.67□□□□□ -0.38
CCDC12-208ENST00000603885 SOHLH1Q5JUK2 328 aa12.67□□□□□ -0.38
CCDC12-208ENST00000603885 EIF4E3Q8N5X7 224 aaKnown RBP12.67□□□□□ -0.38
CCDC12-208ENST00000603885 ZFAND2AQ8N6M9 145 aa12.67□□□□□ -0.38
CCDC12-208ENST00000603885 ZNF503Q96F45 646 aa12.67□□□□□ -0.38
CCDC12-208ENST00000603885 ZNF492Q9P255 531 aa12.67□□□□□ -0.38
CCDC12-208ENST00000603885 PKHD1P08F94 4074 aa12.66□□□□□ -0.38
CCDC12-208ENST00000603885 TRAV26-1A0A087WT03 109 aa12.66□□□□□ -0.38
CCDC12-208ENST00000603885 PTTG1O95997 202 aa12.66□□□□□ -0.38
CCDC12-208ENST00000603885 M6PRP20645 277 aa12.66□□□□□ -0.38
CCDC12-208ENST00000603885 ZNF138P52744 262 aa12.66□□□□□ -0.38
CCDC12-208ENST00000603885 ANXA2RQ3ZCQ2 193 aa12.66□□□□□ -0.38
CCDC12-208ENST00000603885 Q6ZTI0 123 aa12.66□□□□□ -0.38
CCDC12-208ENST00000603885 GNPNAT1Q96EK6 184 aaPredicted RBP12.66□□□□□ -0.38
CCDC12-208ENST00000603885 Q9H3A6 140 aa12.66□□□□□ -0.38
CCDC12-208ENST00000603885 WFDC1Q9HC57 220 aa12.66□□□□□ -0.38
CCDC12-208ENST00000603885 GSN-AS1Q9NRJ2 163 aa12.66□□□□□ -0.38
CCDC12-208ENST00000603885 TRBV7-9A0A0J9YWB2 115 aa12.65□□□□□ -0.38
CCDC12-208ENST00000603885 RBAKDNA6NC62 111 aa12.65□□□□□ -0.38
CCDC12-208ENST00000603885 RGS13O14921 159 aa12.65□□□□□ -0.38
CCDC12-208ENST00000603885 ACOT6Q3I5F7 207 aaPredicted RBP12.65□□□□□ -0.38
CCDC12-208ENST00000603885 C11orf72Q8NBR9 251 aa12.65□□□□□ -0.38
CCDC12-208ENST00000603885 TRGV2A0A075B6R0 118 aa12.64□□□□□ -0.39
CCDC12-208ENST00000603885 A0A1B0GVY2 172 aa12.64□□□□□ -0.39
CCDC12-208ENST00000603885 HOXA5P20719 270 aa12.64□□□□□ -0.39
CCDC12-208ENST00000603885 PRR9Q5T870 116 aa12.64□□□□□ -0.39
CCDC12-208ENST00000603885 ZNRF2Q8NHG8 242 aa12.64□□□□□ -0.39
CCDC12-208ENST00000603885 Q8TAT8 98 aa12.64□□□□□ -0.39
CCDC12-208ENST00000603885 RXFP4Q8TDU9 374 aa12.64□□□□□ -0.39
CCDC12-208ENST00000603885 TMPRSS5Q9H3S3 457 aa12.64□□□□□ -0.39
CCDC12-208ENST00000603885 TRGV1A0A0A0MS02 117 aa12.63□□□□□ -0.39
CCDC12-208ENST00000603885 A0A0J9YY99 117 aa12.63□□□□□ -0.39
CCDC12-208ENST00000603885 IBA57Q5T440 356 aaKnown RBP12.63□□□□□ -0.39
CCDC12-208ENST00000603885 C1orf134Q5TEV5 83 aa12.63□□□□□ -0.39
CCDC12-208ENST00000603885 LINC00588Q9Y4M8 146 aa12.63□□□□□ -0.39
CCDC12-208ENST00000603885 IGHV1OR15-1A0A075B7D0 117 aa12.62□□□□□ -0.39
CCDC12-208ENST00000603885 A0A1W2PPV4 95 aa12.62□□□□□ -0.39
CCDC12-208ENST00000603885 H3BNG1 76 aa12.62□□□□□ -0.39
CCDC12-208ENST00000603885 TCL1AP56279 114 aa12.62□□□□□ -0.39
CCDC12-208ENST00000603885 PQLC2Q6ZP29 291 aa12.62□□□□□ -0.39
CCDC12-208ENST00000603885 SSX7Q7RTT5 188 aa12.62□□□□□ -0.39
CCDC12-208ENST00000603885 C18orf15Q96N68 181 aa12.62□□□□□ -0.39
CCDC12-208ENST00000603885 ARPC5LQ9BPX5 153 aa12.62□□□□□ -0.39
CCDC12-208ENST00000603885 MED28Q9H204 178 aa12.62□□□□□ -0.39
CCDC12-208ENST00000603885 NBDYA0A0U1RRE5 68 aa12.61□□□□□ -0.39
CCDC12-208ENST00000603885 DIRC3C9JPN6 131 aa12.61□□□□□ -0.39
CCDC12-208ENST00000603885 EIF3GO75821 320 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC12-208ENST00000603885 RAB2AP61019 212 aa12.61□□□□□ -0.39
CCDC12-208ENST00000603885 ZNF266Q14584 549 aa12.61□□□□□ -0.39
CCDC12-208ENST00000603885 FAM74A1Q5RGS3 127 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms