RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 IGHV7-4-1A0A0J9YVY3 117 aa7.96□□□□□ -1.14
VPS25-203ENST00000589520 TRBV7-9A0A0J9YWB2 115 aa7.96□□□□□ -1.14
VPS25-203ENST00000589520 A0A1B0GUT8 65 aa7.96□□□□□ -1.14
VPS25-203ENST00000589520 SPINK4O60575 86 aa7.96□□□□□ -1.14
VPS25-203ENST00000589520 AMBPP02760 352 aa7.96□□□□□ -1.14
VPS25-203ENST00000589520 JOSD1Q15040 202 aaPredicted RBP7.96□□□□□ -1.14
VPS25-203ENST00000589520 TMEM78Q5T7P6 136 aa7.96□□□□□ -1.14
VPS25-203ENST00000589520 C9orf47Q6ZRZ4 202 aa7.96□□□□□ -1.14
VPS25-203ENST00000589520 Q6ZS46 218 aa7.96□□□□□ -1.14
VPS25-203ENST00000589520 C8orf86Q6ZUL3 223 aa7.96□□□□□ -1.14
VPS25-203ENST00000589520 MAPK1IP1LQ8NDC0 245 aa7.96□□□□□ -1.14
VPS25-203ENST00000589520 GTSF1Q8WW33 167 aa7.96□□□□□ -1.14
VPS25-203ENST00000589520 UBE2E2Q96LR5 201 aa7.96□□□□□ -1.14
VPS25-203ENST00000589520 LINC00477Q96M19 166 aa7.96□□□□□ -1.14
VPS25-203ENST00000589520 IGKV2-40A0A087WW87 121 aaPredicted RBP7.95□□□□□ -1.14
VPS25-203ENST00000589520 TRAV8-2A0A0B4J237 113 aa7.95□□□□□ -1.14
VPS25-203ENST00000589520 LGALS9O00182 355 aa7.95□□□□□ -1.14
VPS25-203ENST00000589520 IGKV2D-40P01614 121 aaPredicted RBP7.95□□□□□ -1.14
VPS25-203ENST00000589520 IGHV3-11P01762 117 aa7.95□□□□□ -1.14
VPS25-203ENST00000589520 APOHP02749 345 aaPredicted RBP7.95□□□□□ -1.14
VPS25-203ENST00000589520 ID1P41134 155 aa7.95□□□□□ -1.14
VPS25-203ENST00000589520 CRIP1P50238 77 aa7.95□□□□□ -1.14
VPS25-203ENST00000589520 ZNF138P52744 262 aa7.95□□□□□ -1.14
VPS25-203ENST00000589520 HIST1H1AQ02539 215 aaPredicted RBP7.95□□□□□ -1.14
VPS25-203ENST00000589520 PDZD11Q5EBL8 140 aa7.95□□□□□ -1.14
VPS25-203ENST00000589520 TCF24Q7RTU0 167 aa7.95□□□□□ -1.14
VPS25-203ENST00000589520 MYOZ3Q8TDC0 251 aa7.95□□□□□ -1.14
VPS25-203ENST00000589520 WFDC12Q8WWY7 111 aa7.95□□□□□ -1.14
VPS25-203ENST00000589520 PGLYRP4Q96LB8 373 aa7.95□□□□□ -1.14
VPS25-203ENST00000589520 NIT2Q9NQR4 276 aa7.95□□□□□ -1.14
VPS25-203ENST00000589520 SMPXQ9UHP9 88 aa7.95□□□□□ -1.14
VPS25-203ENST00000589520 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.94□□□□□ -1.145e-7■■□□□ 14.5
VPS25-203ENST00000589520 IGHV3OR16-8A0A075B7F1 116 aa7.94□□□□□ -1.14
VPS25-203ENST00000589520 HOXA3O43365 443 aaPredicted RBP7.94□□□□□ -1.14
VPS25-203ENST00000589520 SH2D1AO60880 128 aa7.94□□□□□ -1.14
VPS25-203ENST00000589520 LGALS1P09382 135 aaKnown RBP7.94□□□□□ -1.14
VPS25-203ENST00000589520 SRIP30626 198 aa7.94□□□□□ -1.14
VPS25-203ENST00000589520 CAMPP49913 170 aa7.94□□□□□ -1.14
VPS25-203ENST00000589520 PYY3Q5JQD4 70 aa7.94□□□□□ -1.14
VPS25-203ENST00000589520 UNQ9165/PRO28630Q6UXU0 137 aa7.94□□□□□ -1.14
VPS25-203ENST00000589520 REC114Q7Z4M0 266 aa7.94□□□□□ -1.14
VPS25-203ENST00000589520 C8orf49Q96NF6 230 aa7.94□□□□□ -1.14
VPS25-203ENST00000589520 VGLL1Q99990 258 aa7.94□□□□□ -1.14
VPS25-203ENST00000589520 ZNF702PQ9H963 129 aa7.94□□□□□ -1.14
VPS25-203ENST00000589520 NRN1Q9NPD7 142 aa7.94□□□□□ -1.14
VPS25-203ENST00000589520 PRRC2AP48634 2157 aaKnown RBP7.93□□□□□ -1.14
VPS25-203ENST00000589520 IGHV3-66A0A0C4DH42 116 aa7.93□□□□□ -1.14
VPS25-203ENST00000589520 ZNF705FA8MVS1 300 aaPredicted RBP7.93□□□□□ -1.14
VPS25-203ENST00000589520 F2Z2F3 143 aa7.93□□□□□ -1.14
VPS25-203ENST00000589520 ZNF207O43670 478 aaKnown RBP7.93□□□□□ -1.14
VPS25-203ENST00000589520 TRBV12-3P01733 135 aa7.93□□□□□ -1.14
VPS25-203ENST00000589520 RAB4AP20338 218 aa7.93□□□□□ -1.14
VPS25-203ENST00000589520 LINC01559Q495D7 138 aa7.93□□□□□ -1.14
VPS25-203ENST00000589520 ZNF493Q6ZR52 646 aa7.93□□□□□ -1.14
VPS25-203ENST00000589520 RHPN1-AS1Q9BWJ2 59 aa7.93□□□□□ -1.14
VPS25-203ENST00000589520 AGPAT4-IT1Q9H0P7 198 aa7.93□□□□□ -1.14
VPS25-203ENST00000589520 NBEAL1Q6ZS30 2694 aa7.92□□□□□ -1.14
VPS25-203ENST00000589520 IGHV3OR16-13A0A075B7E8 117 aa7.92□□□□□ -1.14
VPS25-203ENST00000589520 IGHV3-74A0A0B4J1X5 117 aa7.92□□□□□ -1.14
VPS25-203ENST00000589520 GRIFINA4D1Z8 144 aa7.92□□□□□ -1.14
VPS25-203ENST00000589520 SOCS3O14543 225 aa7.92□□□□□ -1.14
VPS25-203ENST00000589520 SMAD7O15105 426 aaKnown RBP7.92□□□□□ -1.14
VPS25-203ENST00000589520 CD5LO43866 347 aa7.92□□□□□ -1.14
VPS25-203ENST00000589520 FRMD6-AS1P0C7T7 363 aa7.92□□□□□ -1.14
VPS25-203ENST00000589520 HLA-DMBP28068 263 aa7.92□□□□□ -1.14
VPS25-203ENST00000589520 SLAQ13239 276 aa7.92□□□□□ -1.14
VPS25-203ENST00000589520 IQCJQ1A5X6 159 aa7.92□□□□□ -1.14
VPS25-203ENST00000589520 TMEM256Q8N2U0 113 aa7.92□□□□□ -1.14
VPS25-203ENST00000589520 SIGLECL1Q8N7X8 197 aa7.92□□□□□ -1.14
VPS25-203ENST00000589520 OR10J6PQ8NGY7 276 aa7.92□□□□□ -1.14
VPS25-203ENST00000589520 KCNS1Q96KK3 526 aa7.92□□□□□ -1.14
VPS25-203ENST00000589520 ALKBH7Q9BT30 221 aaPredicted RBP7.92□□□□□ -1.14
VPS25-203ENST00000589520 CCDC168Q8NDH2 2452 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 IGHV3-49A0A0A0MS15 119 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 PRAC2D3DTV9 90 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 M0QZ24 198 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 SERF1AO75920 110 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 GPX1P07203 203 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 PMCHP20382 165 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 KIAA1644Q3SXP7 199 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 GDF5OSQ5U4N7 250 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 IGFL4Q6B9Z1 124 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 IL17RELQ6ZVW7 336 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 FER1L6-AS1Q8NA97 138 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 ZNF738Q8NE65 137 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 WFDC11Q8NEX6 87 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 C18orf32Q8TCD1 76 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 CHCHD1Q96BP2 118 aaKnown RBP7.91□□□□□ -1.14
VPS25-203ENST00000589520 SAMD10Q9BYL1 202 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 TP53TG3Q9ULZ0 132 aa7.91□□□□□ -1.14
VPS25-203ENST00000589520 LOC102724200A0A096LPH7 203 aaPredicted RBP7.9□□□□□ -1.14
VPS25-203ENST00000589520 ORM1P02763 201 aa7.9□□□□□ -1.14
VPS25-203ENST00000589520 RPLP1P05386 114 aaKnown RBP7.9□□□□□ -1.14
VPS25-203ENST00000589520 IGLC6P0CF74 106 aa7.9□□□□□ -1.14
VPS25-203ENST00000589520 CTRLP40313 264 aa7.9□□□□□ -1.14
VPS25-203ENST00000589520 RPL11P62913 178 aaKnown RBP7.9□□□□□ -1.14
VPS25-203ENST00000589520 TM4SF20Q53R12 229 aa7.9□□□□□ -1.14
VPS25-203ENST00000589520 RNF182Q8N6D2 247 aa7.9□□□□□ -1.14
VPS25-203ENST00000589520 CNFNQ9BYD5 112 aa7.9□□□□□ -1.14
VPS25-203ENST00000589520 TMEM160Q9NX00 188 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms