RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 TGFAP01135 160 aa15.12■□□□□ 0.01
SEMA4B-215ENST00000560089 TNCP24821 2201 aa15.12■□□□□ 0.01
SEMA4B-215ENST00000560089 TRAV25A0A0B4J276 109 aa15.12■□□□□ 0.01
SEMA4B-215ENST00000560089 CHD8Q9HCK8 2581 aa15.11■□□□□ 0.01
SEMA4B-215ENST00000560089 IGHV3-48P01763 117 aa15.11■□□□□ 0.01
SEMA4B-215ENST00000560089 ATP5IP56385 69 aaPredicted RBP15.11■□□□□ 0.01
SEMA4B-215ENST00000560089 ADIPOQQ15848 244 aa15.11■□□□□ 0.01
SEMA4B-215ENST00000560089 GOLT1AQ6ZVE7 132 aa15.11■□□□□ 0.01
SEMA4B-215ENST00000560089 CXorf67Q86X51 503 aaPredicted RBP15.11■□□□□ 0.01
SEMA4B-215ENST00000560089 METRNQ9UJH8 293 aa15.11■□□□□ 0.01
SEMA4B-215ENST00000560089 SCGB1C2P0DMR2 95 aa15.11■□□□□ 0.01
SEMA4B-215ENST00000560089 ZNF134P52741 427 aa15.11■□□□□ 0.01
SEMA4B-215ENST00000560089 NPIPB3Q92617 1050 aa15.11■□□□□ 0.01
SEMA4B-215ENST00000560089 DNAJC30Q96LL9 226 aa15.11■□□□□ 0.01
SEMA4B-215ENST00000560089 MRPL35Q9NZE8 188 aaKnown RBP15.11■□□□□ 0.01
SEMA4B-215ENST00000560089 SMIM9A6NGZ8 99 aa15.1■□□□□ 0.01
SEMA4B-215ENST00000560089 LINC01619G3V211 115 aa15.1■□□□□ 0.01
SEMA4B-215ENST00000560089 K7EM74 188 aa15.1■□□□□ 0.01
SEMA4B-215ENST00000560089 TBC1D28Q2M2D7 210 aa15.1■□□□□ 0.01
SEMA4B-215ENST00000560089 TMEM78Q5T7P6 136 aa15.1■□□□□ 0.01
SEMA4B-215ENST00000560089 C1orf229Q6ZS94 237 aaPredicted RBP15.1■□□□□ 0.01
SEMA4B-215ENST00000560089 CALYQ9NYX4 217 aa15.1■□□□□ 0.01
SEMA4B-215ENST00000560089 DOCK7Q96N67 2140 aa15.1■□□□□ 0.01
SEMA4B-215ENST00000560089 RP1L1Q8IWN7 2480 aaPredicted RBP15.1■□□□□ 0.01
SEMA4B-215ENST00000560089 ZNF826PQ6ZT77 177 aa15.1■□□□□ 0.01
SEMA4B-215ENST00000560089 ASCL2Q99929 193 aa15.1■□□□□ 0.01
SEMA4B-215ENST00000560089 PROCRQ9UNN8 238 aa15.1■□□□□ 0.01
SEMA4B-215ENST00000560089 ZNF785A8K8V0 405 aa15.09■□□□□ 0.01
SEMA4B-215ENST00000560089 LYZL1Q6UWQ5 148 aa15.09■□□□□ 0.01
SEMA4B-215ENST00000560089 CEACAM4O75871 244 aa15.09■□□□□ 0.01
SEMA4B-215ENST00000560089 GLRXP35754 106 aa15.09■□□□□ 0.01
SEMA4B-215ENST00000560089 NCOR2Q9Y618 2525 aa15.08■□□□□ 0.01
SEMA4B-215ENST00000560089 LINC00694P0DN24 101 aa15.08■□□□□ 0.01
SEMA4B-215ENST00000560089 FAM90A1Q86YD7 464 aa15.08■□□□□ 0.01
SEMA4B-215ENST00000560089 LINC01587Q99440 93 aa15.08■□□□□ 0.01
SEMA4B-215ENST00000560089 TRGV9Q99603 122 aa15.08■□□□□ 0.01
SEMA4B-215ENST00000560089 IGLV2-11P01706 119 aa15.08■□□□□ 0
SEMA4B-215ENST00000560089 SPRR3Q9UBC9 169 aa15.07■□□□□ 0
SEMA4B-215ENST00000560089 A0A1W2PPI3 338 aa15.07■□□□□ 0
SEMA4B-215ENST00000560089 UPK2O00526 184 aa15.07■□□□□ 0
SEMA4B-215ENST00000560089 SPRNQ5BIV9 151 aa15.07■□□□□ 0
SEMA4B-215ENST00000560089 C15orf53Q8NAA6 179 aa15.07■□□□□ 0
SEMA4B-215ENST00000560089 OR11H6Q8NGC7 330 aa15.07■□□□□ 0
SEMA4B-215ENST00000560089 RAXQ9Y2V3 346 aa15.07■□□□□ 0
SEMA4B-215ENST00000560089 NDUFA3O95167 84 aa15.06■□□□□ 0
SEMA4B-215ENST00000560089 LINC01559Q495D7 138 aa15.06■□□□□ 0
SEMA4B-215ENST00000560089 IGKV1D-37A0A075B6S9 117 aa15.06■□□□□ 0
SEMA4B-215ENST00000560089 LOC107984640A0A0U1RRK4 108 aa15.06■□□□□ 0
SEMA4B-215ENST00000560089 LEAP2Q969E1 77 aa15.06■□□□□ 0
SEMA4B-215ENST00000560089 UBTD1Q9HAC8 227 aa15.06■□□□□ 0
SEMA4B-215ENST00000560089 TNFRSF1AP19438 455 aa15.05■□□□□ 0
SEMA4B-215ENST00000560089 UBE2D1P51668 147 aa15.05■□□□□ 0
SEMA4B-215ENST00000560089 TUSC5Q8IXB3 177 aa15.05■□□□□ 0
SEMA4B-215ENST00000560089 AAMDCQ9H7C9 122 aa15.05■□□□□ 0
SEMA4B-215ENST00000560089 C21orf62Q9NYP8 219 aa15.05■□□□□ 0
SEMA4B-215ENST00000560089 PIEZO1Q92508 2521 aa15.05■□□□□ -0
SEMA4B-215ENST00000560089 WIPF1O43516 503 aa15.05■□□□□ -0
SEMA4B-215ENST00000560089 SLC25A20O43772 301 aa15.05■□□□□ -0
SEMA4B-215ENST00000560089 GP9P14770 177 aa15.05■□□□□ -0
SEMA4B-215ENST00000560089 CHCHD5Q9BSY4 110 aa15.05■□□□□ -0
SEMA4B-215ENST00000560089 TRGV5A0A0B4J1U4 118 aa15.04■□□□□ -0
SEMA4B-215ENST00000560089 OTORQ9NRC9 128 aa15.04■□□□□ -0
SEMA4B-215ENST00000560089 EXOC3-AS1Q8N2X6 119 aa15.04■□□□□ -0
SEMA4B-215ENST00000560089 ERHP84090 104 aaKnown RBP15.03■□□□□ -0
SEMA4B-215ENST00000560089 PRR7Q8TB68 274 aa15.03■□□□□ -0
SEMA4B-215ENST00000560089 NBEAQ8NFP9 2946 aa15.03■□□□□ -0
SEMA4B-215ENST00000560089 SAA2P0DJI9 122 aaPredicted RBP15.03■□□□□ -0
SEMA4B-215ENST00000560089 POU2AF1Q16633 256 aa15.03■□□□□ -0
SEMA4B-215ENST00000560089 ODF3Q96PU9 254 aa15.03■□□□□ -0
SEMA4B-215ENST00000560089 RPL7P18124 248 aaKnown RBP15.02■□□□□ -0
SEMA4B-215ENST00000560089 LGALS1P09382 135 aaKnown RBP15.02■□□□□ -0
SEMA4B-215ENST00000560089 PRB4P10163 310 aaPredicted RBP15.02■□□□□ -0
SEMA4B-215ENST00000560089 CRIP1P50238 77 aa15.02■□□□□ -0
SEMA4B-215ENST00000560089 SRSF9Q13242 221 aaKnown RBP eCLIP15.02■□□□□ -0
SEMA4B-215ENST00000560089 PTPRQQ9UMZ3 2332 aa15.02□□□□□ -0.01
SEMA4B-215ENST00000560089 TRAV8-4A0A0B4J246 113 aa15.02□□□□□ -0.01
SEMA4B-215ENST00000560089 C9JAW5 83 aa15.02□□□□□ -0.01
SEMA4B-215ENST00000560089 LOXL3P58215 753 aa15.02□□□□□ -0.01
SEMA4B-215ENST00000560089 UTF1Q5T230 341 aa15.01□□□□□ -0.01
SEMA4B-215ENST00000560089 OBP2BQ9NPH6 170 aa15.01□□□□□ -0.01
SEMA4B-215ENST00000560089 NXT2Q9NPJ8 142 aaKnown RBP15.01□□□□□ -0.01
SEMA4B-215ENST00000560089 MRPL36Q9P0J6 103 aaKnown RBP15.01□□□□□ -0.01
SEMA4B-215ENST00000560089 ONECUT1Q9UBC0 465 aa15.01□□□□□ -0.01
SEMA4B-215ENST00000560089 RELNP78509 3460 aa15.01□□□□□ -0.01
SEMA4B-215ENST00000560089 TRAV17A0A0B4J275 112 aa15.01□□□□□ -0.01
SEMA4B-215ENST00000560089 PLNP26678 52 aa15.01□□□□□ -0.01
SEMA4B-215ENST00000560089 IGFL2Q6UWQ7 119 aa15.01□□□□□ -0.01
SEMA4B-215ENST00000560089 THAP8Q8NA92 274 aa15.01□□□□□ -0.01
SEMA4B-215ENST00000560089 LINC01546A6NGU7 62 aa15□□□□□ -0.01
SEMA4B-215ENST00000560089 INTS1Q8N201 2190 aaKnown RBP15□□□□□ -0.01
SEMA4B-215ENST00000560089 FAM57AQ8TBR7 257 aa15□□□□□ -0.01
SEMA4B-215ENST00000560089 MYOZ3Q8TDC0 251 aa15□□□□□ -0.01
SEMA4B-215ENST00000560089 HOXB4P17483 251 aaPredicted RBP14.99□□□□□ -0.01
SEMA4B-215ENST00000560089 MRPL23Q16540 153 aaKnown RBP14.99□□□□□ -0.01
SEMA4B-215ENST00000560089 Q8N1Y9 231 aa14.99□□□□□ -0.01
SEMA4B-215ENST00000560089 SSUH2Q9Y2M2 353 aa14.99□□□□□ -0.01
SEMA4B-215ENST00000560089 TRBV6-1A0A0K0K1D8 114 aa14.99□□□□□ -0.01
SEMA4B-215ENST00000560089 TMEM155Q4W5P6 130 aa14.99□□□□□ -0.01
SEMA4B-215ENST00000560089 FAM19A5Q7Z5A7 132 aaPredicted RBP14.99□□□□□ -0.01
SEMA4B-215ENST00000560089 C11orf53Q8IXP5 236 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms