RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 PRR27Q6MZM9 219 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 ZNF502Q8TBZ5 544 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 EEF1AKMT3Q96AZ1 226 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 RNF125Q96EQ8 232 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 USMG5Q96IX5 58 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 ATP6V0BQ99437 205 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 S4R3C0 116 aa9.04□□□□□ -0.96
VRK3-223ENST00000601341 A0A0G2JLM5 398 aa9.03□□□□□ -0.96
VRK3-223ENST00000601341 CYSRT1A8MQ03 144 aa9.03□□□□□ -0.96
VRK3-223ENST00000601341 F2Z2F3 143 aa9.03□□□□□ -0.96
VRK3-223ENST00000601341 RAB9AP51151 201 aa9.03□□□□□ -0.96
VRK3-223ENST00000601341 KIAA1644Q3SXP7 199 aa9.03□□□□□ -0.96
VRK3-223ENST00000601341 GATD1Q8NB37 220 aa9.03□□□□□ -0.96
VRK3-223ENST00000601341 RCHY1Q96PM5 261 aa9.03□□□□□ -0.96
VRK3-223ENST00000601341 NSD1Q96L73 2696 aaPredicted RBP9.02□□□□□ -0.96
VRK3-223ENST00000601341 DIRC3C9JPN6 131 aa9.02□□□□□ -0.97
VRK3-223ENST00000601341 F8W735 103 aaPredicted RBP9.02□□□□□ -0.97
VRK3-223ENST00000601341 HAX1O00165 279 aa9.02□□□□□ -0.97
VRK3-223ENST00000601341 MRPS12O15235 138 aaKnown RBP9.02□□□□□ -0.97
VRK3-223ENST00000601341 IGHV3-23P01764 117 aa9.02□□□□□ -0.97
VRK3-223ENST00000601341 PSMB8P28062 276 aa9.02□□□□□ -0.97
VRK3-223ENST00000601341 PMCHL1Q16048 86 aa9.02□□□□□ -0.97
VRK3-223ENST00000601341 GDF5OSQ5U4N7 250 aa9.02□□□□□ -0.97
VRK3-223ENST00000601341 SIGLEC15Q6ZMC9 328 aa9.02□□□□□ -0.97
VRK3-223ENST00000601341 Q6ZSV7 163 aa9.02□□□□□ -0.97
VRK3-223ENST00000601341 COX8CQ7Z4L0 72 aa9.02□□□□□ -0.97
VRK3-223ENST00000601341 BORCS7Q96B45 105 aa9.02□□□□□ -0.97
VRK3-223ENST00000601341 CHCHD1Q96BP2 118 aaKnown RBP9.02□□□□□ -0.97
VRK3-223ENST00000601341 NDFIP1Q9BT67 221 aa9.02□□□□□ -0.97
VRK3-223ENST00000601341 KLK15Q9H2R5 256 aa9.02□□□□□ -0.97
VRK3-223ENST00000601341 F8P00451 2351 aa9.02□□□□□ -0.97
VRK3-223ENST00000601341 C20orf202A1L168 122 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 OR2T8A6NH00 312 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 CLEC3BP05452 202 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 ELANEP08246 267 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 CTSGP08311 255 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 PMCHP20382 165 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 FOXE3Q13461 319 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 LEMD1Q68G75 181 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 NIT1Q86X76 327 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 Q8N976 141 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 TCF21O43680 179 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 HSBP1O75506 76 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 GPR183P32249 361 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 PSG9Q00887 426 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 PSG3Q16557 428 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 CLEC19AQ6UXS0 136 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 LINC00322Q6ZN03 302 aaPredicted RBP9.01□□□□□ -0.97
VRK3-223ENST00000601341 GTSF1Q8WW33 167 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 ZNF414Q96IQ9 312 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 CCDC140Q96MF4 163 aa9.01□□□□□ -0.97
VRK3-223ENST00000601341 IL4P05112 153 aa9□□□□□ -0.97
VRK3-223ENST00000601341 CTRLP40313 264 aa9□□□□□ -0.97
VRK3-223ENST00000601341 KRTDAPP60985 99 aa9□□□□□ -0.97
VRK3-223ENST00000601341 GOLT1AQ6ZVE7 132 aa9□□□□□ -0.97
VRK3-223ENST00000601341 KLHDC1Q8N7A1 406 aa9□□□□□ -0.97
VRK3-223ENST00000601341 C16orf95Q9H693 158 aa9□□□□□ -0.97
VRK3-223ENST00000601341 AAMDCQ9H7C9 122 aa9□□□□□ -0.97
VRK3-223ENST00000601341 FN1P02751 2386 aaKnown RBP9□□□□□ -0.97
VRK3-223ENST00000601341 A0A1B0GV90 55 aa8.99□□□□□ -0.97
VRK3-223ENST00000601341 APOHP02749 345 aaPredicted RBP8.99□□□□□ -0.97
VRK3-223ENST00000601341 OR5AL1P0C617 328 aa8.99□□□□□ -0.97
VRK3-223ENST00000601341 C3orf79P0CE67 100 aa8.99□□□□□ -0.97
VRK3-223ENST00000601341 RPL7P18124 248 aaKnown RBP8.99□□□□□ -0.97
VRK3-223ENST00000601341 NUTF2P61970 127 aaKnown RBP8.99□□□□□ -0.97
VRK3-223ENST00000601341 C10orf99Q6UWK7 81 aa8.99□□□□□ -0.97
VRK3-223ENST00000601341 LCNL1Q6ZST4 164 aa8.99□□□□□ -0.97
VRK3-223ENST00000601341 RNF152Q8N8N0 203 aa8.99□□□□□ -0.97
VRK3-223ENST00000601341 SNHG12Q9BXW3 62 aa8.99□□□□□ -0.97
VRK3-223ENST00000601341 RPH3ALQ9UNE2 315 aa8.99□□□□□ -0.97
VRK3-223ENST00000601341 CRXO43186 299 aaPredicted RBP8.99□□□□□ -0.97
VRK3-223ENST00000601341 SNRPCP09234 159 aaKnown RBP8.99□□□□□ -0.97
VRK3-223ENST00000601341 CAMPP49913 170 aa8.99□□□□□ -0.97
VRK3-223ENST00000601341 RIGQ13278 110 aa8.99□□□□□ -0.97
VRK3-223ENST00000601341 TCF24Q7RTU0 167 aa8.99□□□□□ -0.97
VRK3-223ENST00000601341 EXOC3-AS1Q8N2X6 119 aa8.99□□□□□ -0.97
VRK3-223ENST00000601341 OR2D3Q8NGH3 330 aa8.99□□□□□ -0.97
VRK3-223ENST00000601341 LOC102724200A0A096LPH7 203 aaPredicted RBP8.98□□□□□ -0.97
VRK3-223ENST00000601341 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.98□□□□□ -0.97
VRK3-223ENST00000601341 A0A1B0GUT8 65 aa8.98□□□□□ -0.97
VRK3-223ENST00000601341 NDUFA7O95182 113 aa8.98□□□□□ -0.97
VRK3-223ENST00000601341 IGHV3-11P01762 117 aa8.98□□□□□ -0.97
VRK3-223ENST00000601341 RPLP1P05386 114 aaKnown RBP8.98□□□□□ -0.97
VRK3-223ENST00000601341 CD33P20138 364 aa8.98□□□□□ -0.97
VRK3-223ENST00000601341 BTF3P20290 206 aaKnown RBP8.98□□□□□ -0.97
VRK3-223ENST00000601341 CSN1S1P47710 185 aa8.98□□□□□ -0.97
VRK3-223ENST00000601341 RELQ04864 619 aaPredicted RBP8.98□□□□□ -0.97
VRK3-223ENST00000601341 PRNTQ86SH4 94 aa8.98□□□□□ -0.97
VRK3-223ENST00000601341 OR4X2Q8NGF9 303 aa8.98□□□□□ -0.97
VRK3-223ENST00000601341 PSG8Q9UQ74 426 aa8.98□□□□□ -0.97
VRK3-223ENST00000601341 CHEK1O14757 476 aa8.97□□□□□ -0.97
VRK3-223ENST00000601341 ARL3P36405 182 aa8.97□□□□□ -0.97
VRK3-223ENST00000601341 SAPCD1Q5SSQ6 148 aa8.97□□□□□ -0.97
VRK3-223ENST00000601341 LINC01006Q8NI28 216 aa8.97□□□□□ -0.97
VRK3-223ENST00000601341 MYOZ3Q8TDC0 251 aa8.97□□□□□ -0.97
VRK3-223ENST00000601341 PGLYRP4Q96LB8 373 aa8.97□□□□□ -0.97
VRK3-223ENST00000601341 UQCR10Q9UDW1 63 aa8.97□□□□□ -0.97
VRK3-223ENST00000601341 PAM16Q9Y3D7 125 aa8.97□□□□□ -0.97
VRK3-223ENST00000601341 TRAV8-1A0A0A6YYK1 113 aa8.96□□□□□ -0.97
VRK3-223ENST00000601341 M0R2Z0 102 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 569.9 ms