RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 KIR2DL5AQ8N109 375 aa9.19□□□□□ -0.94
SHMT2-221ENST00000555773 KIR2DL5BQ8NHK3 375 aa9.19□□□□□ -0.94
SHMT2-221ENST00000555773 ODF3Q96PU9 254 aa9.19□□□□□ -0.94
SHMT2-221ENST00000555773 VGLL1Q99990 258 aa9.19□□□□□ -0.94
SHMT2-221ENST00000555773 RPH3ALQ9UNE2 315 aa9.19□□□□□ -0.94
SHMT2-221ENST00000555773 KLF12Q9Y4X4 402 aa9.19□□□□□ -0.94
SHMT2-221ENST00000555773 LENEPQ9Y5L5 61 aa9.19□□□□□ -0.94
SHMT2-221ENST00000555773 IGKV2-40A0A087WW87 121 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-221ENST00000555773 RBMY1BA6NDE4 496 aaKnown RBP9.18□□□□□ -0.94
SHMT2-221ENST00000555773 RBMY1EA6NEQ0 496 aaKnown RBP9.18□□□□□ -0.94
SHMT2-221ENST00000555773 TMEM250H0YL14 139 aa9.18□□□□□ -0.94
SHMT2-221ENST00000555773 IGKV2D-40P01614 121 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-221ENST00000555773 RBMY1DP0C7P1 496 aaKnown RBP9.18□□□□□ -0.94
SHMT2-221ENST00000555773 ZNF138P52744 262 aa9.18□□□□□ -0.94
SHMT2-221ENST00000555773 ERCC8Q13216 396 aa9.18□□□□□ -0.94
SHMT2-221ENST00000555773 DEFB121Q5J5C9 76 aa9.18□□□□□ -0.94
SHMT2-221ENST00000555773 TOR2AQ5JU69 321 aa9.18□□□□□ -0.94
SHMT2-221ENST00000555773 TMEM75Q8N9X5 138 aa9.18□□□□□ -0.94
SHMT2-221ENST00000555773 C11orf52Q96A22 123 aa9.18□□□□□ -0.94
SHMT2-221ENST00000555773 CSTL1Q9H114 145 aa9.18□□□□□ -0.94
SHMT2-221ENST00000555773 MED9Q9NWA0 146 aa9.18□□□□□ -0.94
SHMT2-221ENST00000555773 ZNF492Q9P255 531 aa9.18□□□□□ -0.94
SHMT2-221ENST00000555773 DNAH3Q8TD57 4116 aa9.18□□□□□ -0.94
SHMT2-221ENST00000555773 TRBV6-1A0A0K0K1D8 114 aa9.17□□□□□ -0.94
SHMT2-221ENST00000555773 RAB19A4D1S5 217 aa9.17□□□□□ -0.94
SHMT2-221ENST00000555773 UBE2CO00762 179 aa9.17□□□□□ -0.94
SHMT2-221ENST00000555773 IGKV3-20P01619 116 aa9.17□□□□□ -0.94
SHMT2-221ENST00000555773 AMBPP02760 352 aa9.17□□□□□ -0.94
SHMT2-221ENST00000555773 CT45A10P0DMU9 189 aa9.17□□□□□ -0.94
SHMT2-221ENST00000555773 TSPOP30536 169 aa9.17□□□□□ -0.94
SHMT2-221ENST00000555773 APOC4P55056 127 aa9.17□□□□□ -0.94
SHMT2-221ENST00000555773 AMTNQ6UX39 209 aa9.17□□□□□ -0.94
SHMT2-221ENST00000555773 C2CD4CQ8TF44 421 aa9.17□□□□□ -0.94
SHMT2-221ENST00000555773 FMC1Q96HJ9 113 aa9.17□□□□□ -0.94
SHMT2-221ENST00000555773 PSG8Q9UQ74 426 aa9.17□□□□□ -0.94
SHMT2-221ENST00000555773 SCO2A0A1W2PP80 73 aa9.16□□□□□ -0.94
SHMT2-221ENST00000555773 IGLV2-11P01706 119 aa9.16□□□□□ -0.94
SHMT2-221ENST00000555773 RPL35AP18077 110 aaKnown RBP9.16□□□□□ -0.94
SHMT2-221ENST00000555773 LEPP41159 167 aa9.16□□□□□ -0.94
SHMT2-221ENST00000555773 AKR1C3P42330 323 aa9.16□□□□□ -0.94
SHMT2-221ENST00000555773 TAS2R60P59551 318 aa9.16□□□□□ -0.94
SHMT2-221ENST00000555773 UBE2G1P62253 170 aa9.16□□□□□ -0.94
SHMT2-221ENST00000555773 DEFA6Q01524 100 aa9.16□□□□□ -0.94
SHMT2-221ENST00000555773 FLI1Q01543 452 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-221ENST00000555773 TMEM183BQ1AE95 376 aa9.16□□□□□ -0.94
SHMT2-221ENST00000555773 SAPCD1Q5SSQ6 148 aa9.16□□□□□ -0.94
SHMT2-221ENST00000555773 FAM19A4Q96LR4 140 aa9.16□□□□□ -0.94
SHMT2-221ENST00000555773 LINC00479Q96M42 142 aa9.16□□□□□ -0.94
SHMT2-221ENST00000555773 C1QTNF4Q9BXJ3 329 aa9.16□□□□□ -0.94
SHMT2-221ENST00000555773 ZFP30Q9Y2G7 519 aa9.16□□□□□ -0.94
SHMT2-221ENST00000555773 FRMD6-AS1P0C7T7 363 aa9.15□□□□□ -0.94
SHMT2-221ENST00000555773 PRB4P10163 310 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-221ENST00000555773 CRISP2P16562 243 aa9.15□□□□□ -0.94
SHMT2-221ENST00000555773 MRAPQ8TCY5 172 aa9.15□□□□□ -0.94
SHMT2-221ENST00000555773 NDFIP1Q9BT67 221 aa9.15□□□□□ -0.94
SHMT2-221ENST00000555773 TRAV8-1A0A0A6YYK1 113 aa9.14□□□□□ -0.95
SHMT2-221ENST00000555773 TRAV34A0A0B4J273 112 aa9.14□□□□□ -0.95
SHMT2-221ENST00000555773 LINC00862A6NCI5 91 aa9.14□□□□□ -0.95
SHMT2-221ENST00000555773 SRP19P09132 144 aaKnown RBP9.14□□□□□ -0.95
SHMT2-221ENST00000555773 CDKN1BP46527 198 aa9.14□□□□□ -0.95
SHMT2-221ENST00000555773 PRNTQ86SH4 94 aa9.14□□□□□ -0.95
SHMT2-221ENST00000555773 SLC35B3Q9H1N7 401 aa9.14□□□□□ -0.95
SHMT2-221ENST00000555773 GIG44P09565 113 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-221ENST00000555773 RPL35P42766 123 aaKnown RBP9.13□□□□□ -0.95
SHMT2-221ENST00000555773 UQCC3Q6UW78 93 aa9.13□□□□□ -0.95
SHMT2-221ENST00000555773 Q6ZWC4 215 aa9.13□□□□□ -0.95
SHMT2-221ENST00000555773 BAGE2Q86Y30 109 aa9.13□□□□□ -0.95
SHMT2-221ENST00000555773 EIF4E3Q8N5X7 224 aaKnown RBP9.13□□□□□ -0.95
SHMT2-221ENST00000555773 SGK494Q96LW2 274 aa9.13□□□□□ -0.95
SHMT2-221ENST00000555773 TREM1Q9NP99 234 aa9.13□□□□□ -0.95
SHMT2-221ENST00000555773 KLLNB2CW77 178 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 M0R2Z0 102 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 CA1P00915 261 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-221ENST00000555773 LTAP01374 205 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 GPX1P07203 203 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 SRSF3P84103 164 aaKnown RBP9.12□□□□□ -0.95
SHMT2-221ENST00000555773 SPINK13Q1W4C9 94 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 COX8CQ7Z4L0 72 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 Q86TA4 180 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 ZFAND2AQ8N6M9 145 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 Q8TAT8 98 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 TVP23CQ96ET8 276 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 SMIM12Q96EX1 92 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 IGF2BP2-AS1Q96M15 143 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 C20orf144Q9BQM9 153 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 XCL2Q9UBD3 114 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 AGRNO00468 2067 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 FBN3Q75N90 2809 aa9.12□□□□□ -0.95
SHMT2-221ENST00000555773 C9JQL5 133 aa9.11□□□□□ -0.95
SHMT2-221ENST00000555773 CRXO43186 299 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-221ENST00000555773 FXYD7P58549 80 aa9.11□□□□□ -0.95
SHMT2-221ENST00000555773 FAM74A3Q4VXF1 159 aa9.11□□□□□ -0.95
SHMT2-221ENST00000555773 SMUG1Q53HV7 270 aa9.11□□□□□ -0.95
SHMT2-221ENST00000555773 TMEM183AQ8IXX5 376 aa9.11□□□□□ -0.95
SHMT2-221ENST00000555773 CSNK1G2-AS1Q8NCQ2 148 aa9.11□□□□□ -0.95
SHMT2-221ENST00000555773 DERL1Q9BUN8 251 aa9.11□□□□□ -0.95
SHMT2-221ENST00000555773 C7orf71A4D174 169 aa9.1□□□□□ -0.95
SHMT2-221ENST00000555773 C9JCJ5 164 aa9.1□□□□□ -0.95
SHMT2-221ENST00000555773 INSP01308 110 aa9.1□□□□□ -0.95
SHMT2-221ENST00000555773 RNASE4P34096 147 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms