RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 TRBV12-3P01733 135 aa17.45■□□□□ 0.38
SRRM1-222ENST00000596378 RAB9AP51151 201 aa17.45■□□□□ 0.38
SRRM1-222ENST00000596378 BATFQ16520 125 aa17.45■□□□□ 0.38
SRRM1-222ENST00000596378 ZNF493Q6ZR52 646 aa17.45■□□□□ 0.38
SRRM1-222ENST00000596378 TRAV8-2A0A0B4J237 113 aa17.44■□□□□ 0.38
SRRM1-222ENST00000596378 H3BUX3 64 aa17.44■□□□□ 0.38
SRRM1-222ENST00000596378 D6R8Y8 96 aa17.44■□□□□ 0.38
SRRM1-222ENST00000596378 ORM1P02763 201 aa17.44■□□□□ 0.38
SRRM1-222ENST00000596378 MCRIP2Q9BUT9 160 aaKnown RBP17.44■□□□□ 0.38
SRRM1-222ENST00000596378 MEGF9Q9H1U4 602 aa17.44■□□□□ 0.38
SRRM1-222ENST00000596378 FBLL1A6NHQ2 334 aaKnown RBP17.43■□□□□ 0.38
SRRM1-222ENST00000596378 SYS1-DBNDD2H3BUS1 97 aa17.43■□□□□ 0.38
SRRM1-222ENST00000596378 BMI1P35226 326 aa17.43■□□□□ 0.38
SRRM1-222ENST00000596378 FER1L6-AS1Q8NA97 138 aa17.43■□□□□ 0.38
SRRM1-222ENST00000596378 NDUFS8O00217 210 aa17.42■□□□□ 0.38
SRRM1-222ENST00000596378 FAM106AQ4KMX7 169 aa17.42■□□□□ 0.38
SRRM1-222ENST00000596378 Q6ZS46 218 aa17.42■□□□□ 0.38
SRRM1-222ENST00000596378 C8orf86Q6ZUL3 223 aa17.42■□□□□ 0.38
SRRM1-222ENST00000596378 SLC50A1Q9BRV3 221 aa17.42■□□□□ 0.38
SRRM1-222ENST00000596378 UQCR10Q9UDW1 63 aa17.42■□□□□ 0.38
SRRM1-222ENST00000596378 TRAV9-2A0A087WT02 112 aa17.42■□□□□ 0.38
SRRM1-222ENST00000596378 LOC389332A0A1B0GUA5 103 aa17.42■□□□□ 0.38
SRRM1-222ENST00000596378 H0Y8G0 127 aa17.42■□□□□ 0.38
SRRM1-222ENST00000596378 TWIST1Q15672 202 aa17.42■□□□□ 0.38
SRRM1-222ENST00000596378 FAM104BQ5XKR9 115 aa17.42■□□□□ 0.38
SRRM1-222ENST00000596378 Q6ZN92 141 aa17.42■□□□□ 0.38
SRRM1-222ENST00000596378 FAM223BA6NKX1 122 aa17.41■□□□□ 0.38
SRRM1-222ENST00000596378 IGLL1P15814 213 aa17.41■□□□□ 0.38
SRRM1-222ENST00000596378 ARL3P36405 182 aa17.41■□□□□ 0.38
SRRM1-222ENST00000596378 FAM223AQ8IWN6 122 aa17.41■□□□□ 0.38
SRRM1-222ENST00000596378 AGPAT4-IT1Q9H0P7 198 aa17.41■□□□□ 0.38
SRRM1-222ENST00000596378 AVPP01185 164 aa17.41■□□□□ 0.38
SRRM1-222ENST00000596378 MSMBP08118 114 aa17.41■□□□□ 0.38
SRRM1-222ENST00000596378 IGLC6P0CF74 106 aa17.41■□□□□ 0.38
SRRM1-222ENST00000596378 IFI27P40305 119 aaPredicted RBP17.41■□□□□ 0.38
SRRM1-222ENST00000596378 BLCAPP62952 87 aa17.41■□□□□ 0.38
SRRM1-222ENST00000596378 UNQ9165/PRO28630Q6UXU0 137 aa17.41■□□□□ 0.38
SRRM1-222ENST00000596378 AP5S1Q9NUS5 200 aa17.41■□□□□ 0.38
SRRM1-222ENST00000596378 MSRB1Q9NZV6 116 aa17.41■□□□□ 0.38
SRRM1-222ENST00000596378 U3KQE9 123 aa17.41■□□□□ 0.38
SRRM1-222ENST00000596378 OR4C46A6NHA9 309 aa17.4■□□□□ 0.38
SRRM1-222ENST00000596378 IGHV3-11P01762 117 aa17.4■□□□□ 0.38
SRRM1-222ENST00000596378 PPIFP30405 207 aaKnown RBP17.4■□□□□ 0.38
SRRM1-222ENST00000596378 CRIP2P52943 208 aaPredicted RBP17.4■□□□□ 0.38
SRRM1-222ENST00000596378 LCNL1Q6ZST4 164 aa17.4■□□□□ 0.38
SRRM1-222ENST00000596378 PRSS3P2Q8NHM4 247 aa17.4■□□□□ 0.38
SRRM1-222ENST00000596378 PSMG3-AS1Q96PY0 264 aa17.4■□□□□ 0.38
SRRM1-222ENST00000596378 ZFYVE26Q68DK2 2539 aa17.4■□□□□ 0.38
SRRM1-222ENST00000596378 FABP5P3A8MUU1 101 aa17.39■□□□□ 0.38
SRRM1-222ENST00000596378 SMKR1H3BMG3 65 aa17.39■□□□□ 0.38
SRRM1-222ENST00000596378 CRXO43186 299 aaPredicted RBP17.39■□□□□ 0.38
SRRM1-222ENST00000596378 MRPL51Q4U2R6 128 aaKnown RBP17.39■□□□□ 0.38
SRRM1-222ENST00000596378 LOXL1Q08397 574 aaPredicted RBP17.39■□□□□ 0.37
SRRM1-222ENST00000596378 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.39■□□□□ 0.373e-7■■■■■ 28.3
SRRM1-222ENST00000596378 RPS20P60866 119 aaKnown RBP17.38■□□□□ 0.37
SRRM1-222ENST00000596378 FA2HQ7L5A8 372 aa17.38■□□□□ 0.37
SRRM1-222ENST00000596378 KLHDC1Q8N7A1 406 aa17.38■□□□□ 0.37
SRRM1-222ENST00000596378 PRELID3AQ96N28 172 aa17.38■□□□□ 0.37
SRRM1-222ENST00000596378 KLK15Q9H2R5 256 aa17.38■□□□□ 0.37
SRRM1-222ENST00000596378 HIF1ANQ9NWT6 349 aa17.38■□□□□ 0.37
SRRM1-222ENST00000596378 TP73-AS1Q9UF72 201 aa17.38■□□□□ 0.37
SRRM1-222ENST00000596378 A6NDX4 124 aa17.38■□□□□ 0.37
SRRM1-222ENST00000596378 IGF1P05019 195 aa17.38■□□□□ 0.37
SRRM1-222ENST00000596378 RBAKDNA6NC62 111 aa17.37■□□□□ 0.37
SRRM1-222ENST00000596378 M0QZK8 103 aa17.37■□□□□ 0.37
SRRM1-222ENST00000596378 SMAD7O15105 426 aaKnown RBP17.37■□□□□ 0.37
SRRM1-222ENST00000596378 TCAPO15273 167 aa17.37■□□□□ 0.37
SRRM1-222ENST00000596378 OR5AL1P0C617 328 aa17.37■□□□□ 0.37
SRRM1-222ENST00000596378 HNRNPA3P51991 378 aaKnown RBP17.37■□□□□ 0.37
SRRM1-222ENST00000596378 Q6ZQT7 251 aa17.37■□□□□ 0.37
SRRM1-222ENST00000596378 C11orf21Q9P2W6 132 aa17.37■□□□□ 0.37
SRRM1-222ENST00000596378 NCR2O95944 276 aa17.37■□□□□ 0.37
SRRM1-222ENST00000596378 PMCHL2Q9BQD1 86 aa17.37■□□□□ 0.37
SRRM1-222ENST00000596378 SIGLEC8Q9NYZ4 499 aa17.37■□□□□ 0.37
SRRM1-222ENST00000596378 U3KQK5 164 aa17.37■□□□□ 0.37
SRRM1-222ENST00000596378 hDV102S1A0JD36 115 aa17.36■□□□□ 0.37
SRRM1-222ENST00000596378 PRB1P04280 392 aa17.36■□□□□ 0.37
SRRM1-222ENST00000596378 MRPL52Q86TS9 123 aaKnown RBP17.36■□□□□ 0.37
SRRM1-222ENST00000596378 ORMDL3Q8N138 153 aa17.36■□□□□ 0.37
SRRM1-222ENST00000596378 CSPG4Q6UVK1 2322 aa17.36■□□□□ 0.37
SRRM1-222ENST00000596378 IGHG2P01859 326 aa17.36■□□□□ 0.37
SRRM1-222ENST00000596378 FXYD7P58549 80 aa17.36■□□□□ 0.37
SRRM1-222ENST00000596378 GLMPQ8WWB7 406 aa17.36■□□□□ 0.37
SRRM1-222ENST00000596378 MAP1LC3CQ9BXW4 147 aa17.36■□□□□ 0.37
SRRM1-222ENST00000596378 FBN2P35556 2912 aa17.35■□□□□ 0.37
SRRM1-222ENST00000596378 C16orf92Q96LL3 132 aa17.35■□□□□ 0.37
SRRM1-222ENST00000596378 SELENOKQ9Y6D0 94 aa17.35■□□□□ 0.37
SRRM1-222ENST00000596378 IGKV3D-20A0A0C4DH25 116 aa17.35■□□□□ 0.37
SRRM1-222ENST00000596378 RPLP1P05386 114 aaKnown RBP17.35■□□□□ 0.37
SRRM1-222ENST00000596378 PF4V1P10720 104 aa17.35■□□□□ 0.37
SRRM1-222ENST00000596378 TMEM78Q5T7P6 136 aa17.35■□□□□ 0.37
SRRM1-222ENST00000596378 C20orf173Q96LM9 149 aa17.35■□□□□ 0.37
SRRM1-222ENST00000596378 CENPEQ02224 2701 aa17.34■□□□□ 0.37
SRRM1-222ENST00000596378 TMEM8BA6NDV4 472 aa17.34■□□□□ 0.37
SRRM1-222ENST00000596378 G0S2P27469 103 aa17.34■□□□□ 0.37
SRRM1-222ENST00000596378 LINC01559Q495D7 138 aa17.34■□□□□ 0.37
SRRM1-222ENST00000596378 HSPB8Q9UJY1 196 aa17.34■□□□□ 0.37
SRRM1-222ENST00000596378 USP24Q9UPU5 2620 aa17.34■□□□□ 0.37
SRRM1-222ENST00000596378 A0A096LNJ9 63 aa17.33■□□□□ 0.37
SRRM1-222ENST00000596378 NPYP01303 97 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms