RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 C11orf94C9JXX5 98 aa10.23□□□□□ -0.77
SPTLC2-202ENST00000554365 PRAC2D3DTV9 90 aa10.23□□□□□ -0.77
SPTLC2-202ENST00000554365 ZNF688P0C7X2 276 aa10.23□□□□□ -0.77
SPTLC2-202ENST00000554365 PRB4P10163 310 aaPredicted RBP10.23□□□□□ -0.77
SPTLC2-202ENST00000554365 DEFB1P60022 68 aa10.23□□□□□ -0.77
SPTLC2-202ENST00000554365 GNG5P63218 68 aa10.23□□□□□ -0.77
SPTLC2-202ENST00000554365 CST9LP1Q5W188 147 aa10.23□□□□□ -0.77
SPTLC2-202ENST00000554365 APRG1Q8IVJ8 170 aa10.23□□□□□ -0.77
SPTLC2-202ENST00000554365 RXFP4Q8TDU9 374 aa10.23□□□□□ -0.77
SPTLC2-202ENST00000554365 MRPL53Q96EL3 112 aaKnown RBP10.23□□□□□ -0.77
SPTLC2-202ENST00000554365 RAB19A4D1S5 217 aa10.22□□□□□ -0.77
SPTLC2-202ENST00000554365 TAGLN2P37802 199 aaKnown RBP10.22□□□□□ -0.77
SPTLC2-202ENST00000554365 ID1P41134 155 aa10.22□□□□□ -0.77
SPTLC2-202ENST00000554365 MEF2BQ02080 365 aaPredicted RBP10.22□□□□□ -0.77
SPTLC2-202ENST00000554365 ZNF124Q15973 351 aa10.22□□□□□ -0.77
SPTLC2-202ENST00000554365 C5orf17Q8NAS9 161 aa10.22□□□□□ -0.77
SPTLC2-202ENST00000554365 NKX6-2Q9C056 277 aaPredicted RBP10.22□□□□□ -0.77
SPTLC2-202ENST00000554365 AAMDCQ9H7C9 122 aa10.22□□□□□ -0.77
SPTLC2-202ENST00000554365 CLEC5AQ9NY25 188 aa10.22□□□□□ -0.77
SPTLC2-202ENST00000554365 PRELID1Q9Y255 219 aa10.22□□□□□ -0.77
SPTLC2-202ENST00000554365 SCO2A0A1W2PP80 73 aa10.21□□□□□ -0.77
SPTLC2-202ENST00000554365 SLC25A5P05141 298 aaKnown RBP10.21□□□□□ -0.77
SPTLC2-202ENST00000554365 NANOS2P60321 138 aaKnown RBP10.21□□□□□ -0.77
SPTLC2-202ENST00000554365 PSMG4Q5JS54 123 aa10.21□□□□□ -0.77
SPTLC2-202ENST00000554365 COMMD7Q86VX2 200 aa10.21□□□□□ -0.77
SPTLC2-202ENST00000554365 ARL6IP6Q8N6S5 226 aa10.21□□□□□ -0.77
SPTLC2-202ENST00000554365 C11orf45Q8TAV5 145 aa10.21□□□□□ -0.77
SPTLC2-202ENST00000554365 C11orf52Q96A22 123 aa10.21□□□□□ -0.77
SPTLC2-202ENST00000554365 LINC00052Q96N35 136 aa10.21□□□□□ -0.77
SPTLC2-202ENST00000554365 TXNDC17Q9BRA2 123 aa10.21□□□□□ -0.77
SPTLC2-202ENST00000554365 EPDR1Q9UM22 224 aa10.21□□□□□ -0.77
SPTLC2-202ENST00000554365 HECTD4Q9Y4D8 3996 aa10.21□□□□□ -0.78
SPTLC2-202ENST00000554365 DIRC3C9JPN6 131 aa10.2□□□□□ -0.78
SPTLC2-202ENST00000554365 AGRNO00468 2067 aa10.2□□□□□ -0.78
SPTLC2-202ENST00000554365 NDUFS6O75380 124 aaKnown RBP10.2□□□□□ -0.78
SPTLC2-202ENST00000554365 SRP19P09132 144 aaKnown RBP10.2□□□□□ -0.78
SPTLC2-202ENST00000554365 DEFB131AP59861 70 aa10.2□□□□□ -0.78
SPTLC2-202ENST00000554365 SNRPD3P62318 126 aaKnown RBP10.2□□□□□ -0.78
SPTLC2-202ENST00000554365 ZNF738Q8NE65 137 aa10.2□□□□□ -0.78
SPTLC2-202ENST00000554365 RPUSD4Q96CM3 377 aaKnown RBP10.2□□□□□ -0.78
SPTLC2-202ENST00000554365 EIF5A2Q9GZV4 153 aaKnown RBP10.2□□□□□ -0.78
SPTLC2-202ENST00000554365 CSTL1Q9H114 145 aa10.2□□□□□ -0.78
SPTLC2-202ENST00000554365 IGKV2-40A0A087WW87 121 aaPredicted RBP10.19□□□□□ -0.78
SPTLC2-202ENST00000554365 F6UB75 175 aa10.19□□□□□ -0.78
SPTLC2-202ENST00000554365 PEX7O00628 323 aa10.19□□□□□ -0.78
SPTLC2-202ENST00000554365 IGKV2D-40P01614 121 aaPredicted RBP10.19□□□□□ -0.78
SPTLC2-202ENST00000554365 TCRAP04437 139 aa10.19□□□□□ -0.78
SPTLC2-202ENST00000554365 GDF5OSQ5U4N7 250 aa10.19□□□□□ -0.78
SPTLC2-202ENST00000554365 EIF4E3Q8N5X7 224 aaKnown RBP10.19□□□□□ -0.78
SPTLC2-202ENST00000554365 C2CD4CQ8TF44 421 aa10.19□□□□□ -0.78
SPTLC2-202ENST00000554365 TCEAL7Q9BRU2 100 aa10.19□□□□□ -0.78
SPTLC2-202ENST00000554365 PCLOQ9Y6V0 5065 aa10.19□□□□□ -0.78
SPTLC2-202ENST00000554365 F6UZH7 168 aa10.18□□□□□ -0.78
SPTLC2-202ENST00000554365 PDE6DO43924 150 aa10.18□□□□□ -0.78
SPTLC2-202ENST00000554365 IGLV2-11P01706 119 aa10.18□□□□□ -0.78
SPTLC2-202ENST00000554365 PEA15Q15121 130 aa10.18□□□□□ -0.78
SPTLC2-202ENST00000554365 GOLT1AQ6ZVE7 132 aa10.18□□□□□ -0.78
SPTLC2-202ENST00000554365 OR11H2Q8NH07 326 aa10.18□□□□□ -0.78
SPTLC2-202ENST00000554365 CMTM2Q8TAZ6 248 aa10.18□□□□□ -0.78
SPTLC2-202ENST00000554365 LINC00479Q96M42 142 aa10.18□□□□□ -0.78
SPTLC2-202ENST00000554365 ATG101Q9BSB4 218 aa10.18□□□□□ -0.78
SPTLC2-202ENST00000554365 RPH3ALQ9UNE2 315 aa10.18□□□□□ -0.78
SPTLC2-202ENST00000554365 VPS13DQ5THJ4 4388 aa10.18□□□□□ -0.78
SPTLC2-202ENST00000554365 A0A0J9YX75 114 aa10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 KNCNA6PVL3 124 aa10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 TMEM250H0YL14 139 aa10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 DEFB4AO15263 64 aa10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 ZNF705DP0CH99 300 aaPredicted RBP10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 ZNF705BP0CI00 300 aaPredicted RBP10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 CMC4P56277 68 aaPredicted RBP10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 CYB561D1Q8N8Q1 229 aa10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 OR8A1Q8NGG7 326 aa10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 HIST1H2BAQ96A08 127 aa10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 VGLL1Q99990 258 aa10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 DERL1Q9BUN8 251 aa10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 C11orf68Q9H3H3 251 aaKnown RBP10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 SAV1Q9H4B6 383 aaPredicted RBP10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 SMDT1Q9H4I9 107 aa10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 KLF12Q9Y4X4 402 aa10.17□□□□□ -0.78
SPTLC2-202ENST00000554365 TRAV8-1A0A0A6YYK1 113 aa10.16□□□□□ -0.78
SPTLC2-202ENST00000554365 RBAKDNA6NC62 111 aa10.16□□□□□ -0.78
SPTLC2-202ENST00000554365 A8MTW9 85 aa10.16□□□□□ -0.78
SPTLC2-202ENST00000554365 NPIPB6E9PJ23 425 aa10.16□□□□□ -0.78
SPTLC2-202ENST00000554365 CA1P00915 261 aaPredicted RBP10.16□□□□□ -0.78
SPTLC2-202ENST00000554365 CSN1S1P47710 185 aa10.16□□□□□ -0.78
SPTLC2-202ENST00000554365 ERCC8Q13216 396 aa10.16□□□□□ -0.78
SPTLC2-202ENST00000554365 UQCC3Q6UW78 93 aa10.16□□□□□ -0.78
SPTLC2-202ENST00000554365 FOXI2Q6ZQN5 318 aa10.16□□□□□ -0.78
SPTLC2-202ENST00000554365 SLC7A5P1Q8MH63 180 aa10.16□□□□□ -0.78
SPTLC2-202ENST00000554365 TRAV34A0A0B4J273 112 aa10.15□□□□□ -0.78
SPTLC2-202ENST00000554365 SERTM2A0A1B0GWG4 89 aa10.15□□□□□ -0.78
SPTLC2-202ENST00000554365 HLA-DRB4P13762 266 aa10.15□□□□□ -0.78
SPTLC2-202ENST00000554365 C9orf47Q6ZRZ4 202 aa10.15□□□□□ -0.78
SPTLC2-202ENST00000554365 TMEM75Q8N9X5 138 aa10.15□□□□□ -0.78
SPTLC2-202ENST00000554365 SGK494Q96LW2 274 aa10.15□□□□□ -0.78
SPTLC2-202ENST00000554365 AGPAT4-IT1Q9H0P7 198 aa10.15□□□□□ -0.78
SPTLC2-202ENST00000554365 TREM1Q9NP99 234 aa10.15□□□□□ -0.78
SPTLC2-202ENST00000554365 HLA-DRB4X5D2U9 266 aa10.15□□□□□ -0.78
SPTLC2-202ENST00000554365 KIAA1109Q2LD37 5005 aa10.14□□□□□ -0.79
SPTLC2-202ENST00000554365 TRBV6-1A0A0K0K1D8 114 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms