RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 TRAV34A0A0B4J273 112 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 OR11H12B2RN74 326 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 NPIPB6E9PJ23 425 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 PEX7O00628 323 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 GIG44P09565 113 aaPredicted RBP6.9□□□□□ -1.3
HERC1-206ENST00000559996 CT45A10P0DMU9 189 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 HLA-DRB4P13762 266 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 TAGLN2P37802 199 aaKnown RBP6.9□□□□□ -1.3
HERC1-206ENST00000559996 CMC4P56277 68 aaPredicted RBP6.9□□□□□ -1.3
HERC1-206ENST00000559996 FOXI2Q6ZQN5 318 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 GOLT1AQ6ZVE7 132 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 ZNF738Q8NE65 137 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 HIST1H2BAQ96A08 127 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 SGK494Q96LW2 274 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 ASCL2Q99929 193 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 ATG101Q9BSB4 218 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 DERL1Q9BUN8 251 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 EIF5A2Q9GZV4 153 aaKnown RBP6.9□□□□□ -1.3
HERC1-206ENST00000559996 HLA-DRB4X5D2U9 266 aa6.9□□□□□ -1.3
HERC1-206ENST00000559996 MGAM2Q2M2H8 2515 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 TRBV20OR9-2A0A075B6H5 130 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 TMEM250H0YL14 139 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 IFNA1P01562 189 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 IGLV2-8P01709 118 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 CNN1P51911 297 aaKnown RBP6.89□□□□□ -1.31
HERC1-206ENST00000559996 KIR3DS1Q14943 382 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 TMEM183BQ1AE95 376 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 TRPT1Q86TN4 253 aaKnown RBP6.89□□□□□ -1.31
HERC1-206ENST00000559996 COMMD7Q86VX2 200 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 SLC7A5P1Q8MH63 180 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 CYB561D1Q8N8Q1 229 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 LINC00477Q96M19 166 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 CLUHP3Q96NS8 147 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 TCEAL7Q9BRU2 100 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 SMDT1Q9H4I9 107 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 ZNF492Q9P255 531 aa6.89□□□□□ -1.31
HERC1-206ENST00000559996 TRBV6-1A0A0K0K1D8 114 aa6.88□□□□□ -1.31
HERC1-206ENST00000559996 A8MZ25 164 aa6.88□□□□□ -1.31
HERC1-206ENST00000559996 F6UZH7 168 aa6.88□□□□□ -1.31
HERC1-206ENST00000559996 K7EIL1 84 aa6.88□□□□□ -1.31
HERC1-206ENST00000559996 CRXO43186 299 aaPredicted RBP6.88□□□□□ -1.31
HERC1-206ENST00000559996 PDE6DO43924 150 aa6.88□□□□□ -1.31
HERC1-206ENST00000559996 PRB2P02812 416 aaPredicted RBP6.88□□□□□ -1.31
HERC1-206ENST00000559996 PEA15Q15121 130 aa6.88□□□□□ -1.31
HERC1-206ENST00000559996 ACTL10Q5JWF8 245 aa6.88□□□□□ -1.31
HERC1-206ENST00000559996 Q6ZQT7 251 aa6.88□□□□□ -1.31
HERC1-206ENST00000559996 TMEM75Q8N9X5 138 aa6.88□□□□□ -1.31
HERC1-206ENST00000559996 CMTM2Q8TAZ6 248 aa6.88□□□□□ -1.31
HERC1-206ENST00000559996 IGF2BP2-AS1Q96M15 143 aa6.88□□□□□ -1.31
HERC1-206ENST00000559996 MLST8Q9BVC4 326 aa6.88□□□□□ -1.31
HERC1-206ENST00000559996 AURKAIP1Q9NWT8 199 aaPredicted RBP6.88□□□□□ -1.31
HERC1-206ENST00000559996 RPH3ALQ9UNE2 315 aa6.88□□□□□ -1.31
HERC1-206ENST00000559996 PSG8Q9UQ74 426 aa6.88□□□□□ -1.31
HERC1-206ENST00000559996 SERTM2A0A1B0GWG4 89 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 LTAP01374 205 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 IGHV4-30-4P0DP06 118 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 CRISP2P16562 243 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 ADCYAP1P18509 176 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 RPL35P42766 123 aaKnown RBP6.87□□□□□ -1.31
HERC1-206ENST00000559996 CSN1S1P47710 185 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 CRIP1P50238 77 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 FLI1Q01543 452 aaPredicted RBP6.87□□□□□ -1.31
HERC1-206ENST00000559996 HIST1H1AQ02539 215 aaPredicted RBP6.87□□□□□ -1.31
HERC1-206ENST00000559996 PRR9Q5T870 116 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 UQCC3Q6UW78 93 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 COX8CQ7Z4L0 72 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 GTSCR1Q86UQ5 136 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 ZNF575Q86XF7 245 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 ZFAND2AQ8N6M9 145 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 SLC35B3Q9H1N7 401 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 PARLQ9H300 379 aa6.87□□□□□ -1.31
HERC1-206ENST00000559996 NBEAL1Q6ZS30 2694 aa6.86□□□□□ -1.31
HERC1-206ENST00000559996 TMEM218A2RU14 115 aa6.86□□□□□ -1.31
HERC1-206ENST00000559996 DUSP14O95147 198 aaKnown RBP6.86□□□□□ -1.31
HERC1-206ENST00000559996 ZNF80P51504 273 aaPredicted RBP6.86□□□□□ -1.31
HERC1-206ENST00000559996 ZNF138P52744 262 aa6.86□□□□□ -1.31
HERC1-206ENST00000559996 TAS2R60P59551 318 aa6.86□□□□□ -1.31
HERC1-206ENST00000559996 EBLN2Q6P2I7 272 aa6.86□□□□□ -1.31
HERC1-206ENST00000559996 CSNK1G2-AS1Q8NCQ2 148 aa6.86□□□□□ -1.31
HERC1-206ENST00000559996 OR4B1Q8NGF8 309 aa6.86□□□□□ -1.31
HERC1-206ENST00000559996 OR10J6PQ8NGY7 276 aa6.86□□□□□ -1.31
HERC1-206ENST00000559996 Q8TAT8 98 aa6.86□□□□□ -1.31
HERC1-206ENST00000559996 FMC1Q96HJ9 113 aa6.86□□□□□ -1.31
HERC1-206ENST00000559996 C8orf49Q96NF6 230 aa6.86□□□□□ -1.31
HERC1-206ENST00000559996 ODF3Q96PU9 254 aa6.86□□□□□ -1.31
HERC1-206ENST00000559996 SRD5A3Q9H8P0 318 aa6.86□□□□□ -1.31
HERC1-206ENST00000559996 ZMAT5Q9UDW3 170 aaKnown RBP6.86□□□□□ -1.31
HERC1-206ENST00000559996 NOTCH1P46531 2555 aa6.86□□□□□ -1.31
HERC1-206ENST00000559996 TRBV7-9A0A0J9YWB2 115 aa6.85□□□□□ -1.31
HERC1-206ENST00000559996 PGPEP1LA6NFU8 196 aa6.85□□□□□ -1.31
HERC1-206ENST00000559996 KLLNB2CW77 178 aa6.85□□□□□ -1.31
HERC1-206ENST00000559996 ZNF324O75467 553 aaPredicted RBP6.85□□□□□ -1.31
HERC1-206ENST00000559996 IGKV3-20P01619 116 aa6.85□□□□□ -1.31
HERC1-206ENST00000559996 RBMY1A1P0DJD3 496 aaKnown RBP6.85□□□□□ -1.31
HERC1-206ENST00000559996 RBMY1CP0DJD4 496 aa6.85□□□□□ -1.31
HERC1-206ENST00000559996 AKR1C3P42330 323 aa6.85□□□□□ -1.31
HERC1-206ENST00000559996 FXYD7P58549 80 aa6.85□□□□□ -1.31
HERC1-206ENST00000559996 RBMY1FQ15415 496 aaKnown RBP6.85□□□□□ -1.31
HERC1-206ENST00000559996 C10orf91Q5T1B1 145 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms