RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 ITLN2Q8WWU7 325 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-248ENST00000558190 TIMM21Q9BVV7 248 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 PRR20EP86478 221 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 PRR20CP86479 221 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 PRR20DP86480 221 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 PRR20BP86481 221 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 PRR20AP86496 221 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 LOXL1Q08397 574 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-248ENST00000558190 LYPD2Q6UXB3 125 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 C1orf159Q96HA4 380 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 FAM167A-AS1Q96KT0 104 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 NWD2Q9ULI1 1742 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 CLEC2BQ92478 149 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 C11orf52Q96A22 123 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 UBR1Q8IWV7 1749 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 ZNF831Q5JPB2 1677 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 C15orf65H3BRN8 121 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 TMEM219Q86XT9 240 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 BRK1Q8WUW1 75 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 LINC00527Q9UJ94 153 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 TMEM14BQ9NUH8 114 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 SEC61GP60059 68 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 NREPQ16612 68 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 PIFOQ8TCI5 191 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 PRIMA1Q86XR5 153 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 ARHGEF28Q8N1W1 1705 aaKnown RBP2.93□□□□□ -1.94
ATXN3-248ENST00000558190 TRAV4A0A0B4J268 109 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 C11orf53Q8IXP5 236 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 SLC22A18ASQ8N1D0 253 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 JMJD1CQ15652 2540 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 PMAIP1Q13794 54 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 LINC00322Q6ZN03 302 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-248ENST00000558190 WDR86Q86TI4 376 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 SLC25A29Q8N8R3 303 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 A0A0J9YXV3 536 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 RPL32P62910 135 aaKnown RBP2.93□□□□□ -1.94
ATXN3-248ENST00000558190 OVOL2Q9BRP0 275 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 C7orf69Q9H7B7 122 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 PRR30Q53SZ7 412 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-248ENST00000558190 PEAK1Q9H792 1746 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 TMEM30BQ3MIR4 351 aa2.93□□□□□ -1.94
ATXN3-248ENST00000558190 SCN5AQ14524 2016 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 XRN1Q8IZH2 1706 aaKnown RBP2.92□□□□□ -1.94
ATXN3-248ENST00000558190 CLPSP04118 112 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 HTN3P15516 51 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 C5orf64Q2M2E5 130 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 Q9HAA7 133 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 M0R1W7 72 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 C8orf31Q8N9H6 132 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 TRBV7-1A0A0A6YYK4 115 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 UQCRQO14949 82 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 HOXD3P31249 432 aaPredicted RBP2.92□□□□□ -1.94
ATXN3-248ENST00000558190 MON2Q7Z3U7 1717 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 TRGV11A0A075B6L2 103 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 BAZ2AQ9UIF9 1905 aaKnown RBP2.92□□□□□ -1.94
ATXN3-248ENST00000558190 MRC1P22897 1456 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 MED1Q15648 1581 aaPredicted RBP2.92□□□□□ -1.94
ATXN3-248ENST00000558190 NBL1P41271 181 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 RHPN1-AS1Q9BWJ2 59 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 LRRC75A-AS1Q8N1F1 130 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 MARF1Q9Y4F3 1742 aaKnown RBP2.92□□□□□ -1.94
ATXN3-248ENST00000558190 ATP1A1-AS1Q5TC04 95 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 NBR2O15453 112 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 CMC4P56277 68 aaPredicted RBP2.92□□□□□ -1.94
ATXN3-248ENST00000558190 ZNF493Q6ZR52 646 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 MIA3Q5JRA6 1907 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 CFPP27918 469 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 CTRLP40313 264 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 C15orf32Q32M92 178 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 PVRIGQ6DKI7 326 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 RGPD3A6NKT7 1758 aaPredicted RBP2.92□□□□□ -1.94
ATXN3-248ENST00000558190 RGPD4Q7Z3J3 1758 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 PCOLCEQ15113 449 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 FER1L6Q2WGJ9 1857 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 ALKQ9UM73 1620 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 LINC00312Q9Y6C7 94 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 SCN8AQ9UQD0 1980 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 PRSS22Q9GZN4 317 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 ORMDL1Q9P0S3 153 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 RGPD8O14715 1765 aaPredicted RBP2.92□□□□□ -1.94
ATXN3-248ENST00000558190 BUB1B-PAK6H3BSN5 160 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 ATP5G1P05496 136 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 MYOFQ9NZM1 2061 aa2.92□□□□□ -1.94
ATXN3-248ENST00000558190 N4BP2Q86UW6 1770 aaPredicted RBP2.92□□□□□ -1.94
ATXN3-248ENST00000558190 TEX36Q5VZQ5 186 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 NFE4Q86UQ8 179 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 TMEM178BH3BS89 294 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 C1orf195Q5TG92 126 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 Q6ZT83 130 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 TRAV23DV6A0A075B6W5 121 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 SMIM26A0A096LP01 95 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 ZNRF2Q8NHG8 242 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 TRGV1A0A0A0MS02 117 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 F6UB75 175 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 RPS28P62857 69 aaKnown RBP2.91□□□□□ -1.94
ATXN3-248ENST00000558190 IGHV1-46P01743 117 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 SHISA2Q6UWI4 295 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 C11orf1Q9H5F2 150 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 C17orf100A8MU93 164 aa2.91□□□□□ -1.94
ATXN3-248ENST00000558190 UBE2E1P51965 193 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms