RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 FAM231DQ6ZW35 169 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 RNF182Q8N6D2 247 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.7□□□□□ -1.66
LIG3-206ENST00000586058 NHLRC2Q8NBF2 726 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 OR2K2Q8NGT1 345 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 OCC1Q8TAD7 63 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 WIPF2Q8TF74 440 aaPredicted RBP4.7□□□□□ -1.66
LIG3-206ENST00000586058 DLX4Q92988 240 aaPredicted RBP4.7□□□□□ -1.66
LIG3-206ENST00000586058 RAX2Q96IS3 184 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 LINC00477Q96M19 166 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 DUX3Q96PT4 197 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 IMMP2LQ96T52 175 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 SPAG8Q99932 426 aaPredicted RBP4.7□□□□□ -1.66
LIG3-206ENST00000586058 MS4A6AQ9H2W1 248 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 OSTCQ9NRP0 149 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 AURKAIP1Q9NWT8 199 aaPredicted RBP4.7□□□□□ -1.66
LIG3-206ENST00000586058 ZNF492Q9P255 531 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 KLF12Q9Y4X4 402 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 LENEPQ9Y5L5 61 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 SMAD5-AS1Q9Y6J3 95 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 ITPR2Q14571 2701 aa4.7□□□□□ -1.66
LIG3-206ENST00000586058 TRBV20OR9-2A0A075B6H5 130 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 TRAV8-1A0A0A6YYK1 113 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 A0A1W2PPQ1 181 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 A8MWL6 223 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 ZNF688P0C7X2 276 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 TSPOP30536 169 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 LEPP41159 167 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 ZNF138P52744 262 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 RPS20P60866 119 aaKnown RBP4.69□□□□□ -1.66
LIG3-206ENST00000586058 OR5I1Q13606 314 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 MAJINQ3KP22 176 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 COX19Q49B96 90 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 CT83Q5H943 113 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 PSMG4Q5JS54 123 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 FAM162BQ5T6X4 162 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 Q6AWC8 147 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 ATRAIDQ6UW56 229 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 C18orf65Q6ZTR6 163 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 SGK494Q96LW2 274 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 ASCL2Q99929 193 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 MCRIP2Q9BUT9 160 aaKnown RBP4.69□□□□□ -1.66
LIG3-206ENST00000586058 SSBP4Q9BWG4 385 aaPredicted RBP4.69□□□□□ -1.66
LIG3-206ENST00000586058 GPR61Q9BZJ8 451 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 RPP21Q9H633 154 aaKnown RBP4.69□□□□□ -1.66
LIG3-206ENST00000586058 SIGLEC8Q9NYZ4 499 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 IL36BQ9NZH7 164 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 URGCP-MRPS24S4R325 110 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 CELSR1Q9NYQ6 3014 aa4.69□□□□□ -1.66
LIG3-206ENST00000586058 TRBV7-9A0A0J9YWB2 115 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 ZNF705FA8MVS1 300 aaPredicted RBP4.68□□□□□ -1.66
LIG3-206ENST00000586058 K7EN84 100 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 K7EQG2 157 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 S100A8P05109 93 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 HLA-DMBP28068 263 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 INSL3P51460 131 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 RAB5BP61020 215 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 IGFL4Q6B9Z1 124 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 C12orf54Q6X4T0 127 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 C9orf47Q6ZRZ4 202 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 FAM24BQ8N5W8 94 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 Q8TAT8 98 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 DCANP1Q8TF63 244 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 LINC00479Q96M42 142 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 PRR25Q96S07 402 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 RNASE7Q9H1E1 156 aaKnown RBP4.68□□□□□ -1.66
LIG3-206ENST00000586058 NAT8BQ9UHF3 227 aa4.68□□□□□ -1.66
LIG3-206ENST00000586058 TRAV8-2A0A0B4J237 113 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 TRAV21A0A0B4J279 112 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 TMEM189A5PLL7 270 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 FABP5P3A8MUU1 101 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 C1orf196B1AJZ1 125 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 NPIPB6E9PJ23 425 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 SOCS3O14543 225 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 GPX1P07203 203 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 CSN3P07498 182 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 RPS10P46783 165 aaKnown RBP4.67□□□□□ -1.66
LIG3-206ENST00000586058 FAM3BP58499 235 aaPredicted RBP4.67□□□□□ -1.66
LIG3-206ENST00000586058 NUTF2P61970 127 aaKnown RBP4.67□□□□□ -1.66
LIG3-206ENST00000586058 SRSF2Q01130 221 aaKnown RBP4.67□□□□□ -1.66
LIG3-206ENST00000586058 C9orf66Q5T8R8 295 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 WDR73Q6P4I2 378 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 FOXI2Q6ZQN5 318 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 GTSCR1Q86UQ5 136 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 TMEM61Q8N0U2 210 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 C3orf56Q8N813 242 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 OR8A1Q8NGG7 326 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 OR2D3Q8NGH3 330 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 TMEM158Q8WZ71 300 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 FAM210BQ96KR6 192 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 GFRA4Q9GZZ7 299 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 SAV1Q9H4B6 383 aaPredicted RBP4.67□□□□□ -1.66
LIG3-206ENST00000586058 SONP18583 2426 aaKnown RBP4.67□□□□□ -1.66
LIG3-206ENST00000586058 ZFHX3Q15911 3703 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 ZANQ9Y493 2812 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 TLN2Q9Y4G6 2542 aa4.67□□□□□ -1.66
LIG3-206ENST00000586058 TRBV24-1A0A075B6N3 115 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 FAM231BA6NCW3 169 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 OR11H12B2RN74 326 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms