RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ZC2HC1AQ96GY0 325 aa15.47■□□□□ 0.07
ATG4D-204ENST00000586417 TRAV9-1A0A075B6T8 112 aa15.46■□□□□ 0.07
ATG4D-204ENST00000586417 FBLL1A6NHQ2 334 aaKnown RBP15.46■□□□□ 0.07
ATG4D-204ENST00000586417 KLHL30-AS1Q8NEE0 82 aa15.46■□□□□ 0.07
ATG4D-204ENST00000586417 TMEM158Q8WZ71 300 aa15.46■□□□□ 0.07
ATG4D-204ENST00000586417 C16orf92Q96LL3 132 aa15.46■□□□□ 0.07
ATG4D-204ENST00000586417 SMIM27A0A1W2PRY6 76 aa15.45■□□□□ 0.06
ATG4D-204ENST00000586417 ADARB2-AS1A8MUL3 147 aa15.45■□□□□ 0.06
ATG4D-204ENST00000586417 PHOX2AO14813 284 aa15.45■□□□□ 0.06
ATG4D-204ENST00000586417 TRGC2P03986 189 aa15.45■□□□□ 0.06
ATG4D-204ENST00000586417 NRN1Q9NPD7 142 aa15.45■□□□□ 0.06
ATG4D-204ENST00000586417 CLEC5AQ9NY25 188 aa15.45■□□□□ 0.06
ATG4D-204ENST00000586417 TSSC4Q9Y5U2 329 aaPredicted RBP15.45■□□□□ 0.06
ATG4D-204ENST00000586417 RBAKDNA6NC62 111 aa15.44■□□□□ 0.06
ATG4D-204ENST00000586417 KLF5Q13887 457 aaPredicted RBP15.44■□□□□ 0.06
ATG4D-204ENST00000586417 COX8CQ7Z4L0 72 aa15.44■□□□□ 0.06
ATG4D-204ENST00000586417 BTF3L4Q96K17 158 aa15.44■□□□□ 0.06
ATG4D-204ENST00000586417 C20orf173Q96LM9 149 aa15.44■□□□□ 0.06
ATG4D-204ENST00000586417 C8orf49Q96NF6 230 aa15.44■□□□□ 0.06
ATG4D-204ENST00000586417 DUX3Q96PT4 197 aa15.44■□□□□ 0.06
ATG4D-204ENST00000586417 NPIPB6E9PJ23 425 aa15.44■□□□□ 0.06
ATG4D-204ENST00000586417 GBGT1Q8N5D6 347 aa15.44■□□□□ 0.06
ATG4D-204ENST00000586417 Q8TAT8 98 aa15.44■□□□□ 0.06
ATG4D-204ENST00000586417 WNK1Q9H4A3 2382 aa15.44■□□□□ 0.06
ATG4D-204ENST00000586417 CRIP1P50238 77 aa15.43■□□□□ 0.06
ATG4D-204ENST00000586417 TCL1AP56279 114 aa15.43■□□□□ 0.06
ATG4D-204ENST00000586417 TCF24Q7RTU0 167 aa15.43■□□□□ 0.06
ATG4D-204ENST00000586417 PRR25Q96S07 402 aa15.43■□□□□ 0.06
ATG4D-204ENST00000586417 RPP21Q9H633 154 aaKnown RBP15.43■□□□□ 0.06
ATG4D-204ENST00000586417 SELENOKQ9Y6D0 94 aa15.43■□□□□ 0.06
ATG4D-204ENST00000586417 LINC01619G3V211 115 aa15.42■□□□□ 0.06
ATG4D-204ENST00000586417 SLURP1P55000 103 aa15.42■□□□□ 0.06
ATG4D-204ENST00000586417 ERCC8Q13216 396 aa15.42■□□□□ 0.06
ATG4D-204ENST00000586417 NSUN5P1Q3KNT7 163 aa15.42■□□□□ 0.06
ATG4D-204ENST00000586417 CITED1Q99966 193 aa15.42■□□□□ 0.06
ATG4D-204ENST00000586417 P01737 135 aa15.41■□□□□ 0.06
ATG4D-204ENST00000586417 BMI1P35226 326 aa15.41■□□□□ 0.06
ATG4D-204ENST00000586417 RPL11P62913 178 aaKnown RBP15.41■□□□□ 0.06
ATG4D-204ENST00000586417 CT83Q5H943 113 aa15.41■□□□□ 0.06
ATG4D-204ENST00000586417 SAPCD1Q5SSQ6 148 aa15.41■□□□□ 0.06
ATG4D-204ENST00000586417 OR11H1Q8NG94 326 aa15.41■□□□□ 0.06
ATG4D-204ENST00000586417 TSKUQ8WUA8 353 aa15.41■□□□□ 0.06
ATG4D-204ENST00000586417 GPR61Q9BZJ8 451 aa15.41■□□□□ 0.06
ATG4D-204ENST00000586417 DAZAP1Q96EP5 407 aaKnown RBP15.41■□□□□ 0.06
ATG4D-204ENST00000586417 C2orf70A6NJV1 201 aa15.4■□□□□ 0.06
ATG4D-204ENST00000586417 CBLN1P23435 193 aa15.4■□□□□ 0.06
ATG4D-204ENST00000586417 OR1N2Q8NGR9 330 aa15.4■□□□□ 0.06
ATG4D-204ENST00000586417 AGPAT4-IT1Q9H0P7 198 aa15.4■□□□□ 0.06
ATG4D-204ENST00000586417 IGKV3-7A0A075B6H7 116 aa15.39■□□□□ 0.05
ATG4D-204ENST00000586417 ADAMTSL5Q6ZMM2 481 aa15.39■□□□□ 0.05
ATG4D-204ENST00000586417 OR4B1Q8NGF8 309 aa15.39■□□□□ 0.05
ATG4D-204ENST00000586417 DCANP1Q8TF63 244 aa15.39■□□□□ 0.05
ATG4D-204ENST00000586417 FRZBQ92765 325 aa15.39■□□□□ 0.05
ATG4D-204ENST00000586417 RAX2Q96IS3 184 aa15.39■□□□□ 0.05
ATG4D-204ENST00000586417 MDFIQ99750 246 aa15.39■□□□□ 0.05
ATG4D-204ENST00000586417 FRMD6-AS1P0C7T7 363 aa15.39■□□□□ 0.05
ATG4D-204ENST00000586417 ACTL10Q5JWF8 245 aa15.39■□□□□ 0.05
ATG4D-204ENST00000586417 C9orf47Q6ZRZ4 202 aa15.39■□□□□ 0.05
ATG4D-204ENST00000586417 NDUFA11Q86Y39 141 aa15.39■□□□□ 0.05
ATG4D-204ENST00000586417 DPF1Q92782 380 aa15.39■□□□□ 0.05
ATG4D-204ENST00000586417 NEU1Q99519 415 aa15.39■□□□□ 0.05
ATG4D-204ENST00000586417 TRRAPQ9Y4A5 3859 aa15.39■□□□□ 0.05
ATG4D-204ENST00000586417 IZUMO1RA6ND01 250 aa15.38■□□□□ 0.05
ATG4D-204ENST00000586417 HIST1H2BKO60814 126 aa15.38■□□□□ 0.05
ATG4D-204ENST00000586417 HIST1H2BJP06899 126 aa15.38■□□□□ 0.05
ATG4D-204ENST00000586417 HIST1H2BOP23527 126 aa15.38■□□□□ 0.05
ATG4D-204ENST00000586417 HIST1H2BBP33778 126 aa15.38■□□□□ 0.05
ATG4D-204ENST00000586417 HIST1H2BDP58876 126 aa15.38■□□□□ 0.05
ATG4D-204ENST00000586417 HIST1H2BCP62807 126 aa15.38■□□□□ 0.05
ATG4D-204ENST00000586417 HIST2H2BEQ16778 126 aa15.38■□□□□ 0.05
ATG4D-204ENST00000586417 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.38■□□□□ 0.05
ATG4D-204ENST00000586417 ZNF738Q8NE65 137 aa15.38■□□□□ 0.05
ATG4D-204ENST00000586417 HIST1H2BHQ93079 126 aa15.38■□□□□ 0.05
ATG4D-204ENST00000586417 HIST1H2BNQ99877 126 aa15.38■□□□□ 0.05
ATG4D-204ENST00000586417 HIST1H2BMQ99879 126 aa15.38■□□□□ 0.05
ATG4D-204ENST00000586417 CT45A10P0DMU9 189 aa15.37■□□□□ 0.05
ATG4D-204ENST00000586417 NUP35Q8NFH5 326 aa15.37■□□□□ 0.05
ATG4D-204ENST00000586417 ZNF747Q9BV97 191 aa15.37■□□□□ 0.05
ATG4D-204ENST00000586417 NAT8BQ9UHF3 227 aa15.37■□□□□ 0.05
ATG4D-204ENST00000586417 A8MWL6 223 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 TRGC1P0CF51 173 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 ZNF80P51504 273 aaPredicted RBP15.36■□□□□ 0.05
ATG4D-204ENST00000586417 C12orf54Q6X4T0 127 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 C3orf56Q8N813 242 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 OR2D3Q8NGH3 330 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 GTSF1Q8WW33 167 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 PPP1R14DQ9NXH3 145 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 HIGD1CA8MV81 97 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 SPINK4O60575 86 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 SH2D1AO60880 128 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 ZNF138P52744 262 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 TMEM78Q5T7P6 136 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 SAMD13Q5VXD3 122 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 NDFIP1Q9BT67 221 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 MS4A6AQ9H2W1 248 aa15.36■□□□□ 0.05
ATG4D-204ENST00000586417 CCL24O00175 119 aa15.35■□□□□ 0.05
ATG4D-204ENST00000586417 FHL3Q13643 280 aa15.35■□□□□ 0.05
ATG4D-204ENST00000586417 FAM162BQ5T6X4 162 aa15.35■□□□□ 0.05
ATG4D-204ENST00000586417 DLX4Q92988 240 aaPredicted RBP15.35■□□□□ 0.05
ATG4D-204ENST00000586417 GFRA4Q9GZZ7 299 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms