RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 IGHV1-69DA0A0B4J2H0 117 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 SDHAF1A6NFY7 115 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 IGLC1P0CG04 106 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 IFITM1P13164 125 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 WT1-ASQ06250 92 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 CITED1Q99966 193 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 MCRIP2Q9BUT9 160 aaKnown RBP8.6□□□□□ -1.03
SEC22B-201ENST00000578049 C17orf58Q2M2W7 97 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 MAJINQ3KP22 176 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 IGLV3-9A0A075B6K5 115 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 TRGV1A0A0A0MS02 117 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 SS18Q15532 418 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 TMEM105Q8N8V8 129 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 KAAG1Q9UBP8 84 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 IGLV1-44P01699 117 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 PLXNA4Q9HCM2 1894 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 SCN5AQ14524 2016 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 SSC4DQ8WTU2 575 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 DPH3Q96FX2 82 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 ACYP1P07311 99 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 LHFPL4Q7Z7J7 247 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 ZNF48Q96MX3 618 aaPredicted RBP8.59□□□□□ -1.03
SEC22B-201ENST00000578049 H3BUX3 64 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 NDUFA4O00483 81 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 LYPD6Q86Y78 171 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 BRWD3Q6RI45 1802 aa8.59□□□□□ -1.03
SEC22B-201ENST00000578049 RBAKDNA6NC62 111 aa8.59□□□□□ -1.04
SEC22B-201ENST00000578049 IGHG4P01861 327 aa8.59□□□□□ -1.04
SEC22B-201ENST00000578049 UBL5Q9BZL1 73 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 NOTCH3Q9UM47 2321 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 XIRP1Q702N8 1843 aaKnown RBP8.58□□□□□ -1.04
SEC22B-201ENST00000578049 GAGE12JA6NER3 117 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 GAGE7O76087 117 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 NPYP01303 97 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 GAGE12FP0CL80 117 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 GAGE12GP0CL81 117 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 GAGE12IP0CL82 117 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 FGF6P10767 208 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 GAGE4Q13068 117 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 NDUFS7O75251 213 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 Q6ZR03 302 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 RHOHQ15669 191 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 HEATR5AQ86XA9 2040 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 NDUFA12Q9UI09 145 aa8.58□□□□□ -1.04
SEC22B-201ENST00000578049 KLRD1Q13241 179 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 A0A0G2JNJ9 132 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 J3QQQ9 107 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 C12orf74Q32Q52 190 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 WDR86Q86TI4 376 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 Q9UFV3 132 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 NDPQ00604 133 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 PRB3Q04118 309 aaPredicted RBP8.57□□□□□ -1.04
SEC22B-201ENST00000578049 PIP4P2Q8N4L2 257 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 RNF166Q96A37 237 aaPredicted RBP8.57□□□□□ -1.04
SEC22B-201ENST00000578049 VWA8A3KMH1 1905 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 CADP27708 2225 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 LYPD2Q6UXB3 125 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 PROK2Q9HC23 129 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 IGHV1OR15-1A0A075B7D0 117 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 TRAV13-2A0A0B4J235 113 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 LOXP28300 417 aaPredicted RBP8.57□□□□□ -1.04
SEC22B-201ENST00000578049 ZC2HC1AQ96GY0 325 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 HIGD1BQ9P298 99 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 DOCK9Q9BZ29 2069 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 TSC2P49815 1807 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 A0A087WWL8 130 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 RNF138Q8WVD3 245 aa8.57□□□□□ -1.04
SEC22B-201ENST00000578049 F8WEM9 126 aa8.56□□□□□ -1.04
SEC22B-201ENST00000578049 K7EN84 100 aa8.56□□□□□ -1.04
SEC22B-201ENST00000578049 OVOL3O00110 214 aa8.56□□□□□ -1.04
SEC22B-201ENST00000578049 RLFQ13129 1914 aa8.56□□□□□ -1.04
SEC22B-201ENST00000578049 TRAV13-1A0A0B4J241 112 aa8.56□□□□□ -1.04
SEC22B-201ENST00000578049 SAA4P35542 130 aa8.56□□□□□ -1.04
SEC22B-201ENST00000578049 C8orf86Q6ZUL3 223 aa8.56□□□□□ -1.04
SEC22B-201ENST00000578049 SHANK1Q9Y566 2161 aa8.56□□□□□ -1.04
SEC22B-201ENST00000578049 H3BUA1 57 aa8.56□□□□□ -1.04
SEC22B-201ENST00000578049 RPL32P62910 135 aaKnown RBP8.56□□□□□ -1.04
SEC22B-201ENST00000578049 C8orf49Q96NF6 230 aa8.56□□□□□ -1.04
SEC22B-201ENST00000578049 LINC00527Q9UJ94 153 aa8.56□□□□□ -1.04
SEC22B-201ENST00000578049 IGFL3Q6UXB1 125 aa8.56□□□□□ -1.04
SEC22B-201ENST00000578049 TCF20Q9UGU0 1960 aaKnown RBP8.56□□□□□ -1.04
SEC22B-201ENST00000578049 TCF15Q12870 199 aa8.55□□□□□ -1.04
SEC22B-201ENST00000578049 HTN3P15516 51 aa8.55□□□□□ -1.04
SEC22B-201ENST00000578049 AZU1P20160 251 aa8.55□□□□□ -1.04
SEC22B-201ENST00000578049 C1orf122Q6ZSJ8 110 aa8.55□□□□□ -1.04
SEC22B-201ENST00000578049 PRDM6Q9NQX0 595 aa8.55□□□□□ -1.04
SEC22B-201ENST00000578049 SELENOKQ9Y6D0 94 aa8.55□□□□□ -1.04
SEC22B-201ENST00000578049 MYO7BQ6PIF6 2116 aa8.55□□□□□ -1.04
SEC22B-201ENST00000578049 TMEM219Q86XT9 240 aa8.55□□□□□ -1.04
SEC22B-201ENST00000578049 NPC2P61916 151 aa8.55□□□□□ -1.04
SEC22B-201ENST00000578049 HERVK_113P63121 156 aa8.55□□□□□ -1.04
SEC22B-201ENST00000578049 PRR31Q5SQ13 230 aa8.55□□□□□ -1.04
SEC22B-201ENST00000578049 DOCK8Q8NF50 2099 aa8.55□□□□□ -1.04
SEC22B-201ENST00000578049 CEACAM8P31997 349 aaPredicted RBP8.55□□□□□ -1.04
SEC22B-201ENST00000578049 Q6ZVH6 145 aa8.55□□□□□ -1.04
SEC22B-201ENST00000578049 H3BMG7 143 aa8.54□□□□□ -1.04
SEC22B-201ENST00000578049 IGFL4Q6B9Z1 124 aa8.54□□□□□ -1.04
SEC22B-201ENST00000578049 ZNF491Q8N8L2 437 aa8.54□□□□□ -1.04
SEC22B-201ENST00000578049 ATP6V0E1O15342 81 aa8.54□□□□□ -1.04
SEC22B-201ENST00000578049 CFC1BP0CG36 223 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms