RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 PRSS22Q9GZN4 317 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 PARP14Q460N5 1801 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 TOMM7Q9P0U1 55 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 MDFICQ9P1T7 246 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 CRIP2P52943 208 aaPredicted RBP7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 CCL8P80075 99 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 MRPL51Q4U2R6 128 aaKnown RBP7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 LINC00643Q86TS7 51 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 RPS19BP1Q86WX3 136 aaKnown RBP7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 DOCK1Q14185 1865 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 ATP5G1P05496 136 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 COL8A2P25067 703 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 METRNQ9UJH8 293 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 SDK2Q58EX2 2172 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 C12orf77C9JDV5 145 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 FAM90A13PP0C7W8 464 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 HAMPP81172 84 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 C20orf204Q6ZNR8 217 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 ZNF329Q86UD4 541 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 CCL17Q92583 94 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 EXPH5Q8NEV8 1989 aa7.17□□□□□ -1.26
GTF2A1-203ENST00000553612 CEP290O15078 2479 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 NDUFA11Q86Y39 141 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 PRR19A6NJB7 356 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 ACYP1P07311 99 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 SUMO2P61956 95 aaKnown RBP7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 SS18Q15532 418 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 SLC25A47Q6Q0C1 308 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 FAM110DQ8TAY7 271 aaPredicted RBP7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 ZNRF1Q8ND25 227 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 SLC50A1Q9BRV3 221 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 PRR14LQ5THK1 2151 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 ECSCRQ19T08 205 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 C6orf226Q5I0X4 101 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 PMS2CLQ68D20 193 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 CD177Q8N6Q3 437 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 FAM19A4Q96LR4 140 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 COL24A1Q17RW2 1714 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 C8orf49Q96NF6 230 aa7.16□□□□□ -1.26
GTF2A1-203ENST00000553612 FAM120AOSQ5T036 256 aa7.15□□□□□ -1.26
GTF2A1-203ENST00000553612 SLC25A45Q8N413 288 aa7.15□□□□□ -1.26
GTF2A1-203ENST00000553612 C9orf85Q96MD7 179 aa7.15□□□□□ -1.26
GTF2A1-203ENST00000553612 RALGAPA2Q2PPJ7 1873 aa7.15□□□□□ -1.26
GTF2A1-203ENST00000553612 SERP2Q8N6R1 65 aa7.15□□□□□ -1.26
GTF2A1-203ENST00000553612 FDCSPQ8NFU4 85 aa7.15□□□□□ -1.26
GTF2A1-203ENST00000553612 SMIM26A0A096LP01 95 aa7.15□□□□□ -1.26
GTF2A1-203ENST00000553612 J3QT63 122 aa7.15□□□□□ -1.26
GTF2A1-203ENST00000553612 C10orf55Q5SWW7 151 aa7.15□□□□□ -1.26
GTF2A1-203ENST00000553612 DAZ4Q86SG3 579 aaKnown RBP7.15□□□□□ -1.26
GTF2A1-203ENST00000553612 FAM223AQ8IWN6 122 aa7.15□□□□□ -1.26
GTF2A1-203ENST00000553612 DAZ1Q9NQZ3 744 aaKnown RBP7.15□□□□□ -1.26
GTF2A1-203ENST00000553612 TPSG1Q9NRR2 321 aa7.15□□□□□ -1.26
GTF2A1-203ENST00000553612 AHDC1Q5TGY3 1603 aaPredicted RBP7.15□□□□□ -1.27
GTF2A1-203ENST00000553612 BAALC-AS2P0C853 105 aa7.15□□□□□ -1.27
GTF2A1-203ENST00000553612 Q8IYB0 196 aa7.15□□□□□ -1.27
GTF2A1-203ENST00000553612 ELSPBP1Q96BH3 223 aa7.15□□□□□ -1.27
GTF2A1-203ENST00000553612 H3BS24 57 aa7.15□□□□□ -1.27
GTF2A1-203ENST00000553612 CCL1P22362 96 aa7.15□□□□□ -1.27
GTF2A1-203ENST00000553612 PSMB8P28062 276 aa7.15□□□□□ -1.27
GTF2A1-203ENST00000553612 C10orf128Q5T292 105 aa7.15□□□□□ -1.27
GTF2A1-203ENST00000553612 RNF166Q96A37 237 aaPredicted RBP7.15□□□□□ -1.27
GTF2A1-203ENST00000553612 CCL3P10147 92 aa7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 TEX36Q5VZQ5 186 aa7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 PRSS46E5RG02 174 aa7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 FOXS1O43638 330 aa7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 GATA1P15976 413 aaPredicted RBP7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 CCL13Q99616 98 aa7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 ANK1P16157 1881 aa7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 BTAF1O14981 1849 aa7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 MED13Q9UHV7 2174 aa7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 RSPO1Q2MKA7 263 aaPredicted RBP7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 GREB1Q4ZG55 1949 aa7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 A0A087WVE0 104 aa7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 BUB3O43684 328 aa7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 SPINK14Q6IE38 97 aa7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 TIMM17AQ99595 171 aa7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 PROK2Q9HC23 129 aa7.14□□□□□ -1.27
GTF2A1-203ENST00000553612 HOXD3P31249 432 aaPredicted RBP7.13□□□□□ -1.27
GTF2A1-203ENST00000553612 TDHQ8IZJ6 230 aa7.13□□□□□ -1.27
GTF2A1-203ENST00000553612 PLEKHB2Q96CS7 222 aa7.13□□□□□ -1.27
GTF2A1-203ENST00000553612 SHANK1Q9Y566 2161 aa7.13□□□□□ -1.27
GTF2A1-203ENST00000553612 LINC00114Q6XXX2 140 aa7.13□□□□□ -1.27
GTF2A1-203ENST00000553612 CXCL12P48061 93 aa7.13□□□□□ -1.27
GTF2A1-203ENST00000553612 SMCPP49901 116 aaPredicted RBP7.13□□□□□ -1.27
GTF2A1-203ENST00000553612 NBR2O15453 112 aa7.13□□□□□ -1.27
GTF2A1-203ENST00000553612 CXCL5P42830 114 aa7.13□□□□□ -1.27
GTF2A1-203ENST00000553612 FAM104BQ5XKR9 115 aa7.13□□□□□ -1.27
GTF2A1-203ENST00000553612 ODF3L1Q8IXM7 274 aa7.13□□□□□ -1.27
GTF2A1-203ENST00000553612 WFDC9Q8NEX5 89 aa7.13□□□□□ -1.27
GTF2A1-203ENST00000553612 SLC22A18ASQ8N1D0 253 aa7.13□□□□□ -1.27
GTF2A1-203ENST00000553612 C11orf44Q8N8P7 122 aa7.13□□□□□ -1.27
GTF2A1-203ENST00000553612 ZNF831Q5JPB2 1677 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 SOCS3O14543 225 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 RPL18AQ02543 176 aaKnown RBP7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 FHL1Q13642 323 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 MUSTN1Q8IVN3 82 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 MRPL53Q96EL3 112 aaKnown RBP7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 COX14Q96I36 57 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 ICOSQ9Y6W8 199 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 GOLGB1Q14789 3259 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms