RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 HTN3P15516 51 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 ATP6V0CP27449 155 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 CDKN1BP46527 198 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 HIST1H1AQ02539 215 aaPredicted RBP4.66□□□□□ -1.66
SLIRP-203ENST00000554074 KHDC3LQ587J8 217 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 SOHLH1Q5JUK2 328 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 LCE2CQ5TA81 110 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 IGFL4Q6B9Z1 124 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 RPL7L1Q6DKI1 246 aaKnown RBP4.66□□□□□ -1.66
SLIRP-203ENST00000554074 DPPA3Q6W0C5 159 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 PQLC2Q6ZP29 291 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 ZNF493Q6ZR52 646 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 TMUB2Q71RG4 321 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 BAP18Q8IXM2 172 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 LRRC20Q8TCA0 184 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 RPUSD4Q96CM3 377 aaKnown RBP4.66□□□□□ -1.66
SLIRP-203ENST00000554074 C16orf74Q96GX8 76 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 ZNF331Q9NQX6 463 aaPredicted RBP4.66□□□□□ -1.66
SLIRP-203ENST00000554074 CYTL1Q9NRR1 136 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 FUT9Q9Y231 359 aa4.66□□□□□ -1.66
SLIRP-203ENST00000554074 FAT2Q9NYQ8 4349 aa4.65□□□□□ -1.66
SLIRP-203ENST00000554074 TRAV12-2A0A075B6T6 113 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 A0A1W2PPV4 95 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 CBY3A6NI87 242 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 SMLR1H3BR10 107 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 H7BYZ3 331 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 M0R2N4 97 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 ATP5G1P05496 136 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 IGLC2P0DOY2 106 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 MED14OSP0DP75 135 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 HIST1H1EP10412 219 aaKnown RBP4.65□□□□□ -1.67
SLIRP-203ENST00000554074 AZU1P20160 251 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 ATP5G3P48201 142 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 RAB5CP51148 216 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 LGALSLQ3ZCW2 172 aaPredicted RBP4.65□□□□□ -1.67
SLIRP-203ENST00000554074 AKR1C8PQ5T2L2 129 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 SLC51BQ86UW2 128 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 LYPD1Q8N2G4 141 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 ARL6IP6Q8N6S5 226 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 HSD17B11Q8NBQ5 300 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 RNASE8Q8TDE3 154 aaKnown RBP4.65□□□□□ -1.67
SLIRP-203ENST00000554074 TMEM263Q8WUH6 116 aaKnown RBP4.65□□□□□ -1.67
SLIRP-203ENST00000554074 MRPL53Q96EL3 112 aaKnown RBP4.65□□□□□ -1.67
SLIRP-203ENST00000554074 PHYHIPLQ96FC7 376 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 ODF3Q96PU9 254 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 LINC01587Q99440 93 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 ZNF471Q9BX82 626 aaPredicted RBP4.65□□□□□ -1.67
SLIRP-203ENST00000554074 ACTR3CQ9C0K3 210 aaPredicted RBP4.65□□□□□ -1.67
SLIRP-203ENST00000554074 PPP1R14DQ9NXH3 145 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 PRELID1Q9Y255 219 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 TIMM8BQ9Y5J9 83 aaPredicted RBP4.65□□□□□ -1.67
SLIRP-203ENST00000554074 DNAH17Q9UFH2 4485 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 ABCA13Q86UQ4 5058 aa4.65□□□□□ -1.67
SLIRP-203ENST00000554074 A0A1B0GVG6 124 aa4.64□□□□□ -1.67
SLIRP-203ENST00000554074 PRM2P04554 102 aa4.64□□□□□ -1.67
SLIRP-203ENST00000554074 DEFB130BP0DP73 79 aa4.64□□□□□ -1.67
SLIRP-203ENST00000554074 DEFB130AP0DP74 79 aa4.64□□□□□ -1.67
SLIRP-203ENST00000554074 CDC34P49427 236 aaPredicted RBP4.64□□□□□ -1.67
SLIRP-203ENST00000554074 C4orf48Q5BLP8 95 aa4.64□□□□□ -1.67
SLIRP-203ENST00000554074 C1orf134Q5TEV5 83 aa4.64□□□□□ -1.67
SLIRP-203ENST00000554074 LINC00612Q8N6U2 182 aa4.64□□□□□ -1.67
SLIRP-203ENST00000554074 OR10G4Q8NGN3 311 aa4.64□□□□□ -1.67
SLIRP-203ENST00000554074 OR10G9Q8NGN4 311 aa4.64□□□□□ -1.67
SLIRP-203ENST00000554074 OR10G7Q8NGN6 311 aa4.64□□□□□ -1.67
SLIRP-203ENST00000554074 OR10J6PQ8NGY7 276 aa4.64□□□□□ -1.67
SLIRP-203ENST00000554074 SAT2Q96F10 170 aaPredicted RBP4.64□□□□□ -1.67
SLIRP-203ENST00000554074 ZNF503Q96F45 646 aa4.64□□□□□ -1.67
SLIRP-203ENST00000554074 PAXXQ9BUH6 204 aa4.64□□□□□ -1.67
SLIRP-203ENST00000554074 OR51M1Q9H341 326 aa4.64□□□□□ -1.67
SLIRP-203ENST00000554074 IGLV2-18A0A075B6J9 118 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 TRBV19A0A075B6N1 114 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 CTXND1A0A1B0GTU2 59 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 NPIPB6E9PJ23 425 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 F5H768 121 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 H3BQ15 152 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 SLC17A3O00476 420 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 CXorf1O96002 111 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 NBEAP1P0C6P0 100 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 STAG3L2P0CL84 134 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 STAG3L3P0CL85 134 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 CCL18P55774 89 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 FAM74A1Q5RGS3 127 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 MORN5Q5VZ52 161 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 CCDC28AQ8IWP9 274 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 C9orf62Q8N4C0 152 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 ZNRF2Q8NHG8 242 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 SUN5Q8TC36 379 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 RNF141Q8WVD5 230 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 FAM167A-AS1Q96KT0 104 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 ATG101Q9BSB4 218 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 SLC25A2Q9BXI2 301 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 NKX6-2Q9C056 277 aaPredicted RBP4.63□□□□□ -1.67
SLIRP-203ENST00000554074 AAMDCQ9H7C9 122 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 TMEM167BQ9NRX6 74 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 ARL2-SNX15V9GYD0 113 aa4.63□□□□□ -1.67
SLIRP-203ENST00000554074 DNAH2Q9P225 4427 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 PKD1P98161 4303 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 NBDYA0A0U1RRE5 68 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 H3BNG1 76 aa4.62□□□□□ -1.67
SLIRP-203ENST00000554074 TEX46H3BTG2 121 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms