RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 GNRH2O43555 120 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 HLA-DRB1P01911 266 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 IDO1P14902 403 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 KRTAP10-10P60014 251 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 TNFRSF9Q07011 255 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 FOXF1Q12946 379 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 DEFB113Q30KQ7 82 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 NCMAPQ5T1S8 102 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 LPCAT3Q6P1A2 487 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 C2orf91Q6ZV80 131 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 SSX8Q7RTT4 187 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 GRINAQ7Z429 371 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 NMNAT3Q96T66 252 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 TPT1P8Q9HAU6 139 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 SLC35A3Q9Y2D2 325 aa2.33□□□□□ -2.04
PABPN1-204ENST00000554062 MEGF8Q7Z7M0 2845 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 ARHGAP32A7KAX9 2087 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 A0A087WUJ7 227 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 DPRXA6NFQ7 191 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 EDF1O60869 148 aaKnown RBP2.32□□□□□ -2.04
PABPN1-204ENST00000554062 ZNF728P0DKX0 622 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 S100A7P31151 101 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 S100A3P33764 101 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 FUSP35637 526 aaKnown RBP eCLIP2.32□□□□□ -2.04
PABPN1-204ENST00000554062 SNRPD2P62316 118 aaKnown RBP2.32□□□□□ -2.04
PABPN1-204ENST00000554062 CDK10Q15131 360 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 C3orf33Q6P1S2 294 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 DHRS4L2Q6PKH6 230 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 Q6ZS49 121 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 WFDC11Q8NEX6 87 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 OR4D11Q8NGI4 311 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 OR4X1Q8NH49 305 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 MCFD2Q8NI22 146 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 SLC7A6Q92536 515 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 DNAJC30Q96LL9 226 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 LINC00470Q9BZP3 86 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 DPY30Q9C005 99 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 MINOS1-NBL1R4GNA1 71 aa2.32□□□□□ -2.04
PABPN1-204ENST00000554062 TMEM269A0A1B0GVZ9 245 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 IRGMA1A4Y4 181 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 OR4C46A6NHA9 309 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 LY6LH3BQJ8 138 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 TPST1O60507 370 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 DBIP07108 87 aaKnown RBP2.31□□□□□ -2.04
PABPN1-204ENST00000554062 UQCRHP07919 91 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 ASAH2BP0C7U1 165 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 POLR2HP52434 150 aaKnown RBP2.31□□□□□ -2.04
PABPN1-204ENST00000554062 POLR2JP52435 117 aaKnown RBP2.31□□□□□ -2.04
PABPN1-204ENST00000554062 KRTAP10-8P60410 259 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 GUK1Q16774 197 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 LYZL1Q6UWQ5 148 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 ANKRD29Q8N6D5 301 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 ZNF283Q8N7M2 679 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 MRPL30Q8TCC3 161 aaKnown RBP2.31□□□□□ -2.04
PABPN1-204ENST00000554062 Q9BRP9 147 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 SAR1AQ9NR31 198 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 CALML5Q9NZT1 146 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 SAMHD1Q9Y3Z3 626 aaKnown RBP2.31□□□□□ -2.04
PABPN1-204ENST00000554062 TIMM9Q9Y5J7 89 aa2.31□□□□□ -2.04
PABPN1-204ENST00000554062 TANC2Q9HCD6 1990 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 STARD9Q9P2P6 4700 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 TGP01266 2768 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 IGHV3-64A0A075B6Q5 118 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 MUC21A0A0G2JKD1 596 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 MUC21A0A140T8X8 626 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 A0A1B0GWA3 101 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 C11orf86A6NJI1 115 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 I3L521 148 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 OR7C1O76099 320 aaPredicted RBP2.3□□□□□ -2.04
PABPN1-204ENST00000554062 SERPINA1P01009 418 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 IFNA10P01566 189 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 PPIBP23284 216 aaKnown RBP2.3□□□□□ -2.04
PABPN1-204ENST00000554062 NFYAP23511 347 aaPredicted RBP2.3□□□□□ -2.04
PABPN1-204ENST00000554062 S100A5P33763 92 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 CCL20P78556 96 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 CDK6Q00534 326 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 LIN52Q52LA3 116 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 IBA57Q5T440 356 aaKnown RBP2.3□□□□□ -2.04
PABPN1-204ENST00000554062 BRD3OSQ6XYD6 125 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 OR8J3Q8NGG0 315 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 CDC26Q8NHZ8 85 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 C10orf82Q8WW14 230 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 CGREF1Q99674 301 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 NIPSNAP1Q9BPW8 284 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 WDR61Q9GZS3 305 aaKnown RBP2.3□□□□□ -2.04
PABPN1-204ENST00000554062 PRELID3BQ9Y3B1 194 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 TMEM56-RWDD3S4R434 201 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 VPS13DQ5THJ4 4388 aa2.3□□□□□ -2.04
PABPN1-204ENST00000554062 IGLV3-9A0A075B6K5 115 aa2.29□□□□□ -2.04
PABPN1-204ENST00000554062 TRAV36DV7A0A075B6V5 113 aa2.29□□□□□ -2.04
PABPN1-204ENST00000554062 IGHV1-18A0A0C4DH31 117 aa2.29□□□□□ -2.04
PABPN1-204ENST00000554062 OR2T1O43869 369 aa2.29□□□□□ -2.04
PABPN1-204ENST00000554062 CRYZL1O95825 349 aa2.29□□□□□ -2.04
PABPN1-204ENST00000554062 PRM2P04554 102 aa2.29□□□□□ -2.04
PABPN1-204ENST00000554062 EVX1P49640 407 aa2.29□□□□□ -2.04
PABPN1-204ENST00000554062 ZNF90Q03938 601 aa2.29□□□□□ -2.04
PABPN1-204ENST00000554062 RPL18Q07020 188 aaKnown RBP2.29□□□□□ -2.04
PABPN1-204ENST00000554062 C10orf128Q5T292 105 aa2.29□□□□□ -2.04
PABPN1-204ENST00000554062 C1orf140Q5VVS0 124 aa2.29□□□□□ -2.04
PABPN1-204ENST00000554062 RPL22L1Q6P5R6 122 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms