RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 SSSCA1O60232 199 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 COX7A2P2O60397 106 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 C1QBP02746 253 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 PLA2G1BP04054 148 aaKnown RBP6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 METTL15P1P0C7V9 234 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 SMIM18P0DKX4 95 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 RNASE4P34096 147 aaKnown RBP6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 ARL16Q0P5N6 197 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 ERCC8Q13216 396 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 BTN1A1Q13410 526 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 C10orf113Q5VZT2 155 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 DEFB104AQ8WTQ1 72 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 MRPL53Q96EL3 112 aaKnown RBP6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 LINC00477Q96M19 166 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 AGPAT4-IT1Q9H0P7 198 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 DNAJC4Q9NNZ3 241 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 MRPL16Q9NX20 251 aaKnown RBP6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 MGAT4CQ9UBM8 478 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 TP53TG3Q9ULZ0 132 aa6.68□□□□□ -1.34
CALCOCO2-227ENST00000575560 TRAV5A0A0B4J249 113 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 E5RGE8 158 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 M0R3E3 92 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 ZNF253O75346 499 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 MPDU1O75352 247 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 CRYGDP07320 174 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 NMBP08949 121 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 OR4E1P0C645 316 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 CRISP2P16562 243 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 TNFSF8P32971 234 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 FAUP35544 74 aaKnown RBP6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 C10orf126Q8N4M7 172 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 Q8N814 137 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 DYNC2LI1Q8TCX1 351 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 TRIM63Q969Q1 353 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 MGST2Q99735 147 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 GGACTQ9BVM4 153 aa6.67□□□□□ -1.34
CALCOCO2-227ENST00000575560 TRBV19A0A075B6N1 114 aa6.66□□□□□ -1.34
CALCOCO2-227ENST00000575560 C9orf170A2RU37 121 aa6.66□□□□□ -1.34
CALCOCO2-227ENST00000575560 TSC22D2O75157 780 aa6.66□□□□□ -1.34
CALCOCO2-227ENST00000575560 GPX1P07203 203 aa6.66□□□□□ -1.34
CALCOCO2-227ENST00000575560 SRIP30626 198 aa6.66□□□□□ -1.34
CALCOCO2-227ENST00000575560 TAS2R30P59541 319 aa6.66□□□□□ -1.34
CALCOCO2-227ENST00000575560 AP3S2P59780 193 aa6.66□□□□□ -1.34
CALCOCO2-227ENST00000575560 Q6ZQT7 251 aa6.66□□□□□ -1.34
CALCOCO2-227ENST00000575560 C9orf47Q6ZRZ4 202 aa6.66□□□□□ -1.34
CALCOCO2-227ENST00000575560 Q6ZSA8 131 aa6.66□□□□□ -1.34
CALCOCO2-227ENST00000575560 SYT8Q8NBV8 401 aa6.66□□□□□ -1.34
CALCOCO2-227ENST00000575560 IGHV1OR15-1A0A075B7D0 117 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 TRGV4A0A0C4DH28 118 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 IBA57-AS1B1ANH7 110 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 PSCAO43653 123 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 NDUFB4O95168 129 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 ORM1P02763 201 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 GYPEP15421 78 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 UBE2MP61081 183 aaKnown RBP6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 ZNF415Q09FC8 603 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 PRR9Q5T870 116 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 TOMM5Q8N4H5 51 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 ZFAND2AQ8N6M9 145 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 MCFD2Q8NI22 146 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 DEDD2Q8WXF8 326 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 ZNF479Q96JC4 524 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 SLIRPQ9GZT3 109 aaKnown RBP6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 PRELID1Q9Y255 219 aa6.65□□□□□ -1.34
CALCOCO2-227ENST00000575560 FAT3Q8TDW7 4589 aa6.64□□□□□ -1.35
CALCOCO2-227ENST00000575560 RGS13O14921 159 aa6.64□□□□□ -1.35
CALCOCO2-227ENST00000575560 SFTA3P0C7M3 94 aa6.64□□□□□ -1.35
CALCOCO2-227ENST00000575560 CAMLGP49069 296 aa6.64□□□□□ -1.35
CALCOCO2-227ENST00000575560 Q6ZRG5 221 aa6.64□□□□□ -1.35
CALCOCO2-227ENST00000575560 OR10G4Q8NGN3 311 aa6.64□□□□□ -1.35
CALCOCO2-227ENST00000575560 RAB2BQ8WUD1 216 aa6.64□□□□□ -1.35
CALCOCO2-227ENST00000575560 RASL10AQ92737 203 aa6.64□□□□□ -1.35
CALCOCO2-227ENST00000575560 TXNDC17Q9BRA2 123 aa6.64□□□□□ -1.35
CALCOCO2-227ENST00000575560 RCL1Q9Y2P8 373 aaKnown RBP6.64□□□□□ -1.35
CALCOCO2-227ENST00000575560 IGHV3-38A0A0C4DH36 116 aa6.63□□□□□ -1.35
CALCOCO2-227ENST00000575560 C7orf66A4D0T2 115 aa6.63□□□□□ -1.35
CALCOCO2-227ENST00000575560 TIRAPP58753 221 aa6.63□□□□□ -1.35
CALCOCO2-227ENST00000575560 PDE6HQ13956 83 aa6.63□□□□□ -1.35
CALCOCO2-227ENST00000575560 LINC01556Q5JQF7 62 aa6.63□□□□□ -1.35
CALCOCO2-227ENST00000575560 MIC13Q5XKP0 118 aa6.63□□□□□ -1.35
CALCOCO2-227ENST00000575560 NRARPQ7Z6K4 114 aa6.63□□□□□ -1.35
CALCOCO2-227ENST00000575560 OR1L4Q8NGR5 311 aa6.63□□□□□ -1.35
CALCOCO2-227ENST00000575560 PCNPQ8WW12 178 aaKnown RBP6.63□□□□□ -1.35
CALCOCO2-227ENST00000575560 TMEM14CQ9P0S9 112 aa6.63□□□□□ -1.35
CALCOCO2-227ENST00000575560 ZNF492Q9P255 531 aa6.63□□□□□ -1.35
CALCOCO2-227ENST00000575560 C9JCJ5 164 aa6.62□□□□□ -1.35
CALCOCO2-227ENST00000575560 OXTP01178 125 aa6.62□□□□□ -1.35
CALCOCO2-227ENST00000575560 HIST1H1EP10412 219 aaKnown RBP6.62□□□□□ -1.35
CALCOCO2-227ENST00000575560 RPL29P47914 159 aaKnown RBP6.62□□□□□ -1.35
CALCOCO2-227ENST00000575560 KRTAP10-4P60372 401 aaPredicted RBP6.62□□□□□ -1.35
CALCOCO2-227ENST00000575560 RAB31Q13636 194 aa6.62□□□□□ -1.35
CALCOCO2-227ENST00000575560 IAH1Q2TAA2 248 aaPredicted RBP6.62□□□□□ -1.35
CALCOCO2-227ENST00000575560 PYDC2Q56P42 97 aa6.62□□□□□ -1.35
CALCOCO2-227ENST00000575560 TMEM78Q5T7P6 136 aa6.62□□□□□ -1.35
CALCOCO2-227ENST00000575560 EXOC3-AS1Q8N2X6 119 aa6.62□□□□□ -1.35
CALCOCO2-227ENST00000575560 C12orf45Q8N5I9 185 aaPredicted RBP6.62□□□□□ -1.35
CALCOCO2-227ENST00000575560 PFDN5Q99471 154 aa6.62□□□□□ -1.35
CALCOCO2-227ENST00000575560 ARPC5LQ9BPX5 153 aa6.62□□□□□ -1.35
CALCOCO2-227ENST00000575560 SRRQ9GZT4 340 aa6.62□□□□□ -1.35
CALCOCO2-227ENST00000575560 TIMM9Q9Y5J7 89 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms