RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 LINC00587B1AMM8 73 aa14.6□□□□□ -0.07
SMPD3-203ENST00000563226 PSMB8P28062 276 aa14.6□□□□□ -0.07
SMPD3-203ENST00000563226 ALKBH7Q9BT30 221 aaPredicted RBP14.6□□□□□ -0.07
SMPD3-203ENST00000563226 FBLL1A6NHQ2 334 aaKnown RBP14.59□□□□□ -0.07
SMPD3-203ENST00000563226 CD33P20138 364 aa14.59□□□□□ -0.07
SMPD3-203ENST00000563226 DNLZQ5SXM8 178 aa14.59□□□□□ -0.07
SMPD3-203ENST00000563226 GPHB5Q86YW7 130 aa14.59□□□□□ -0.07
SMPD3-203ENST00000563226 HAX1O00165 279 aa14.59□□□□□ -0.07
SMPD3-203ENST00000563226 Q6ZWC4 215 aa14.59□□□□□ -0.07
SMPD3-203ENST00000563226 TPPP3Q9BW30 176 aa14.59□□□□□ -0.07
SMPD3-203ENST00000563226 NPFFR1Q9GZQ6 430 aa14.59□□□□□ -0.07
SMPD3-203ENST00000563226 HOXA3O43365 443 aaPredicted RBP14.58□□□□□ -0.08
SMPD3-203ENST00000563226 SELENOKQ9Y6D0 94 aa14.58□□□□□ -0.08
SMPD3-203ENST00000563226 A0A1W2PS18 150 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 TMEM189A5PLL7 270 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 PLA2G2AP14555 144 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 EDN2P20800 178 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 PAFAH1B2P68402 229 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 IL17RELQ6ZVW7 336 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 KCNS1Q96KK3 526 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 C20orf173Q96LM9 149 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 SAMD10Q9BYL1 202 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 AGPAT4-IT1Q9H0P7 198 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 A0A1B0GUT8 65 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 RBAKDNA6NC62 111 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 TM4SF20Q53R12 229 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 C16orf92Q96LL3 132 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 RNF114Q9Y508 228 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 ITPR3Q14573 2671 aa14.57□□□□□ -0.08
SMPD3-203ENST00000563226 FAM209BQ5JX69 171 aa14.56□□□□□ -0.08
SMPD3-203ENST00000563226 CYB5R2Q6BCY4 276 aa14.56□□□□□ -0.08
SMPD3-203ENST00000563226 PRSS57Q6UWY2 283 aa14.56□□□□□ -0.08
SMPD3-203ENST00000563226 ZNF575Q86XF7 245 aa14.56□□□□□ -0.08
SMPD3-203ENST00000563226 WFDC11Q8NEX6 87 aa14.56□□□□□ -0.08
SMPD3-203ENST00000563226 PEF1Q9UBV8 284 aaKnown RBP14.56□□□□□ -0.08
SMPD3-203ENST00000563226 KLF5Q13887 457 aaPredicted RBP14.56□□□□□ -0.08
SMPD3-203ENST00000563226 MRPL53Q96EL3 112 aaKnown RBP14.56□□□□□ -0.08
SMPD3-203ENST00000563226 NDFIP1Q9BT67 221 aa14.56□□□□□ -0.08
SMPD3-203ENST00000563226 ZNF702PQ9H963 129 aa14.56□□□□□ -0.08
SMPD3-203ENST00000563226 GPX1P07203 203 aa14.55□□□□□ -0.08
SMPD3-203ENST00000563226 PMCHP20382 165 aa14.55□□□□□ -0.08
SMPD3-203ENST00000563226 DUX5Q96PT3 197 aa14.55□□□□□ -0.08
SMPD3-203ENST00000563226 RPLP1P05386 114 aaKnown RBP14.54□□□□□ -0.08
SMPD3-203ENST00000563226 LYZL1Q6UWQ5 148 aa14.54□□□□□ -0.08
SMPD3-203ENST00000563226 PSMG3-AS1Q96PY0 264 aa14.54□□□□□ -0.08
SMPD3-203ENST00000563226 IGHV7-4-1A0A0J9YVY3 117 aa14.54□□□□□ -0.08
SMPD3-203ENST00000563226 SOCS3O14543 225 aa14.54□□□□□ -0.08
SMPD3-203ENST00000563226 ZNF705DP0CH99 300 aaPredicted RBP14.54□□□□□ -0.08
SMPD3-203ENST00000563226 ZNF705BP0CI00 300 aaPredicted RBP14.54□□□□□ -0.08
SMPD3-203ENST00000563226 SSTP61278 116 aa14.54□□□□□ -0.08
SMPD3-203ENST00000563226 FAM19A2Q8N3H0 131 aa14.54□□□□□ -0.08
SMPD3-203ENST00000563226 LOC102724200A0A096LPH7 203 aaPredicted RBP14.53□□□□□ -0.08
SMPD3-203ENST00000563226 MUC21A0A0G2JKD1 596 aa14.53□□□□□ -0.08
SMPD3-203ENST00000563226 MUC21A0A140T8X8 626 aa14.53□□□□□ -0.08
SMPD3-203ENST00000563226 BMI1P35226 326 aa14.53□□□□□ -0.08
SMPD3-203ENST00000563226 AMTP48728 403 aa14.53□□□□□ -0.08
SMPD3-203ENST00000563226 RIGQ13278 110 aa14.53□□□□□ -0.08
SMPD3-203ENST00000563226 MUC21Q5SSG8 566 aa14.53□□□□□ -0.08
SMPD3-203ENST00000563226 RHPN1-AS1Q9BWJ2 59 aa14.53□□□□□ -0.08
SMPD3-203ENST00000563226 PRO1933Q9H354 126 aa14.53□□□□□ -0.08
SMPD3-203ENST00000563226 ZNF324O75467 553 aaPredicted RBP14.53□□□□□ -0.08
SMPD3-203ENST00000563226 SCGB1D1O95968 90 aa14.53□□□□□ -0.08
SMPD3-203ENST00000563226 DEFB1P60022 68 aa14.53□□□□□ -0.08
SMPD3-203ENST00000563226 Q6AWC8 147 aa14.53□□□□□ -0.08
SMPD3-203ENST00000563226 SIGLECL1Q8N7X8 197 aa14.53□□□□□ -0.08
SMPD3-203ENST00000563226 URB1-AS1Q96HZ7 61 aa14.53□□□□□ -0.08
SMPD3-203ENST00000563226 DAZ1Q9NQZ3 744 aaKnown RBP14.53□□□□□ -0.08
SMPD3-203ENST00000563226 IGKV3-7A0A075B6H7 116 aa14.52□□□□□ -0.09
SMPD3-203ENST00000563226 J3QKU1 62 aa14.52□□□□□ -0.09
SMPD3-203ENST00000563226 M0QZ24 198 aa14.52□□□□□ -0.09
SMPD3-203ENST00000563226 ZNF138P52744 262 aa14.52□□□□□ -0.09
SMPD3-203ENST00000563226 TMEM78Q5T7P6 136 aa14.52□□□□□ -0.09
SMPD3-203ENST00000563226 TLN2Q9Y4G6 2542 aa14.52□□□□□ -0.09
SMPD3-203ENST00000563226 TMEM213A2RRL7 107 aa14.51□□□□□ -0.09
SMPD3-203ENST00000563226 C9orf47Q6ZRZ4 202 aa14.51□□□□□ -0.09
SMPD3-203ENST00000563226 GATD1Q8NB37 220 aa14.51□□□□□ -0.09
SMPD3-203ENST00000563226 ZNF738Q8NE65 137 aa14.51□□□□□ -0.09
SMPD3-203ENST00000563226 FABP5P3A8MUU1 101 aa14.51□□□□□ -0.09
SMPD3-203ENST00000563226 ORM1P02763 201 aa14.51□□□□□ -0.09
SMPD3-203ENST00000563226 RPL11P62913 178 aaKnown RBP14.51□□□□□ -0.09
SMPD3-203ENST00000563226 NRN1Q9NPD7 142 aa14.51□□□□□ -0.09
SMPD3-203ENST00000563226 NAGKQ9UJ70 344 aa14.51□□□□□ -0.09
SMPD3-203ENST00000563226 PDZD2O15018 2839 aa14.5□□□□□ -0.09
SMPD3-203ENST00000563226 TMEM89A2RUT3 159 aa14.5□□□□□ -0.09
SMPD3-203ENST00000563226 Q6ZQT7 251 aa14.5□□□□□ -0.09
SMPD3-203ENST00000563226 NIT1Q86X76 327 aa14.5□□□□□ -0.09
SMPD3-203ENST00000563226 C11orf21Q9P2W6 132 aa14.5□□□□□ -0.09
SMPD3-203ENST00000563226 SMPXQ9UHP9 88 aa14.5□□□□□ -0.09
SMPD3-203ENST00000563226 IGLC6P0CF74 106 aa14.5□□□□□ -0.09
SMPD3-203ENST00000563226 NTF3P20783 257 aa14.5□□□□□ -0.09
SMPD3-203ENST00000563226 RNASEKQ6P5S7 137 aaKnown RBP14.5□□□□□ -0.09
SMPD3-203ENST00000563226 ZNF664Q8N3J9 261 aa14.5□□□□□ -0.09
SMPD3-203ENST00000563226 SRD5A1P18405 259 aa14.49□□□□□ -0.09
SMPD3-203ENST00000563226 BORCS7Q96B45 105 aa14.49□□□□□ -0.09
SMPD3-203ENST00000563226 CCDC168Q8NDH2 2452 aa14.48□□□□□ -0.09
SMPD3-203ENST00000563226 FAM181BA6NEQ2 426 aa14.48□□□□□ -0.09
SMPD3-203ENST00000563226 CTRLP40313 264 aa14.48□□□□□ -0.09
SMPD3-203ENST00000563226 RPS20P60866 119 aaKnown RBP14.48□□□□□ -0.09
SMPD3-203ENST00000563226 SRSF2Q01130 221 aaKnown RBP14.48□□□□□ -0.09
SMPD3-203ENST00000563226 FAM106AQ4KMX7 169 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms