RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 C8GP07360 202 aa1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 OR4E1P0C645 316 aa1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 NEFHP12036 1026 aa1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 YPEL3P61236 119 aaPredicted RBP1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 ARF6P62330 175 aa1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 TFAMQ00059 246 aaKnown RBP1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 PXT1Q8NFP0 134 aa1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 TSTD1Q8NFU3 115 aa1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 OR13D1Q8NGV5 346 aa1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 ASH1LQ9NR48 2969 aaKnown RBP1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 OPTCQ9UBM4 332 aa1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 IGF2RP11717 2491 aa1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 ZFYVE26Q68DK2 2539 aa1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 ZNF292O60281 2723 aa1.29□□□□□ -2.2
SMCHD1-205ENST00000581383 MYO7AQ13402 2215 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 USP9XQ93008 2570 aaPredicted RBP1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 CEP295Q9C0D2 2601 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 FRYLO94915 3013 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 SMG1Q96Q15 3661 aaKnown RBP1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 H3BQV1 296 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 GEMIN2O14893 280 aaKnown RBP1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 UBL3O95164 117 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 HLA-EP13747 358 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 HMGA1P17096 107 aaKnown RBP1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 S100A5P33763 92 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 PDE6HQ13956 83 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 DHRS4L2Q6PKH6 230 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 WFDC5Q8TCV5 224 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 C2orf50Q96LR7 162 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 ODF3Q96PU9 254 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 ARMC1Q9NVT9 282 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 ARL5AQ9Y689 179 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 ROS1P08922 2347 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 SPTBN2O15020 2390 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 ZNF462Q96JM2 2506 aa1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 GCN1Q92616 2671 aaKnown RBP1.28□□□□□ -2.2
SMCHD1-205ENST00000581383 EP300Q09472 2414 aaPredicted RBP1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 CEP250Q9BV73 2442 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 EML6Q6ZMW3 1958 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 TSC2P49815 1807 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 A0A087X0T9 212 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 TRAV3A0A0B4J244 114 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 CLDN25C9JDP6 229 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 C19orf84I3L1E1 186 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 BAALC-AS2P0C853 105 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 G0S2P27469 103 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 RHOBP62745 196 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 LCA10Q71F78 164 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 HIST1H2BLQ99880 126 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 IL20Q9NYY1 176 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 TVP23BQ9NYZ1 205 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 EPDR1Q9UM22 224 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 SLC35A3Q9Y2D2 325 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 WDR87Q6ZQQ6 2873 aa1.27□□□□□ -2.21
SMCHD1-205ENST00000581383 PATJQ8NI35 1801 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 ZZEF1O43149 2961 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 WDFY3Q8IZQ1 3526 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 CELSR3Q9NYQ7 3312 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 LOC400499M0QZD8 3231 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 FREM2Q5SZK8 3169 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 HMGB3O15347 200 aaKnown RBP1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 CYB5BO43169 146 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 SULT1B1O43704 296 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 APODP05090 189 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 ERP29P30040 261 aaKnown RBP1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 SRIP30626 198 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 ZNF93P35789 620 aaPredicted RBP1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 RAB4BP61018 213 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 RHOGP84095 191 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 Q6Q795 121 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 TAC4Q86UU9 113 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 OR8D4Q8NGM9 314 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 GNPDA2Q8TDQ7 276 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 AP3S1Q92572 193 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 NHP2Q9NX24 153 aaKnown RBP1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 STOML2Q9UJZ1 356 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 KLK9Q9UKQ9 250 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 FANCMQ8IYD8 2048 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 MYO18BQ8IUG5 2567 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 TNRC6BQ9UPQ9 1833 aaKnown RBP1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 BPTFQ12830 3046 aa1.26□□□□□ -2.21
SMCHD1-205ENST00000581383 AKAP13Q12802 2813 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 ITPR1Q14643 2758 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 MYH7BA7E2Y1 1941 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 SPTA1P02549 2419 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 A0A087WX48 190 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 IGKV1-9A0A0C4DH69 117 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 TMEM238C9JI98 176 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 HYPMO75409 117 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 LYZL6O75951 148 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 GNG10P50151 68 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 RPL19P84098 196 aaKnown RBP1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 TSNQ15631 228 aaKnown RBP1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 BRMS1LQ5PSV4 323 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 GOLT1AQ6ZVE7 132 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 ZNF720Q7Z2F6 126 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 LINC00301Q8NCQ3 95 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 OR11H6Q8NGC7 330 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 ADAT3Q96EY9 351 aaPredicted RBP1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 HOPXQ9BPY8 73 aaPredicted RBP1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms