RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ZMAT5Q9UDW3 170 aaKnown RBP6.25□□□□□ -1.41
SMAD3-212ENST00000559937 C2orf70A6NJV1 201 aa6.24□□□□□ -1.41
SMAD3-212ENST00000559937 FABP5P3A8MUU1 101 aa6.24□□□□□ -1.41
SMAD3-212ENST00000559937 CRXO43186 299 aaPredicted RBP6.24□□□□□ -1.41
SMAD3-212ENST00000559937 LINC00614P0C842 121 aa6.24□□□□□ -1.41
SMAD3-212ENST00000559937 IGLC6P0CF74 106 aa6.24□□□□□ -1.41
SMAD3-212ENST00000559937 SLC25A16P16260 332 aa6.24□□□□□ -1.41
SMAD3-212ENST00000559937 Q71RC1 249 aaPredicted RBP6.24□□□□□ -1.41
SMAD3-212ENST00000559937 ASCL2Q99929 193 aa6.24□□□□□ -1.41
SMAD3-212ENST00000559937 TMEM70Q9BUB7 260 aa6.24□□□□□ -1.41
SMAD3-212ENST00000559937 CNFNQ9BYD5 112 aa6.24□□□□□ -1.41
SMAD3-212ENST00000559937 PAM16Q9Y3D7 125 aa6.24□□□□□ -1.41
SMAD3-212ENST00000559937 LENEPQ9Y5L5 61 aa6.24□□□□□ -1.41
SMAD3-212ENST00000559937 U3KQK5 164 aa6.24□□□□□ -1.41
SMAD3-212ENST00000559937 CCDC168Q8NDH2 2452 aa6.24□□□□□ -1.41
SMAD3-212ENST00000559937 POLQO75417 2590 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 LINC01548A6NM66 108 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 B4DSR2 109 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 NDUFA4O00483 81 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 TRGV3P03979 118 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 RNF224P0DH78 156 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 HIST1H1AQ02539 215 aaPredicted RBP6.23□□□□□ -1.41
SMAD3-212ENST00000559937 LINC01559Q495D7 138 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 SPATA45Q537H7 98 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 FAM104BQ5XKR9 115 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 EBLN2Q6P2I7 272 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 LYZL1Q6UWQ5 148 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 C9orf139Q6ZV77 190 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 FER1L6-AS1Q8NA97 138 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 VGLL1Q99990 258 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 UQCR10Q9UDW1 63 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 SPG11Q96JI7 2443 aa6.23□□□□□ -1.41
SMAD3-212ENST00000559937 MED13LQ71F56 2210 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 IGHV4-30-2A0A087WSY4 118 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 TRAV9-2A0A087WT02 112 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 IGHV1-24A0A0C4DH33 117 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 J3QLI3 93 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 EREGO14944 169 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 PPIFP30405 207 aaKnown RBP6.22□□□□□ -1.41
SMAD3-212ENST00000559937 ARL3P36405 182 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 ZNF138P52744 262 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 SSTP61278 116 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 TDRG1Q3Y452 100 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 PET117Q6UWS5 81 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 ZNF705AQ6ZN79 300 aaPredicted RBP6.22□□□□□ -1.41
SMAD3-212ENST00000559937 C9orf47Q6ZRZ4 202 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 TMEM219Q86XT9 240 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 LINC00469Q8N7U9 141 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 GLMPQ8WWB7 406 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 SNHG12Q9BXW3 62 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 TMEM191AQ9H0A3 160 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 HSPB8Q9UJY1 196 aa6.22□□□□□ -1.41
SMAD3-212ENST00000559937 TEP1Q99973 2627 aaKnown RBP6.22□□□□□ -1.41
SMAD3-212ENST00000559937 APCP25054 2843 aa6.21□□□□□ -1.41
SMAD3-212ENST00000559937 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.21□□□□□ -1.414e-7■■■□□ 17.7
SMAD3-212ENST00000559937 TRAV8-2A0A0B4J237 113 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 IGHV3-35A0A0C4DH35 117 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 A0A0G2JLM5 398 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 TMEM89A2RUT3 159 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 H3BUX3 64 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 LEPROTL1O95214 131 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 PPBPP02775 128 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 IGLC3P0DOY3 106 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 IGHV4-38-2P0DP08 117 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 HLA-DMBP28068 263 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 ZNF80P51504 273 aaPredicted RBP6.21□□□□□ -1.42
SMAD3-212ENST00000559937 TMEM78Q5T7P6 136 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 BRD3OSQ6XYD6 125 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 C8orf86Q6ZUL3 223 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 FA2HQ7L5A8 372 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 ORMDL3Q8N138 153 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 OR10AG1Q8NH19 301 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 Q8TAT8 98 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 NPFFR1Q9GZQ6 430 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 AP5S1Q9NUS5 200 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 LAMTOR2Q9Y2Q5 125 aa6.21□□□□□ -1.42
SMAD3-212ENST00000559937 IGHV3OR16-10A0A075B7F0 116 aa6.2□□□□□ -1.42
SMAD3-212ENST00000559937 TRBV7-9A0A0J9YWB2 115 aa6.2□□□□□ -1.42
SMAD3-212ENST00000559937 A0A1B0GV90 55 aa6.2□□□□□ -1.42
SMAD3-212ENST00000559937 SYS1-DBNDD2H3BUS1 97 aa6.2□□□□□ -1.42
SMAD3-212ENST00000559937 IGLV1-40P01703 118 aa6.2□□□□□ -1.42
SMAD3-212ENST00000559937 NUTF2P61970 127 aaKnown RBP6.2□□□□□ -1.42
SMAD3-212ENST00000559937 HIST2H2BCQ6DN03 193 aa6.2□□□□□ -1.42
SMAD3-212ENST00000559937 SPATA12Q7Z6I5 190 aa6.2□□□□□ -1.42
SMAD3-212ENST00000559937 PRSS3P2Q8NHM4 247 aa6.2□□□□□ -1.42
SMAD3-212ENST00000559937 LINC00477Q96M19 166 aa6.2□□□□□ -1.42
SMAD3-212ENST00000559937 PRELID3AQ96N28 172 aa6.2□□□□□ -1.42
SMAD3-212ENST00000559937 MAP1LC3CQ9BXW4 147 aa6.2□□□□□ -1.42
SMAD3-212ENST00000559937 ST20Q9HBF5 79 aa6.2□□□□□ -1.42
SMAD3-212ENST00000559937 AKAP6Q13023 2319 aa6.2□□□□□ -1.42
SMAD3-212ENST00000559937 MTORP42345 2549 aa6.2□□□□□ -1.42
SMAD3-212ENST00000559937 IGHV3OR16-8A0A075B7F1 116 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 TMSB15BA0A087X1C1 80 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 A1L4Q6 167 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 TMEM213A2RRL7 107 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 OR4C46A6NHA9 309 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 PRAC2D3DTV9 90 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 OVOL1O14753 267 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 ORM1P02763 201 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 CFHR3Q02985 330 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms