RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 M0QZK8 103 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 PPIFP30405 207 aaKnown RBP12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 ERCC8Q13216 396 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 KLHDC1Q8N7A1 406 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 U3KQK5 164 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 IGHV3OR16-13A0A075B7E8 117 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 IGHV3-74A0A0B4J1X5 117 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 TMEM213A2RRL7 107 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 H3BUX3 64 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 IGLC3P0DOY3 106 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 ARL3P36405 182 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 FAM104BQ5XKR9 115 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 C8orf86Q6ZUL3 223 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 FER1L6-AS1Q8NA97 138 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 HIF1ANQ9NWT6 349 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 UQCR10Q9UDW1 63 aa12.67□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 TRAV9-2A0A087WT02 112 aa12.66□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 C20orf202A1L168 122 aa12.66□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 ZNF207O43670 478 aaKnown RBP12.66□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 ZNF138P52744 262 aa12.66□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 NUTF2P61970 127 aaKnown RBP12.66□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 LY6EQ16553 131 aa12.66□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 LINC01559Q495D7 138 aa12.66□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 SPATA12Q7Z6I5 190 aa12.66□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 KMT2BQ9UMN6 2715 aaPredicted RBP12.66□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 B4DSR2 109 aa12.65□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 SYS1-DBNDD2H3BUS1 97 aa12.65□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 DSCR9P59020 149 aa12.65□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 GLMPQ8WWB7 406 aa12.65□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 USMG5Q96IX5 58 aa12.65□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 CNFNQ9BYD5 112 aa12.65□□□□□ -0.38
APOC4-APOC2-201ENST00000585685 IGHV3-49A0A0A0MS15 119 aa12.65□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 NDUFA4O00483 81 aa12.65□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 CSN3P07498 182 aa12.65□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 ATOH7Q8N100 152 aa12.65□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 AGPAT4-IT1Q9H0P7 198 aa12.65□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 AP5S1Q9NUS5 200 aa12.65□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 PPP1R14DQ9NXH3 145 aa12.65□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 IGSF10Q6WRI0 2623 aa12.64□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 D6R8Y8 96 aa12.64□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 ORM1P02763 201 aa12.64□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 GATA3P23771 443 aa12.64□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 LINC00173Q6ZV60 143 aa12.64□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 IL17RELQ6ZVW7 336 aa12.64□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 AMN1Q8IY45 258 aa12.64□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.64□□□□□ -0.393e-12■■□□□ 13.1
APOC4-APOC2-201ENST00000585685 C9orf47Q6ZRZ4 202 aa12.63□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 ORMDL3Q8N138 153 aa12.63□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 BBC3Q96PG8 261 aaPredicted RBP12.63□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 HSPB8Q9UJY1 196 aa12.63□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 HIST1H1AQ02539 215 aaPredicted RBP12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 TWIST1Q15672 202 aa12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 MAJINQ3KP22 176 aa12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 MRPL51Q4U2R6 128 aaKnown RBP12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 TMEM78Q5T7P6 136 aa12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 C9orf139Q6ZV77 190 aa12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 PRSS3P2Q8NHM4 247 aa12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 AVPP01185 164 aa12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 TRBV12-3P01733 135 aa12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 SSTP61278 116 aa12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 PET117Q6UWS5 81 aa12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 FA2HQ7L5A8 372 aa12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 PRELID3AQ96N28 172 aa12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 MAP1LC3CQ9BXW4 147 aa12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 TMEM191AQ9H0A3 160 aa12.62□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 COL12A1Q99715 3063 aa12.61□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 USP9XQ93008 2570 aaPredicted RBP12.61□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 OR4C46A6NHA9 309 aa12.61□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 SLC25A16P16260 332 aa12.61□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 BLCAPP62952 87 aa12.61□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 UNQ9165/PRO28630Q6UXU0 137 aa12.61□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 ZFYVE26Q68DK2 2539 aa12.61□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 MUC21A0A0G2JKD1 596 aa12.6□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 MUC21A0A140T8X8 626 aa12.6□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 IGLV1-40P01703 118 aa12.6□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 IGLL1P15814 213 aa12.6□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 IFI27P40305 119 aaPredicted RBP12.6□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 MUC21Q5SSG8 566 aa12.6□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 C16orf92Q96LL3 132 aa12.6□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 ZNF580Q9UK33 172 aa12.6□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 SPG11Q96JI7 2443 aa12.6□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 IGKV3D-20A0A0C4DH25 116 aa12.6□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 SMAD7O15105 426 aaKnown RBP12.6□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 Q6ZN92 141 aa12.6□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 OR10AG1Q8NH19 301 aa12.6□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 SIGLEC8Q9NYZ4 499 aa12.6□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 CFHR3Q02985 330 aa12.59□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 Q6ZS46 218 aa12.59□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 GPHB5Q86YW7 130 aa12.59□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 KLK15Q9H2R5 256 aa12.59□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 LENEPQ9Y5L5 61 aa12.59□□□□□ -0.39
APOC4-APOC2-201ENST00000585685 A0A0G2JLM5 398 aa12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 SOCS3O14543 225 aa12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 PF4V1P10720 104 aa12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 HNRNPA3P51991 378 aaKnown RBP12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 OR4X2Q8NGF9 303 aa12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 NRGNQ92686 78 aa12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 ZNF747Q9BV97 191 aa12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 FLNCQ14315 2725 aa12.58□□□□□ -0.4
APOC4-APOC2-201ENST00000585685 A0A096LNJ9 63 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms